BLASTX nr result

ID: Coptis25_contig00009517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009517
         (1761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [V...   562   e-157
ref|XP_002313500.1| predicted protein [Populus trichocarpa] gi|2...   542   e-151
ref|XP_003538087.1| PREDICTED: large subunit GTPase 1 homolog [G...   520   e-145
ref|XP_004139607.1| PREDICTED: large subunit GTPase 1 homolog [C...   519   e-145
ref|NP_172317.1| P-loop containing nucleoside triphosphate hydro...   517   e-144

>ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [Vitis vinifera]
          Length = 597

 Score =  562 bits (1448), Expect = e-157
 Identities = 291/444 (65%), Positives = 330/444 (74%), Gaps = 3/444 (0%)
 Frame = -3

Query: 1759 WRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDEHKETLLLVNKADLLPLALRE 1580
            WRQLWRVLERSDL+VMVVDARDPLFYRCPDLEAYA+EIDEHK+TLLLVNKADLLP ++RE
Sbjct: 157  WRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYAQEIDEHKKTLLLVNKADLLPFSVRE 216

Query: 1579 KWAKYFHDNGILFLFWSAKAAYAALEGKPLKGS-ENQSTLQNSDVTDTNIFGRDXXXXXX 1403
            +WAKYF  +GILF+FWSAKAA AALEGK L    E Q  LQ +D  DT I+GRD      
Sbjct: 217  RWAKYFRLHGILFIFWSAKAASAALEGKKLNVQWETQKPLQETDDADTKIYGRDELLARL 276

Query: 1402 XXXXXXXXATRGNIRXXXXXXXXXXXXXXXXXXXXXXXXXXVGFVGYPNVGKSSTINALV 1223
                      +                              VGFVGYPNVGKSSTINALV
Sbjct: 277  QSEAEEISVRKRKSSSSSTDSSHVQFHGGHVAGNSTSRSVVVGFVGYPNVGKSSTINALV 336

Query: 1222 GEKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQH 1043
            GEKRTGVTSTPGKTKHFQTLIISDEL LCDCPGLVFPSF++SRYEM+ASGVLPIDRMT+H
Sbjct: 337  GEKRTGVTSTPGKTKHFQTLIISDELTLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEH 396

Query: 1042 REAVQVVANRVPRDAIEEVYNITLPKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPD 863
            REAVQVVANRVPR  IE+VY ITLPKPKPYE Q RPPLA+E LRAYC+SRGYVASSGLPD
Sbjct: 397  REAVQVVANRVPRHVIEDVYKITLPKPKPYEQQNRPPLASEFLRAYCASRGYVASSGLPD 456

Query: 862  ETKAARLILKDYLDGKLPHFEFPPGMPNKDDQEVDTLELGTSPAYETDSSDAEN--NSAT 689
            ET+AAR ILKDY+DGK+PHFE PPGM ++  +  D  E   S  +E+D+SD+EN  NS +
Sbjct: 457  ETRAARQILKDYIDGKVPHFEMPPGMTDEVSEFEDPAEPSFSETHESDASDSENPPNSES 516

Query: 688  EGTSTNNLEFVLNDLESFDITNGLXXXXXXXXXXXXXXXXXXASYKQHKKPQRKKNRSWR 509
            E  S  NLE VLNDL++FD+ NGL                  A +KQHKKPQRKK+RSWR
Sbjct: 517  ESESAPNLEHVLNDLDAFDMANGL------ASKKAPVQKTPKAPHKQHKKPQRKKDRSWR 570

Query: 508  VGNEETDGMPILKVFQKPINSGPL 437
            V N+E DGMP+ +VFQKP+N+GPL
Sbjct: 571  VKNDEDDGMPVARVFQKPVNTGPL 594


>ref|XP_002313500.1| predicted protein [Populus trichocarpa] gi|222849908|gb|EEE87455.1|
            predicted protein [Populus trichocarpa]
          Length = 603

 Score =  542 bits (1396), Expect = e-151
 Identities = 279/443 (62%), Positives = 323/443 (72%), Gaps = 1/443 (0%)
 Frame = -3

Query: 1759 WRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDEHKETLLLVNKADLLPLALRE 1580
            WRQLWRVLERSDL+VMVVDARDPLFYRCPDLEAYAREIDEHK TLLLVNKADLLP ++R+
Sbjct: 162  WRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYAREIDEHKRTLLLVNKADLLPFSVRQ 221

Query: 1579 KWAKYFHDNGILFLFWSAKAAYAALEGKPLKGSEN-QSTLQNSDVTDTNIFGRDXXXXXX 1403
            KWA YF   GILFLFWSAKAA A LEGK L+G  N Q+TLQ  D  DT I+GRD      
Sbjct: 222  KWADYFRHLGILFLFWSAKAATAVLEGKILQGPWNEQATLQEMDDPDTKIYGRDELLARL 281

Query: 1402 XXXXXXXXATRGNIRXXXXXXXXXXXXXXXXXXXXXXXXXXVGFVGYPNVGKSSTINALV 1223
                      R                              VGFVGYPNVGKSSTINALV
Sbjct: 282  QSEAETIVRIRSKSVSSGSGPSNFQSSGGKFAGNSAPKHVVVGFVGYPNVGKSSTINALV 341

Query: 1222 GEKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQH 1043
            G+KRTGVTSTPGKTKHFQTLI+S++L LCDCPGLVFPSF++SRYEM+ASGVLPIDRMT+H
Sbjct: 342  GQKRTGVTSTPGKTKHFQTLIMSEKLTLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEH 401

Query: 1042 REAVQVVANRVPRDAIEEVYNITLPKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPD 863
            REAVQVVANRVPR  IE+VY I LPKPKPYE Q+RPPLA+ELLR YC+SRGYV SSGLPD
Sbjct: 402  REAVQVVANRVPRRVIEDVYKINLPKPKPYEPQSRPPLASELLRTYCASRGYVGSSGLPD 461

Query: 862  ETKAARLILKDYLDGKLPHFEFPPGMPNKDDQEVDTLELGTSPAYETDSSDAENNSATEG 683
            ET+AAR ILKDY+DGKL H E PPG+ +++  + D      S  +++DSSD EN +  +G
Sbjct: 462  ETRAARQILKDYIDGKLTHHEIPPGISDEEGSDQDDAGSSLSETHQSDSSDTENPAENDG 521

Query: 682  TSTNNLEFVLNDLESFDITNGLXXXXXXXXXXXXXXXXXXASYKQHKKPQRKKNRSWRVG 503
             +T  LE VL+DL SFD+ NGL                  AS+K HKKPQ+KK+RSWR+ 
Sbjct: 522  KNTPALEHVLDDLNSFDMANGL---AHKKVTVKKPSASASASHKHHKKPQKKKDRSWRIE 578

Query: 502  NEETDGMPILKVFQKPINSGPLK 434
            N+  DGMP+++VFQK +N+GPLK
Sbjct: 579  NDGGDGMPVVRVFQKSVNTGPLK 601


>ref|XP_003538087.1| PREDICTED: large subunit GTPase 1 homolog [Glycine max]
          Length = 594

 Score =  520 bits (1338), Expect = e-145
 Identities = 269/444 (60%), Positives = 316/444 (71%), Gaps = 1/444 (0%)
 Frame = -3

Query: 1759 WRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDEHKETLLLVNKADLLPLALRE 1580
            WRQLWRV+ERSDL+VMVVD+RDPLFYRCPDLEAYARE+DEHK TLLLVNKADLLP+++RE
Sbjct: 156  WRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAREVDEHKRTLLLVNKADLLPVSIRE 215

Query: 1579 KWAKYFHDNGILFLFWSAKAAYAALEGKPLKGSENQSTLQNSDVTDTNIFGRDXXXXXXX 1400
            KWA+YF  + ILF+FWSAKAA AALEGK L  S     +  ++  DT I+GRD       
Sbjct: 216  KWAEYFRAHDILFIFWSAKAATAALEGKKLGSSWEDDNMGRTNSPDTKIYGRDELLARLQ 275

Query: 1399 XXXXXXXATRGNIRXXXXXXXXXXXXXXXXXXXXXXXXXXVGFVGYPNVGKSSTINALVG 1220
                     R N                            VGFVGYPNVGKSSTINALVG
Sbjct: 276  SEAEEIVDRRRNSGSSDAGPSNIKSPAENTAGSSSSSNVIVGFVGYPNVGKSSTINALVG 335

Query: 1219 EKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQHR 1040
            +KRTGVTSTPGKTKHFQTLIISDEL+LCDCPGLVFPSF++SRYEM+A GVLPIDR+++HR
Sbjct: 336  QKRTGVTSTPGKTKHFQTLIISDELILCDCPGLVFPSFSSSRYEMIACGVLPIDRLSEHR 395

Query: 1039 EAVQVVANRVPRDAIEEVYNITLPKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPDE 860
            E+VQVVA+RVPR  IEE+Y I LPKPK YESQ+RPPLA+ELLRAYC+SRGYVASSGLPDE
Sbjct: 396  ESVQVVADRVPRHVIEEIYKIRLPKPKSYESQSRPPLASELLRAYCTSRGYVASSGLPDE 455

Query: 859  TKAARLILKDYLDGKLPHFEFPPGMPNKDDQEVDTLELGTSPAYETDSSDAENNSATEGT 680
            T+AARL+LKDY DGKLPH++ PPG  +++    +           +DSS  E +S  +  
Sbjct: 456  TRAARLMLKDYTDGKLPHYQKPPGASDEEQALEEPAGHDLVDLDASDSSGTEESSDDKSE 515

Query: 679  STNNLEFVLNDLESFDITNGLXXXXXXXXXXXXXXXXXXASYK-QHKKPQRKKNRSWRVG 503
               NLE VL+DL SFD+ NGL                  AS+K  HKKPQR KNRSWR G
Sbjct: 516  LAPNLEHVLDDLNSFDMANGL------APKNITTVKKPKASHKHHHKKPQRTKNRSWRAG 569

Query: 502  NEETDGMPILKVFQKPINSGPLKA 431
            NE+ DGMP+ + FQK  N+GP+KA
Sbjct: 570  NEDADGMPVARFFQKAANTGPMKA 593


>ref|XP_004139607.1| PREDICTED: large subunit GTPase 1 homolog [Cucumis sativus]
          Length = 588

 Score =  519 bits (1337), Expect = e-145
 Identities = 274/445 (61%), Positives = 319/445 (71%), Gaps = 2/445 (0%)
 Frame = -3

Query: 1759 WRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDEHKETLLLVNKADLLPLALRE 1580
            WRQLWRV+ER DL+VMVVDARDPLFYRCPDLEAYARE+D+HK T+LLVNKADLLP ++R+
Sbjct: 157  WRQLWRVVERCDLLVMVVDARDPLFYRCPDLEAYAREVDQHKRTMLLVNKADLLPYSVRK 216

Query: 1579 KWAKYFHDNGILFLFWSAKAAYAALEGKPLKGSENQSTLQNS-DVTDTNIFGRDXXXXXX 1403
            KWA++F+ + IL+LFWSAKAA A LEG+ L    N +  QN  D  DT I+ RD      
Sbjct: 217  KWAEFFNQHEILYLFWSAKAASATLEGRKLGSGWNTNEPQNGVDDPDTKIYARDELLSRL 276

Query: 1402 XXXXXXXXATRGNIRXXXXXXXXXXXXXXXXXXXXXXXXXXVGFVGYPNVGKSSTINALV 1223
                      R + R                           GFVGYPNVGKSSTINALV
Sbjct: 277  QYEAERIVERRASSRSDNLSLEGCMNEKSSGSVMV-------GFVGYPNVGKSSTINALV 329

Query: 1222 GEKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQH 1043
            G+KR GVTSTPGKTKHFQTLIISD+L LCDCPGLVFPSF++SRYEM+A GVLPIDRMT+H
Sbjct: 330  GQKRAGVTSTPGKTKHFQTLIISDKLTLCDCPGLVFPSFSSSRYEMIAYGVLPIDRMTEH 389

Query: 1042 REAVQVVANRVPRDAIEEVYNITLPKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPD 863
            REAVQVVANRVPR  IE+VY ITLPKPKPYE Q+RPPLA+ELL+AYC SRGYVASSGLPD
Sbjct: 390  REAVQVVANRVPRHVIEDVYKITLPKPKPYEPQSRPPLASELLKAYCVSRGYVASSGLPD 449

Query: 862  ETKAARLILKDYLDGKLPHFEFPPGMPNKDD-QEVDTLELGTSPAYETDSSDAENNSATE 686
            ET+A+R ILKDY+DGK+PH E PPGM  +D  QE D      S  +++DS D E +S  +
Sbjct: 450  ETRASRQILKDYVDGKIPHHELPPGMLKEDHIQEEDARSFELSDTHDSDSDDVE-DSNMD 508

Query: 685  GTSTNNLEFVLNDLESFDITNGLXXXXXXXXXXXXXXXXXXASYKQHKKPQRKKNRSWRV 506
            G S    E V++ L+SFDI NGL                  AS+KQHKKPQRKK+RSWRV
Sbjct: 509  GESAPGFEQVVDYLDSFDIANGL-------AKPSITEKKPKASHKQHKKPQRKKDRSWRV 561

Query: 505  GNEETDGMPILKVFQKPINSGPLKA 431
            GN+  DGMP ++V QKPINSG LKA
Sbjct: 562  GNDGGDGMPAVRVLQKPINSGTLKA 586


>ref|NP_172317.1| P-loop containing nucleoside triphosphate hydrolase-like protein
            [Arabidopsis thaliana]
            gi|6664306|gb|AAF22888.1|AC006932_5 T27G7.9 [Arabidopsis
            thaliana] gi|66792666|gb|AAY56435.1| At1g08410
            [Arabidopsis thaliana] gi|133778880|gb|ABO38780.1|
            At1g08410 [Arabidopsis thaliana]
            gi|332190165|gb|AEE28286.1| P-loop containing nucleoside
            triphosphate hydrolase-like protein [Arabidopsis
            thaliana]
          Length = 589

 Score =  517 bits (1331), Expect = e-144
 Identities = 274/443 (61%), Positives = 316/443 (71%), Gaps = 2/443 (0%)
 Frame = -3

Query: 1759 WRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDEHKETLLLVNKADLLPLALRE 1580
            WRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYA+EIDEHK+ +LLVNKADLLP  +RE
Sbjct: 158  WRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAQEIDEHKKIMLLVNKADLLPTDVRE 217

Query: 1579 KWAKYFHDNGILFLFWSAKAAYAALEGKPLKGSENQ-STLQNSDVTDTNIFGRDXXXXXX 1403
            KWA+YF  N ILF+FWSA AA A LEGK LK    Q   LQ +D  D  I+GRD      
Sbjct: 218  KWAEYFRLNNILFVFWSAIAATATLEGKVLKEQWRQPDNLQKTDDPDIMIYGRDELLSRL 277

Query: 1402 XXXXXXXXATRGNIRXXXXXXXXXXXXXXXXXXXXXXXXXXVGFVGYPNVGKSSTINALV 1223
                      R +                            VGFVGYPNVGKSSTINALV
Sbjct: 278  QFEAQEIVKVRNS--------RAASVSSQSWTGEYQRDQAVVGFVGYPNVGKSSTINALV 329

Query: 1222 GEKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQH 1043
            G+KRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSF++SRYEM+ASGVLPIDRMT+H
Sbjct: 330  GQKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEH 389

Query: 1042 REAVQVVANRVPRDAIEEVYNITLPKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPD 863
            REA+QVVA++VPR  IE VYNI+LPKPK YE Q+RPP AAELL++YC+SRGYVASSGLPD
Sbjct: 390  REAIQVVADKVPRRVIESVYNISLPKPKTYERQSRPPHAAELLKSYCASRGYVASSGLPD 449

Query: 862  ETKAARLILKDYLDGKLPHFEFPPGMPNKDDQEVDTLELGTSPAYETDSSDAENNSATEG 683
            ETKAARLILKDY+ GKLPH+  PPGMP  D+ +++  +        ++S D+     TE 
Sbjct: 450  ETKAARLILKDYIGGKLPHYAMPPGMPQADEPDIEDTQELEDILEGSESDDSAVGDETEN 509

Query: 682  TSTNNLEFVLNDLESFDITNGLXXXXXXXXXXXXXXXXXXASYKQHKKPQRKKNRSWRVG 503
                 ++ VL+DL SFD+ NGL                  AS+KQHKKPQRKK+R+WRV 
Sbjct: 510  EQVPGIDDVLDDLSSFDLANGL------KSSKKVTAKKQTASHKQHKKPQRKKDRTWRVQ 563

Query: 502  N-EETDGMPILKVFQKPINSGPL 437
            N E+ DGMP +KVFQKP N+GPL
Sbjct: 564  NTEDGDGMPSVKVFQKPANTGPL 586


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