BLASTX nr result

ID: Coptis25_contig00009519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009519
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16320.3| unnamed protein product [Vitis vinifera]               63   3e-08
ref|XP_002285194.1| PREDICTED: serine/threonine-protein phosphat...    63   3e-08
ref|XP_003597254.1| Serine/threonine protein phosphatase 6 regul...    61   8e-08
ref|NP_190105.3| SIT4 phosphatase-associated family protein [Ara...    60   2e-07
emb|CAB72157.1| putative protein [Arabidopsis thaliana]                60   2e-07

>emb|CBI16320.3| unnamed protein product [Vitis vinifera]
          Length = 790

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = -2

Query: 469 GDFVMLLNVSSDEKILPAIYGELRPPLGKHRLK 371
           GD +MLLNVSSDEK+LP  YGELRPPLGKHRLK
Sbjct: 305 GDLLMLLNVSSDEKVLPTTYGELRPPLGKHRLK 337


>ref|XP_002285194.1| PREDICTED: serine/threonine-protein phosphatase 6 regulatory
           subunit 3-like [Vitis vinifera]
          Length = 850

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = -2

Query: 469 GDFVMLLNVSSDEKILPAIYGELRPPLGKHRLK 371
           GD +MLLNVSSDEK+LP  YGELRPPLGKHRLK
Sbjct: 305 GDLLMLLNVSSDEKVLPTTYGELRPPLGKHRLK 337


>ref|XP_003597254.1| Serine/threonine protein phosphatase 6 regulatory subunit [Medicago
           truncatula] gi|355486302|gb|AES67505.1| Serine/threonine
           protein phosphatase 6 regulatory subunit [Medicago
           truncatula]
          Length = 874

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = -2

Query: 469 GDFVMLLNVSSDEKILPAIYGELRPPLGKHRLK 371
           G+ +MLLNVSSDEK+LP  YGELRPPLGKHRLK
Sbjct: 329 GELLMLLNVSSDEKVLPTTYGELRPPLGKHRLK 361


>ref|NP_190105.3| SIT4 phosphatase-associated family protein [Arabidopsis thaliana]
           gi|332644481|gb|AEE78002.1| SIT4 phosphatase-associated
           family protein [Arabidopsis thaliana]
          Length = 789

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = -2

Query: 469 GDFVMLLNVSSDEKILPAIYGELRPPLGKHRLK 371
           GDFV LLNV+SDEKILP  YG+LRPPLG HRLK
Sbjct: 306 GDFVALLNVTSDEKILPTTYGQLRPPLGSHRLK 338


>emb|CAB72157.1| putative protein [Arabidopsis thaliana]
          Length = 774

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = -2

Query: 469 GDFVMLLNVSSDEKILPAIYGELRPPLGKHRLK 371
           GDFV LLNV+SDEKILP  YG+LRPPLG HRLK
Sbjct: 250 GDFVALLNVTSDEKILPTTYGQLRPPLGSHRLK 282


Top