BLASTX nr result
ID: Coptis25_contig00009517
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00009517 (1761 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [V... 562 e-157 ref|XP_002313500.1| predicted protein [Populus trichocarpa] gi|2... 542 e-151 ref|XP_003538087.1| PREDICTED: large subunit GTPase 1 homolog [G... 520 e-145 ref|XP_004139607.1| PREDICTED: large subunit GTPase 1 homolog [C... 519 e-145 ref|NP_172317.1| P-loop containing nucleoside triphosphate hydro... 517 e-144 >ref|XP_002264570.1| PREDICTED: large subunit GTPase 1 homolog [Vitis vinifera] Length = 597 Score = 562 bits (1448), Expect = e-157 Identities = 291/444 (65%), Positives = 330/444 (74%), Gaps = 3/444 (0%) Frame = -3 Query: 1759 WRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDEHKETLLLVNKADLLPLALRE 1580 WRQLWRVLERSDL+VMVVDARDPLFYRCPDLEAYA+EIDEHK+TLLLVNKADLLP ++RE Sbjct: 157 WRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYAQEIDEHKKTLLLVNKADLLPFSVRE 216 Query: 1579 KWAKYFHDNGILFLFWSAKAAYAALEGKPLKGS-ENQSTLQNSDVTDTNIFGRDXXXXXX 1403 +WAKYF +GILF+FWSAKAA AALEGK L E Q LQ +D DT I+GRD Sbjct: 217 RWAKYFRLHGILFIFWSAKAASAALEGKKLNVQWETQKPLQETDDADTKIYGRDELLARL 276 Query: 1402 XXXXXXXXATRGNIRXXXXXXXXXXXXXXXXXXXXXXXXXXVGFVGYPNVGKSSTINALV 1223 + VGFVGYPNVGKSSTINALV Sbjct: 277 QSEAEEISVRKRKSSSSSTDSSHVQFHGGHVAGNSTSRSVVVGFVGYPNVGKSSTINALV 336 Query: 1222 GEKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQH 1043 GEKRTGVTSTPGKTKHFQTLIISDEL LCDCPGLVFPSF++SRYEM+ASGVLPIDRMT+H Sbjct: 337 GEKRTGVTSTPGKTKHFQTLIISDELTLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEH 396 Query: 1042 REAVQVVANRVPRDAIEEVYNITLPKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPD 863 REAVQVVANRVPR IE+VY ITLPKPKPYE Q RPPLA+E LRAYC+SRGYVASSGLPD Sbjct: 397 REAVQVVANRVPRHVIEDVYKITLPKPKPYEQQNRPPLASEFLRAYCASRGYVASSGLPD 456 Query: 862 ETKAARLILKDYLDGKLPHFEFPPGMPNKDDQEVDTLELGTSPAYETDSSDAEN--NSAT 689 ET+AAR ILKDY+DGK+PHFE PPGM ++ + D E S +E+D+SD+EN NS + Sbjct: 457 ETRAARQILKDYIDGKVPHFEMPPGMTDEVSEFEDPAEPSFSETHESDASDSENPPNSES 516 Query: 688 EGTSTNNLEFVLNDLESFDITNGLXXXXXXXXXXXXXXXXXXASYKQHKKPQRKKNRSWR 509 E S NLE VLNDL++FD+ NGL A +KQHKKPQRKK+RSWR Sbjct: 517 ESESAPNLEHVLNDLDAFDMANGL------ASKKAPVQKTPKAPHKQHKKPQRKKDRSWR 570 Query: 508 VGNEETDGMPILKVFQKPINSGPL 437 V N+E DGMP+ +VFQKP+N+GPL Sbjct: 571 VKNDEDDGMPVARVFQKPVNTGPL 594 >ref|XP_002313500.1| predicted protein [Populus trichocarpa] gi|222849908|gb|EEE87455.1| predicted protein [Populus trichocarpa] Length = 603 Score = 542 bits (1396), Expect = e-151 Identities = 279/443 (62%), Positives = 323/443 (72%), Gaps = 1/443 (0%) Frame = -3 Query: 1759 WRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDEHKETLLLVNKADLLPLALRE 1580 WRQLWRVLERSDL+VMVVDARDPLFYRCPDLEAYAREIDEHK TLLLVNKADLLP ++R+ Sbjct: 162 WRQLWRVLERSDLLVMVVDARDPLFYRCPDLEAYAREIDEHKRTLLLVNKADLLPFSVRQ 221 Query: 1579 KWAKYFHDNGILFLFWSAKAAYAALEGKPLKGSEN-QSTLQNSDVTDTNIFGRDXXXXXX 1403 KWA YF GILFLFWSAKAA A LEGK L+G N Q+TLQ D DT I+GRD Sbjct: 222 KWADYFRHLGILFLFWSAKAATAVLEGKILQGPWNEQATLQEMDDPDTKIYGRDELLARL 281 Query: 1402 XXXXXXXXATRGNIRXXXXXXXXXXXXXXXXXXXXXXXXXXVGFVGYPNVGKSSTINALV 1223 R VGFVGYPNVGKSSTINALV Sbjct: 282 QSEAETIVRIRSKSVSSGSGPSNFQSSGGKFAGNSAPKHVVVGFVGYPNVGKSSTINALV 341 Query: 1222 GEKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQH 1043 G+KRTGVTSTPGKTKHFQTLI+S++L LCDCPGLVFPSF++SRYEM+ASGVLPIDRMT+H Sbjct: 342 GQKRTGVTSTPGKTKHFQTLIMSEKLTLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEH 401 Query: 1042 REAVQVVANRVPRDAIEEVYNITLPKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPD 863 REAVQVVANRVPR IE+VY I LPKPKPYE Q+RPPLA+ELLR YC+SRGYV SSGLPD Sbjct: 402 REAVQVVANRVPRRVIEDVYKINLPKPKPYEPQSRPPLASELLRTYCASRGYVGSSGLPD 461 Query: 862 ETKAARLILKDYLDGKLPHFEFPPGMPNKDDQEVDTLELGTSPAYETDSSDAENNSATEG 683 ET+AAR ILKDY+DGKL H E PPG+ +++ + D S +++DSSD EN + +G Sbjct: 462 ETRAARQILKDYIDGKLTHHEIPPGISDEEGSDQDDAGSSLSETHQSDSSDTENPAENDG 521 Query: 682 TSTNNLEFVLNDLESFDITNGLXXXXXXXXXXXXXXXXXXASYKQHKKPQRKKNRSWRVG 503 +T LE VL+DL SFD+ NGL AS+K HKKPQ+KK+RSWR+ Sbjct: 522 KNTPALEHVLDDLNSFDMANGL---AHKKVTVKKPSASASASHKHHKKPQKKKDRSWRIE 578 Query: 502 NEETDGMPILKVFQKPINSGPLK 434 N+ DGMP+++VFQK +N+GPLK Sbjct: 579 NDGGDGMPVVRVFQKSVNTGPLK 601 >ref|XP_003538087.1| PREDICTED: large subunit GTPase 1 homolog [Glycine max] Length = 594 Score = 520 bits (1338), Expect = e-145 Identities = 269/444 (60%), Positives = 316/444 (71%), Gaps = 1/444 (0%) Frame = -3 Query: 1759 WRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDEHKETLLLVNKADLLPLALRE 1580 WRQLWRV+ERSDL+VMVVD+RDPLFYRCPDLEAYARE+DEHK TLLLVNKADLLP+++RE Sbjct: 156 WRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAREVDEHKRTLLLVNKADLLPVSIRE 215 Query: 1579 KWAKYFHDNGILFLFWSAKAAYAALEGKPLKGSENQSTLQNSDVTDTNIFGRDXXXXXXX 1400 KWA+YF + ILF+FWSAKAA AALEGK L S + ++ DT I+GRD Sbjct: 216 KWAEYFRAHDILFIFWSAKAATAALEGKKLGSSWEDDNMGRTNSPDTKIYGRDELLARLQ 275 Query: 1399 XXXXXXXATRGNIRXXXXXXXXXXXXXXXXXXXXXXXXXXVGFVGYPNVGKSSTINALVG 1220 R N VGFVGYPNVGKSSTINALVG Sbjct: 276 SEAEEIVDRRRNSGSSDAGPSNIKSPAENTAGSSSSSNVIVGFVGYPNVGKSSTINALVG 335 Query: 1219 EKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQHR 1040 +KRTGVTSTPGKTKHFQTLIISDEL+LCDCPGLVFPSF++SRYEM+A GVLPIDR+++HR Sbjct: 336 QKRTGVTSTPGKTKHFQTLIISDELILCDCPGLVFPSFSSSRYEMIACGVLPIDRLSEHR 395 Query: 1039 EAVQVVANRVPRDAIEEVYNITLPKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPDE 860 E+VQVVA+RVPR IEE+Y I LPKPK YESQ+RPPLA+ELLRAYC+SRGYVASSGLPDE Sbjct: 396 ESVQVVADRVPRHVIEEIYKIRLPKPKSYESQSRPPLASELLRAYCTSRGYVASSGLPDE 455 Query: 859 TKAARLILKDYLDGKLPHFEFPPGMPNKDDQEVDTLELGTSPAYETDSSDAENNSATEGT 680 T+AARL+LKDY DGKLPH++ PPG +++ + +DSS E +S + Sbjct: 456 TRAARLMLKDYTDGKLPHYQKPPGASDEEQALEEPAGHDLVDLDASDSSGTEESSDDKSE 515 Query: 679 STNNLEFVLNDLESFDITNGLXXXXXXXXXXXXXXXXXXASYK-QHKKPQRKKNRSWRVG 503 NLE VL+DL SFD+ NGL AS+K HKKPQR KNRSWR G Sbjct: 516 LAPNLEHVLDDLNSFDMANGL------APKNITTVKKPKASHKHHHKKPQRTKNRSWRAG 569 Query: 502 NEETDGMPILKVFQKPINSGPLKA 431 NE+ DGMP+ + FQK N+GP+KA Sbjct: 570 NEDADGMPVARFFQKAANTGPMKA 593 >ref|XP_004139607.1| PREDICTED: large subunit GTPase 1 homolog [Cucumis sativus] Length = 588 Score = 519 bits (1337), Expect = e-145 Identities = 274/445 (61%), Positives = 319/445 (71%), Gaps = 2/445 (0%) Frame = -3 Query: 1759 WRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDEHKETLLLVNKADLLPLALRE 1580 WRQLWRV+ER DL+VMVVDARDPLFYRCPDLEAYARE+D+HK T+LLVNKADLLP ++R+ Sbjct: 157 WRQLWRVVERCDLLVMVVDARDPLFYRCPDLEAYAREVDQHKRTMLLVNKADLLPYSVRK 216 Query: 1579 KWAKYFHDNGILFLFWSAKAAYAALEGKPLKGSENQSTLQNS-DVTDTNIFGRDXXXXXX 1403 KWA++F+ + IL+LFWSAKAA A LEG+ L N + QN D DT I+ RD Sbjct: 217 KWAEFFNQHEILYLFWSAKAASATLEGRKLGSGWNTNEPQNGVDDPDTKIYARDELLSRL 276 Query: 1402 XXXXXXXXATRGNIRXXXXXXXXXXXXXXXXXXXXXXXXXXVGFVGYPNVGKSSTINALV 1223 R + R GFVGYPNVGKSSTINALV Sbjct: 277 QYEAERIVERRASSRSDNLSLEGCMNEKSSGSVMV-------GFVGYPNVGKSSTINALV 329 Query: 1222 GEKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQH 1043 G+KR GVTSTPGKTKHFQTLIISD+L LCDCPGLVFPSF++SRYEM+A GVLPIDRMT+H Sbjct: 330 GQKRAGVTSTPGKTKHFQTLIISDKLTLCDCPGLVFPSFSSSRYEMIAYGVLPIDRMTEH 389 Query: 1042 REAVQVVANRVPRDAIEEVYNITLPKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPD 863 REAVQVVANRVPR IE+VY ITLPKPKPYE Q+RPPLA+ELL+AYC SRGYVASSGLPD Sbjct: 390 REAVQVVANRVPRHVIEDVYKITLPKPKPYEPQSRPPLASELLKAYCVSRGYVASSGLPD 449 Query: 862 ETKAARLILKDYLDGKLPHFEFPPGMPNKDD-QEVDTLELGTSPAYETDSSDAENNSATE 686 ET+A+R ILKDY+DGK+PH E PPGM +D QE D S +++DS D E +S + Sbjct: 450 ETRASRQILKDYVDGKIPHHELPPGMLKEDHIQEEDARSFELSDTHDSDSDDVE-DSNMD 508 Query: 685 GTSTNNLEFVLNDLESFDITNGLXXXXXXXXXXXXXXXXXXASYKQHKKPQRKKNRSWRV 506 G S E V++ L+SFDI NGL AS+KQHKKPQRKK+RSWRV Sbjct: 509 GESAPGFEQVVDYLDSFDIANGL-------AKPSITEKKPKASHKQHKKPQRKKDRSWRV 561 Query: 505 GNEETDGMPILKVFQKPINSGPLKA 431 GN+ DGMP ++V QKPINSG LKA Sbjct: 562 GNDGGDGMPAVRVLQKPINSGTLKA 586 >ref|NP_172317.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] gi|6664306|gb|AAF22888.1|AC006932_5 T27G7.9 [Arabidopsis thaliana] gi|66792666|gb|AAY56435.1| At1g08410 [Arabidopsis thaliana] gi|133778880|gb|ABO38780.1| At1g08410 [Arabidopsis thaliana] gi|332190165|gb|AEE28286.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] Length = 589 Score = 517 bits (1331), Expect = e-144 Identities = 274/443 (61%), Positives = 316/443 (71%), Gaps = 2/443 (0%) Frame = -3 Query: 1759 WRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAREIDEHKETLLLVNKADLLPLALRE 1580 WRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYA+EIDEHK+ +LLVNKADLLP +RE Sbjct: 158 WRQLWRVLERSDLIVMVVDARDPLFYRCPDLEAYAQEIDEHKKIMLLVNKADLLPTDVRE 217 Query: 1579 KWAKYFHDNGILFLFWSAKAAYAALEGKPLKGSENQ-STLQNSDVTDTNIFGRDXXXXXX 1403 KWA+YF N ILF+FWSA AA A LEGK LK Q LQ +D D I+GRD Sbjct: 218 KWAEYFRLNNILFVFWSAIAATATLEGKVLKEQWRQPDNLQKTDDPDIMIYGRDELLSRL 277 Query: 1402 XXXXXXXXATRGNIRXXXXXXXXXXXXXXXXXXXXXXXXXXVGFVGYPNVGKSSTINALV 1223 R + VGFVGYPNVGKSSTINALV Sbjct: 278 QFEAQEIVKVRNS--------RAASVSSQSWTGEYQRDQAVVGFVGYPNVGKSSTINALV 329 Query: 1222 GEKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSFTTSRYEMVASGVLPIDRMTQH 1043 G+KRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSF++SRYEM+ASGVLPIDRMT+H Sbjct: 330 GQKRTGVTSTPGKTKHFQTLIISDELMLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEH 389 Query: 1042 REAVQVVANRVPRDAIEEVYNITLPKPKPYESQTRPPLAAELLRAYCSSRGYVASSGLPD 863 REA+QVVA++VPR IE VYNI+LPKPK YE Q+RPP AAELL++YC+SRGYVASSGLPD Sbjct: 390 REAIQVVADKVPRRVIESVYNISLPKPKTYERQSRPPHAAELLKSYCASRGYVASSGLPD 449 Query: 862 ETKAARLILKDYLDGKLPHFEFPPGMPNKDDQEVDTLELGTSPAYETDSSDAENNSATEG 683 ETKAARLILKDY+ GKLPH+ PPGMP D+ +++ + ++S D+ TE Sbjct: 450 ETKAARLILKDYIGGKLPHYAMPPGMPQADEPDIEDTQELEDILEGSESDDSAVGDETEN 509 Query: 682 TSTNNLEFVLNDLESFDITNGLXXXXXXXXXXXXXXXXXXASYKQHKKPQRKKNRSWRVG 503 ++ VL+DL SFD+ NGL AS+KQHKKPQRKK+R+WRV Sbjct: 510 EQVPGIDDVLDDLSSFDLANGL------KSSKKVTAKKQTASHKQHKKPQRKKDRTWRVQ 563 Query: 502 N-EETDGMPILKVFQKPINSGPL 437 N E+ DGMP +KVFQKP N+GPL Sbjct: 564 NTEDGDGMPSVKVFQKPANTGPL 586