BLASTX nr result

ID: Coptis25_contig00009523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009523
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525569.1| nascent polypeptide associated complex alpha...   174   3e-42
gb|ABK93224.1| unknown [Populus trichocarpa]                          172   7e-42
ref|XP_002266597.1| PREDICTED: nascent polypeptide-associated co...   170   3e-41
ref|XP_002303961.1| predicted protein [Populus trichocarpa] gi|2...   172   4e-41
gb|ABK92784.1| unknown [Populus trichocarpa]                          172   5e-41

>ref|XP_002525569.1| nascent polypeptide associated complex alpha subunit, putative
           [Ricinus communis] gi|223535148|gb|EEF36828.1| nascent
           polypeptide associated complex alpha subunit, putative
           [Ricinus communis]
          Length = 131

 Score =  174 bits (440), Expect(2) = 3e-42
 Identities = 89/91 (97%), Positives = 91/91 (100%)
 Frame = -3

Query: 638 DVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVISKPESSAMAQDDEDVDE 459
           DVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVISKPE+SAMAQDDE+VDE
Sbjct: 30  DVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVISKPETSAMAQDDEEVDE 89

Query: 458 TGVEPKDIELVMTQAGVSRSKAVKALKAADG 366
           TGVEPKDIELVMTQAGVSRSKAVKALKAADG
Sbjct: 90  TGVEPKDIELVMTQAGVSRSKAVKALKAADG 120



 Score = 24.3 bits (51), Expect(2) = 3e-42
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -2

Query: 297 DIVSAIMELTN 265
           DIVSAIMELTN
Sbjct: 121 DIVSAIMELTN 131


>gb|ABK93224.1| unknown [Populus trichocarpa]
          Length = 205

 Score =  172 bits (436), Expect(2) = 7e-42
 Identities = 88/91 (96%), Positives = 91/91 (100%)
 Frame = -3

Query: 638 DVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVISKPESSAMAQDDEDVDE 459
           DVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVISKPE+SA+AQDDE+VDE
Sbjct: 104 DVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVISKPETSAIAQDDEEVDE 163

Query: 458 TGVEPKDIELVMTQAGVSRSKAVKALKAADG 366
           TGVEPKDIELVMTQAGVSRSKAVKALKAADG
Sbjct: 164 TGVEPKDIELVMTQAGVSRSKAVKALKAADG 194



 Score = 24.3 bits (51), Expect(2) = 7e-42
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -2

Query: 297 DIVSAIMELTN 265
           DIVSAIMELTN
Sbjct: 195 DIVSAIMELTN 205


>ref|XP_002266597.1| PREDICTED: nascent polypeptide-associated complex subunit
           alpha-like [Vitis vinifera] gi|298205090|emb|CBI40611.3|
           unnamed protein product [Vitis vinifera]
          Length = 202

 Score =  170 bits (431), Expect(2) = 3e-41
 Identities = 87/91 (95%), Positives = 91/91 (100%)
 Frame = -3

Query: 638 DVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVISKPESSAMAQDDEDVDE 459
           DVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLS+VI+KPE+S+MAQDDEDVDE
Sbjct: 101 DVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSNVIAKPEASSMAQDDEDVDE 160

Query: 458 TGVEPKDIELVMTQAGVSRSKAVKALKAADG 366
           TGVEPKDIELVMTQAGVSRSKAVKALKAADG
Sbjct: 161 TGVEPKDIELVMTQAGVSRSKAVKALKAADG 191



 Score = 24.3 bits (51), Expect(2) = 3e-41
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -2

Query: 297 DIVSAIMELTN 265
           DIVSAIMELTN
Sbjct: 192 DIVSAIMELTN 202


>ref|XP_002303961.1| predicted protein [Populus trichocarpa] gi|222841393|gb|EEE78940.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score =  172 bits (436), Expect(2) = 4e-41
 Identities = 88/91 (96%), Positives = 91/91 (100%)
 Frame = -3

Query: 638 DVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVISKPESSAMAQDDEDVDE 459
           DVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVISKPE+SA+AQDDE+VDE
Sbjct: 26  DVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVISKPETSAIAQDDEEVDE 85

Query: 458 TGVEPKDIELVMTQAGVSRSKAVKALKAADG 366
           TGVEPKDIELVMTQAGVSRSKAVKALKAADG
Sbjct: 86  TGVEPKDIELVMTQAGVSRSKAVKALKAADG 116



 Score = 21.9 bits (45), Expect(2) = 4e-41
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -2

Query: 297 DIVSAIMELT 268
           DIVSAIMELT
Sbjct: 117 DIVSAIMELT 126


>gb|ABK92784.1| unknown [Populus trichocarpa]
          Length = 204

 Score =  172 bits (436), Expect = 5e-41
 Identities = 88/91 (96%), Positives = 91/91 (100%)
 Frame = -3

Query: 638 DVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVISKPESSAMAQDDEDVDE 459
           DVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVISKPE+SA+AQDDE+VDE
Sbjct: 103 DVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVISKPETSAVAQDDEEVDE 162

Query: 458 TGVEPKDIELVMTQAGVSRSKAVKALKAADG 366
           TGVEPKDIELVMTQAGVSRSKAVKALKAADG
Sbjct: 163 TGVEPKDIELVMTQAGVSRSKAVKALKAADG 193


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