BLASTX nr result

ID: Coptis25_contig00009566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009566
         (1439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19198.3| unnamed protein product [Vitis vinifera]              453   e-131
ref|XP_002306565.1| predicted protein [Populus trichocarpa] gi|2...   439   e-123
gb|AFF18848.1| APX [Dimocarpus longan]                                437   e-123
ref|XP_003615163.1| hypothetical protein MTR_5g064610 [Medicago ...   430   e-120
ref|XP_003519178.1| PREDICTED: thylakoid lumenal 29 kDa protein,...   425   e-120

>emb|CBI19198.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  453 bits (1165), Expect(2) = e-131
 Identities = 223/275 (81%), Positives = 250/275 (90%)
 Frame = -2

Query: 1108 IISLGASTEMACAADLIQRRQRSVFQSDVKNSLYNAIKVKPELIPSILMLAVNDIMTYDK 929
            + S G   EMA AADLIQ RQRS F+S+VK +L+ AIK  P++IPS+L LA+ND MTYDK
Sbjct: 65   LASSGPFVEMAAAADLIQLRQRSEFRSNVKGTLFTAIKGNPDIIPSLLTLALNDAMTYDK 124

Query: 928  ATKSGGPNGSICFSSEISRPENQGLSAVLNFLEEVKKEIDSNSKGGPISFADLIQCAAQS 749
            ATKSGGPNGSI FSSEISRPEN+GLSA LN LEE KKEIDS SKGGPISFADLIQ AAQS
Sbjct: 125  ATKSGGPNGSIRFSSEISRPENKGLSAALNLLEESKKEIDSYSKGGPISFADLIQYAAQS 184

Query: 748  ALKRTFLASAIRKCGGNEEKGNLVYTAYGSNGQWGLFDREFGRADSQEPDPEGRVPQWEK 569
            A+K TF+ASA+RKCGGNEEKGNL+YTAYGSNGQWGLFD++FGRAD+QEPDPEGRVPQWEK
Sbjct: 185  AVKSTFIASAVRKCGGNEEKGNLLYTAYGSNGQWGLFDKQFGRADTQEPDPEGRVPQWEK 244

Query: 568  ASVQEMKDKFSAVGLGPRQLAVMSAFLGPDQVAVESLLASDPEVTPWVKKYQRSRETVSE 389
            ASVQEMKDKF+AVG GPRQLAVMSAFLGPDQ+A E+LLA+DP+V PWV+KYQRSRETVS+
Sbjct: 245  ASVQEMKDKFTAVGFGPRQLAVMSAFLGPDQLASEALLATDPDVAPWVQKYQRSRETVSQ 304

Query: 388  TDYQVDLINTLTKLSCLGQQINYEAYTYPVKKVDF 284
            TDY+VDLI TLTKLSCLGQQINYEAY+YPV+KVDF
Sbjct: 305  TDYEVDLITTLTKLSCLGQQINYEAYSYPVQKVDF 339



 Score = 45.1 bits (105), Expect(2) = e-131
 Identities = 21/38 (55%), Positives = 23/38 (60%)
 Frame = -1

Query: 1295 HSYSPGNICCRKTEALVFQEAGFTRRDILKCVGATFGM 1182
            HS   G I C + E     E GF RRD+LKCVGAT GM
Sbjct: 25   HSLQAGRIRCNRIECNGTDEDGFRRRDVLKCVGATLGM 62


>ref|XP_002306565.1| predicted protein [Populus trichocarpa] gi|222856014|gb|EEE93561.1|
            predicted protein [Populus trichocarpa]
          Length = 332

 Score =  439 bits (1129), Expect(2) = e-123
 Identities = 214/274 (78%), Positives = 246/274 (89%)
 Frame = -2

Query: 1108 IISLGASTEMACAADLIQRRQRSVFQSDVKNSLYNAIKVKPELIPSILMLAVNDIMTYDK 929
            + S G+  EMA AADLIQRRQRS FQS ++ +L+ AIK KPEL+P IL LA+ND +TYDK
Sbjct: 53   LASSGSFVEMASAADLIQRRQRSEFQSSIRQTLFAAIKGKPELVPYILTLALNDAITYDK 112

Query: 928  ATKSGGPNGSICFSSEISRPENQGLSAVLNFLEEVKKEIDSNSKGGPISFADLIQCAAQS 749
            ATKSGGPNGSI FSSEISRPEN+GLSA LN +EE K+EIDS SKGGPISFADLI  A QS
Sbjct: 113  ATKSGGPNGSIRFSSEISRPENKGLSAALNLIEEAKEEIDSYSKGGPISFADLIPYAGQS 172

Query: 748  ALKRTFLASAIRKCGGNEEKGNLVYTAYGSNGQWGLFDREFGRADSQEPDPEGRVPQWEK 569
            A+K TFLASAIRKCGGNE+KG+L+Y+AYGS+GQWGLFDR+FGR DSQEPDPEGRVPQWEK
Sbjct: 173  AVKATFLASAIRKCGGNEQKGSLLYSAYGSSGQWGLFDRQFGRTDSQEPDPEGRVPQWEK 232

Query: 568  ASVQEMKDKFSAVGLGPRQLAVMSAFLGPDQVAVESLLASDPEVTPWVKKYQRSRETVSE 389
            A+VQEMKDKFS++G GPRQLAVMSAFLGPDQ A E+LLA+DP+VTPWV+KYQRSRETVS+
Sbjct: 233  ATVQEMKDKFSSIGFGPRQLAVMSAFLGPDQAATEALLATDPDVTPWVQKYQRSRETVSQ 292

Query: 388  TDYQVDLINTLTKLSCLGQQINYEAYTYPVKKVD 287
            TDY+VDLI TLTKLS +GQQINYEAYTYPV+K++
Sbjct: 293  TDYEVDLITTLTKLSSMGQQINYEAYTYPVRKIE 326



 Score = 30.0 bits (66), Expect(2) = e-123
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -1

Query: 1274 ICCRKTEALVFQEAGFTRRDILKCVGATFGM 1182
            I C K +  V  E    RR++LKC GAT GM
Sbjct: 20   IRCHKMDTDVPGENVLRRREVLKCFGATVGM 50


>gb|AFF18848.1| APX [Dimocarpus longan]
          Length = 341

 Score =  437 bits (1123), Expect(2) = e-123
 Identities = 217/272 (79%), Positives = 244/272 (89%)
 Frame = -2

Query: 1102 SLGASTEMACAADLIQRRQRSVFQSDVKNSLYNAIKVKPELIPSILMLAVNDIMTYDKAT 923
            S G+  EMA AADLIQRRQRS F S+VK +L  AIK KPELIPS+L LA+ND MTYDKAT
Sbjct: 64   SSGSFVEMASAADLIQRRQRSEFLSNVKGTLQIAIKGKPELIPSLLTLALNDSMTYDKAT 123

Query: 922  KSGGPNGSICFSSEISRPENQGLSAVLNFLEEVKKEIDSNSKGGPISFADLIQCAAQSAL 743
            KSGGPNGS+ FSSEISRPEN+GLSA L+ LEEVKKEIDS SKGGPI++ADLIQ AAQSA 
Sbjct: 124  KSGGPNGSVRFSSEISRPENKGLSAALDSLEEVKKEIDSYSKGGPIAYADLIQYAAQSAA 183

Query: 742  KRTFLASAIRKCGGNEEKGNLVYTAYGSNGQWGLFDREFGRADSQEPDPEGRVPQWEKAS 563
            K TFLASAIRKCGGNEEKG L+YTAYGSNGQWGLFDR+FGR D+ EPDPEGR+PQWEKA+
Sbjct: 184  KATFLASAIRKCGGNEEKGRLLYTAYGSNGQWGLFDRQFGRTDALEPDPEGRIPQWEKAT 243

Query: 562  VQEMKDKFSAVGLGPRQLAVMSAFLGPDQVAVESLLASDPEVTPWVKKYQRSRETVSETD 383
            VQEMKDKF+A+G GPRQLAVMSAFLGPDQ A E+LLA+D +V+PWV+KYQRSRETVS+TD
Sbjct: 244  VQEMKDKFTAIGFGPRQLAVMSAFLGPDQAATEALLATDKDVSPWVEKYQRSRETVSQTD 303

Query: 382  YQVDLINTLTKLSCLGQQINYEAYTYPVKKVD 287
            Y+VDLI TLTKLS LGQQINYEAYTYPV+K++
Sbjct: 304  YEVDLITTLTKLSSLGQQINYEAYTYPVRKIE 335



 Score = 32.0 bits (71), Expect(2) = e-123
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -1

Query: 1286 SPGNICCRKTEALVFQEAGFTRRDILKCVGATFGM 1182
            S G I CRK +     +    RR+IL CVGAT GM
Sbjct: 29   SVGVIRCRKVDT----DVSLHRREILNCVGATIGM 59


>ref|XP_003615163.1| hypothetical protein MTR_5g064610 [Medicago truncatula]
            gi|355516498|gb|AES98121.1| hypothetical protein
            MTR_5g064610 [Medicago truncatula]
          Length = 353

 Score =  430 bits (1105), Expect(2) = e-120
 Identities = 214/274 (78%), Positives = 237/274 (86%)
 Frame = -2

Query: 1108 IISLGASTEMACAADLIQRRQRSVFQSDVKNSLYNAIKVKPELIPSILMLAVNDIMTYDK 929
            I S G+    A AADLI+RRQRS FQS +K +LY AIK  P+L PSIL LA+ND +TYDK
Sbjct: 74   ISSSGSLLGTANAADLIERRQRSDFQSQIKGTLYTAIKANPDLTPSILTLALNDALTYDK 133

Query: 928  ATKSGGPNGSICFSSEISRPENQGLSAVLNFLEEVKKEIDSNSKGGPISFADLIQCAAQS 749
            ATK+GGPNGSI FSSEISRPEN+GLSA LNF+EE KKEIDS SKGGPIS+ADLIQ AAQS
Sbjct: 134  ATKTGGPNGSIRFSSEISRPENKGLSAALNFIEEAKKEIDSYSKGGPISYADLIQYAAQS 193

Query: 748  ALKRTFLASAIRKCGGNEEKGNLVYTAYGSNGQWGLFDREFGRADSQEPDPEGRVPQWEK 569
            A K  FLASAIRKCGGNEEKGNL+YTAYGSNGQWGLFDR+FGR D+ E DPEGR+P WEK
Sbjct: 194  ATKAQFLASAIRKCGGNEEKGNLLYTAYGSNGQWGLFDRQFGRTDTDEADPEGRIPLWEK 253

Query: 568  ASVQEMKDKFSAVGLGPRQLAVMSAFLGPDQVAVESLLASDPEVTPWVKKYQRSRETVSE 389
            ASVQEMKDKFSAVG GPRQLAV+SAF+GPDQ A E+LLASDP+V PWV+KYQRSRETVS 
Sbjct: 254  ASVQEMKDKFSAVGFGPRQLAVLSAFIGPDQDATETLLASDPDVAPWVQKYQRSRETVSR 313

Query: 388  TDYQVDLINTLTKLSCLGQQINYEAYTYPVKKVD 287
            TDY+VDLI T TKLS LGQ+INYEAYTYP KK+D
Sbjct: 314  TDYEVDLITTFTKLSTLGQKINYEAYTYPRKKID 347



 Score = 31.6 bits (70), Expect(2) = e-120
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
 Frame = -1

Query: 1277 NICCRKTEALVFQEAG----FTRRDILKCVGATFGM 1182
            +ICC K +  V  E      + RRD+LKC+G T G+
Sbjct: 36   SICCAKIKTDVSDEEEQFFHWRRRDVLKCIGLTIGL 71


>ref|XP_003519178.1| PREDICTED: thylakoid lumenal 29 kDa protein, chloroplastic-like
            [Glycine max]
          Length = 347

 Score =  425 bits (1093), Expect(2) = e-120
 Identities = 212/272 (77%), Positives = 234/272 (86%)
 Frame = -2

Query: 1102 SLGASTEMACAADLIQRRQRSVFQSDVKNSLYNAIKVKPELIPSILMLAVNDIMTYDKAT 923
            S G+  EMA AADLIQRRQRS FQS +K +L+ AIK  P+LIPS+L LA+ND +TYDKAT
Sbjct: 70   SSGSLVEMANAADLIQRRQRSEFQSKIKETLFTAIKGNPDLIPSLLTLALNDALTYDKAT 129

Query: 922  KSGGPNGSICFSSEISRPENQGLSAVLNFLEEVKKEIDSNSKGGPISFADLIQCAAQSAL 743
            KSGGPNGSI FSSEI RPEN GLSA LN LEE KKEIDS+SKGG IS+ADLI  AAQSA 
Sbjct: 130  KSGGPNGSIRFSSEIGRPENTGLSAALNLLEEAKKEIDSDSKGGSISYADLIHIAAQSAA 189

Query: 742  KRTFLASAIRKCGGNEEKGNLVYTAYGSNGQWGLFDREFGRADSQEPDPEGRVPQWEKAS 563
            K TFLA+AIRKCGG EEKG  +Y AYGSNGQWGLFDR+FGRAD+Q+PDPEGRVP WEKAS
Sbjct: 190  KATFLAAAIRKCGGKEEKGKTLYNAYGSNGQWGLFDRQFGRADAQDPDPEGRVPLWEKAS 249

Query: 562  VQEMKDKFSAVGLGPRQLAVMSAFLGPDQVAVESLLASDPEVTPWVKKYQRSRETVSETD 383
            VQEMKDKF AVG GPRQLAV+SAFLGPDQ A E+LLASDP+V PWV+KYQRSRETVS+TD
Sbjct: 250  VQEMKDKFVAVGFGPRQLAVLSAFLGPDQNATETLLASDPDVAPWVQKYQRSRETVSQTD 309

Query: 382  YQVDLINTLTKLSCLGQQINYEAYTYPVKKVD 287
            Y+VDLI T TKLS LGQQINYEAYTYP  K+D
Sbjct: 310  YEVDLITTFTKLSTLGQQINYEAYTYPPPKID 341



 Score = 33.5 bits (75), Expect(2) = e-120
 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = -1

Query: 1277 NICCRKTEALVFQEAGF--TRRDILKCVGATFGM 1182
            +ICC KT + V     F   RRD+LKC GAT G+
Sbjct: 32   SICCNKTISDVSDGEPFHWRRRDVLKCAGATVGL 65


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