BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009509
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    79   4e-13
gb|AAO00713.1| retrotransposon protein, putative, unclassified [...    73   2e-11
gb|AAP54692.2| retrotransposon protein, putative, unclassified [...    73   2e-11
gb|EEC72937.1| hypothetical protein OsI_06799 [Oryza sativa Indi...    69   3e-10
gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Ja...    69   4e-10

>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1936

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/112 (35%), Positives = 61/112 (54%)
 Frame = -1

Query: 339 GTTTAVQQLKDLIGRCNVDIVCLAETKASKEKIGYLSK*LKLNGQFAVPAQGQSGGLAVL 160
           G T  VQ L+ LI +    +V L ET+ S EK+  L + L   G   V ++G+SGGLA+ 
Sbjct: 647 GNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGFVGVSSEGKSGGLALY 706

Query: 159 WKEGVELEILGASKN*VTGKLTNYFSTDDWFFSFVYGEPAAHNRNKVWNELR 4
           W E V +++   +K  +   +        W  +FVYGEP   NR+++W+ LR
Sbjct: 707 WDESVSVDVKDINKRYIDAYVRLSPDEPQWHITFVYGEPRVENRHRMWSLLR 758


>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1557

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/111 (36%), Positives = 58/111 (52%)
 Frame = -1

Query: 339 GTTTAVQQLKDLIGRCNVDIVCLAETKASKEKIGYLSK*LKLNGQFAVPAQGQSGGLAVL 160
           G  T VQ+L  L+   +   V L ET+   +KI  L   L L G   V + G SGGLA+ 
Sbjct: 445 GNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAGVSSDGMSGGLALF 504

Query: 159 WKEGVELEILGASKN*VTGKLTNYFSTDDWFFSFVYGEPAAHNRNKVWNEL 7
           W E V +EIL  ++  +   +    +   W  +FVYGEP   NR+K+W+ L
Sbjct: 505 WHESVHVEILNKNERFIDAYIRLSPNDPLWHATFVYGEPRVENRHKMWSLL 555


>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1585

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/111 (36%), Positives = 58/111 (52%)
 Frame = -1

Query: 339 GTTTAVQQLKDLIGRCNVDIVCLAETKASKEKIGYLSK*LKLNGQFAVPAQGQSGGLAVL 160
           G  T VQ+L  L+   +   V L ET+   +KI  L   L L G   V + G SGGLA+ 
Sbjct: 473 GNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAGVSSDGMSGGLALF 532

Query: 159 WKEGVELEILGASKN*VTGKLTNYFSTDDWFFSFVYGEPAAHNRNKVWNEL 7
           W E V +EIL  ++  +   +    +   W  +FVYGEP   NR+K+W+ L
Sbjct: 533 WHESVHVEILNKNERFIDAYIRLSPNDPLWHATFVYGEPRVENRHKMWSLL 583


>gb|EEC72937.1| hypothetical protein OsI_06799 [Oryza sativa Indica Group]
          Length = 1035

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/108 (34%), Positives = 55/108 (50%)
 Frame = -1

Query: 339 GTTTAVQQLKDLIGRCNVDIVCLAETKASKEKIGYLSK*LKLNGQFAVPAQGQSGGLAVL 160
           G    V+ L  L+      IV L+ET+   EK+  L   L L G   V + G SGGLA+ 
Sbjct: 567 GNAATVRDLCALVKEAGSHIVFLSETRQKIEKVRRLRNRLGLKGFAGVNSDGMSGGLALF 626

Query: 159 WKEGVELEILGASKN*VTGKLTNYFSTDDWFFSFVYGEPAAHNRNKVW 16
           W E V +EI+  ++  +   +    +   W  +FVYGEP   NR+++W
Sbjct: 627 WHESVHVEIISMNERYIDAYVRLSVNAPVWHATFVYGEPRVENRHRMW 674


>gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1888

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/108 (33%), Positives = 55/108 (50%)
 Frame = -1

Query: 339 GTTTAVQQLKDLIGRCNVDIVCLAETKASKEKIGYLSK*LKLNGQFAVPAQGQSGGLAVL 160
           G    V+ L  L+      IV L+ET+   EK+  L   L L G   V + G SGGLA+ 
Sbjct: 667 GNAVTVRDLCALVKEAGSHIVFLSETRQKIEKVRRLRNRLGLRGFAGVNSDGMSGGLALF 726

Query: 159 WKEGVELEILGASKN*VTGKLTNYFSTDDWFFSFVYGEPAAHNRNKVW 16
           W E + +EI+  ++  +   +    +   W  +FVYGEP   NR+++W
Sbjct: 727 WHESIHVEIISMNERYIDAYVRLSVNAPVWHATFVYGEPRVENRHRMW 774