BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009534
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275157.2| PREDICTED: reticulon-like protein B16-like [...   114   8e-24
ref|XP_002520859.1| conserved hypothetical protein [Ricinus comm...   108   3e-22
ref|NP_001078133.1| reticulon-like protein B16 [Arabidopsis thal...   107   8e-22
ref|NP_850557.2| reticulon-like protein B16 [Arabidopsis thalian...   107   8e-22
ref|NP_974275.1| reticulon-like protein B16 [Arabidopsis thalian...   107   8e-22

>ref|XP_002275157.2| PREDICTED: reticulon-like protein B16-like [Vitis vinifera]
           gi|297736488|emb|CBI25359.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/89 (64%), Positives = 67/89 (75%)
 Frame = +1

Query: 55  DGVNEDCTSAAYRLFDRQRPMHQIMGGGKAADVIMWKRWRVSVGIIVVATIAWLVFEWSE 234
           DG         YRLFDR+  +HQIMGGGKAADV++WKR RVS G IVVAT+AW++FE S 
Sbjct: 13  DGDASTSGGPGYRLFDRRSSIHQIMGGGKAADVLLWKRRRVSCGTIVVATVAWILFERSG 72

Query: 235 LSFLSISSDVLLVTVVIQFLRANLATLRN 321
           LSFLSI SDVLL+ +V+ FLRAN A  RN
Sbjct: 73  LSFLSICSDVLLILIVVLFLRANYAAFRN 101


>ref|XP_002520859.1| conserved hypothetical protein [Ricinus communis]
           gi|223539990|gb|EEF41568.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score =  108 bits (271), Expect = 3e-22
 Identities = 49/82 (59%), Positives = 62/82 (75%)
 Frame = +1

Query: 76  TSAAYRLFDRQRPMHQIMGGGKAADVIMWKRWRVSVGIIVVATIAWLVFEWSELSFLSIS 255
           +S+ YRLF RQ P  Q MGGGKAADV++WKRW VS  +I++AT+AW +FE S L FL+I 
Sbjct: 30  SSSRYRLFGRQAPFQQFMGGGKAADVLLWKRWHVSFSVIIIATVAWFIFERSGLPFLTIC 89

Query: 256 SDVLLVTVVIQFLRANLATLRN 321
           SDVLLV  V+ F+ AN A +RN
Sbjct: 90  SDVLLVVTVLLFIHANFAAIRN 111


>ref|NP_001078133.1| reticulon-like protein B16 [Arabidopsis thaliana]
           gi|332641453|gb|AEE74974.1| reticulon-like protein B16
           [Arabidopsis thaliana]
          Length = 227

 Score =  107 bits (268), Expect = 8e-22
 Identities = 47/89 (52%), Positives = 70/89 (78%)
 Frame = +1

Query: 55  DGVNEDCTSAAYRLFDRQRPMHQIMGGGKAADVIMWKRWRVSVGIIVVATIAWLVFEWSE 234
           DG NE  +S+ YRL  RQ  +HQ MGGGKAAD+++W+R  +S+G+I+++T+AWL+FE+S 
Sbjct: 12  DGRNEGGSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSG 71

Query: 235 LSFLSISSDVLLVTVVIQFLRANLATLRN 321
           L FLS+SSDVLL+ ++I F+ A ++  RN
Sbjct: 72  LPFLSVSSDVLLIVIMISFVHARVSAFRN 100


>ref|NP_850557.2| reticulon-like protein B16 [Arabidopsis thaliana]
           gi|332641450|gb|AEE74971.1| reticulon-like protein B16
           [Arabidopsis thaliana]
          Length = 162

 Score =  107 bits (268), Expect = 8e-22
 Identities = 47/89 (52%), Positives = 70/89 (78%)
 Frame = +1

Query: 55  DGVNEDCTSAAYRLFDRQRPMHQIMGGGKAADVIMWKRWRVSVGIIVVATIAWLVFEWSE 234
           DG NE  +S+ YRL  RQ  +HQ MGGGKAAD+++W+R  +S+G+I+++T+AWL+FE+S 
Sbjct: 12  DGRNEGGSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSG 71

Query: 235 LSFLSISSDVLLVTVVIQFLRANLATLRN 321
           L FLS+SSDVLL+ ++I F+ A ++  RN
Sbjct: 72  LPFLSVSSDVLLIVIMISFVHARVSAFRN 100


>ref|NP_974275.1| reticulon-like protein B16 [Arabidopsis thaliana]
           gi|75151434|sp|Q8GYH6.1|RTNLP_ARATH RecName:
           Full=Reticulon-like protein B16; Short=AtRTNLB16
           gi|26450318|dbj|BAC42275.1| unknown protein [Arabidopsis
           thaliana] gi|28827594|gb|AAO50641.1| unknown protein
           [Arabidopsis thaliana] gi|332641451|gb|AEE74972.1|
           reticulon-like protein B16 [Arabidopsis thaliana]
          Length = 226

 Score =  107 bits (268), Expect = 8e-22
 Identities = 47/89 (52%), Positives = 70/89 (78%)
 Frame = +1

Query: 55  DGVNEDCTSAAYRLFDRQRPMHQIMGGGKAADVIMWKRWRVSVGIIVVATIAWLVFEWSE 234
           DG NE  +S+ YRL  RQ  +HQ MGGGKAAD+++W+R  +S+G+I+++T+AWL+FE+S 
Sbjct: 12  DGRNEGGSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSG 71

Query: 235 LSFLSISSDVLLVTVVIQFLRANLATLRN 321
           L FLS+SSDVLL+ ++I F+ A ++  RN
Sbjct: 72  LPFLSVSSDVLLIVIMISFVHARVSAFRN 100