BLASTX nr result

ID: Coptis25_contig00009506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009506
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267975.1| PREDICTED: cell number regulator 6 isoform 1...   397   e-108
ref|XP_002510957.1| conserved hypothetical protein [Ricinus comm...   386   e-105
emb|CBI16603.3| unnamed protein product [Vitis vinifera]              383   e-104
ref|XP_002277735.1| PREDICTED: cell number regulator 6 [Vitis vi...   381   e-103
ref|XP_002304409.1| predicted protein [Populus trichocarpa] gi|2...   379   e-103

>ref|XP_002267975.1| PREDICTED: cell number regulator 6 isoform 1 [Vitis vinifera]
            gi|296084213|emb|CBI24601.3| unnamed protein product
            [Vitis vinifera]
          Length = 239

 Score =  397 bits (1020), Expect = e-108
 Identities = 176/237 (74%), Positives = 203/237 (85%), Gaps = 2/237 (0%)
 Frame = -1

Query: 1002 MSDGNVQSRYVKLTKDQDAGSIEEIRPGELNQPVQVPQLDVRRCNECGQTLPDSYEPPKD 823
            M++G V SRYVKLTKDQ  G +EEI+PGELNQP+ VPQL+VR+CNECGQ LP+SYEPP +
Sbjct: 1    MAEGAVHSRYVKLTKDQ--GPVEEIKPGELNQPIDVPQLNVRKCNECGQPLPESYEPPAN 58

Query: 822  EPWTSGIFGCAEDTDSCWTGLFCPCVLFGRNVENLREDIPWTNTCICHAICVEGGIXXXX 643
            EPWT+GIFGCAEDT+SCWTGLFCPCVLFGRN+E+LRED PWT  CICHAIC+EGGI    
Sbjct: 59   EPWTTGIFGCAEDTESCWTGLFCPCVLFGRNIESLREDTPWTTPCICHAICIEGGIALAI 118

Query: 642  XXAIFHGIDPKTSFLIGESLLFAWWMCGIYTGLFRQSLQKKYHLKDSPCDPCAVHCCLHW 463
               +FHGIDP+TSFLI E LLFAWWMCGIYTGL RQSLQKKYHL++SPCDPC VHCC+HW
Sbjct: 119  GTGVFHGIDPRTSFLICEGLLFAWWMCGIYTGLVRQSLQKKYHLQNSPCDPCMVHCCMHW 178

Query: 462  CALCQEHREMKSRLSDNAVMPMTVINPPPVQEMTSAEN--QESPRASTNGTELANLE 298
            CALCQEHREMK RLS++ VMPMT++NPPPVQEM S EN  Q++  +S  GTE  +LE
Sbjct: 179  CALCQEHREMKGRLSEDLVMPMTIVNPPPVQEMNSEENNQQDAAPSSAKGTEHTHLE 235


>ref|XP_002510957.1| conserved hypothetical protein [Ricinus communis]
            gi|223550072|gb|EEF51559.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 236

 Score =  386 bits (992), Expect = e-105
 Identities = 168/232 (72%), Positives = 201/232 (86%), Gaps = 1/232 (0%)
 Frame = -1

Query: 1002 MSDGNVQSRYVKLTKDQDAGSIEEIRPGELNQPVQVPQLDVRRCNECGQTLPDSYEPPKD 823
            M++ +  SRYVKLTK+Q A  IE+I+PGELNQP++VPQL+VR+CNECGQ LP+++EPP D
Sbjct: 2    MAEASAHSRYVKLTKEQAA--IEDIKPGELNQPIEVPQLNVRKCNECGQPLPENFEPPAD 59

Query: 822  EPWTSGIFGCAEDTDSCWTGLFCPCVLFGRNVENLREDIPWTNTCICHAICVEGGIXXXX 643
            EPWT+GIFGC EDT+SCWTGLFCPCVLFGRNVE+LR+D PWT  CICHA+C+EGG+    
Sbjct: 60   EPWTTGIFGCTEDTESCWTGLFCPCVLFGRNVESLRDDTPWTTPCICHAVCIEGGMALAA 119

Query: 642  XXAIFHGIDPKTSFLIGESLLFAWWMCGIYTGLFRQSLQKKYHLKDSPCDPCAVHCCLHW 463
              AIFHG+DP+TSFL+ E LLFAWWMCGIYTGL RQSLQ+KYHL++SPCDPC VHCC+HW
Sbjct: 120  ATAIFHGVDPRTSFLVCEGLLFAWWMCGIYTGLVRQSLQRKYHLRNSPCDPCMVHCCMHW 179

Query: 462  CALCQEHREMKSRLSDNAVMPMTVINPPPVQEMTSA-ENQESPRASTNGTEL 310
            CALCQEHREMK RLSDN VMPMT++NPPPVQEM SA +N++S  +S  GT L
Sbjct: 180  CALCQEHREMKGRLSDNFVMPMTIVNPPPVQEMNSASDNRDSEPSSEKGTNL 231


>emb|CBI16603.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  383 bits (983), Expect = e-104
 Identities = 171/237 (72%), Positives = 195/237 (82%), Gaps = 1/237 (0%)
 Frame = -1

Query: 1005 KMSDGNVQS-RYVKLTKDQDAGSIEEIRPGELNQPVQVPQLDVRRCNECGQTLPDSYEPP 829
            KMS+G  QS RYVKL KDQ    +E+I PGELNQP++VPQL V RCNECGQ LP+SY+PP
Sbjct: 39   KMSEGIAQSSRYVKLKKDQ--APVEDITPGELNQPIEVPQLIVHRCNECGQPLPESYQPP 96

Query: 828  KDEPWTSGIFGCAEDTDSCWTGLFCPCVLFGRNVENLREDIPWTNTCICHAICVEGGIXX 649
             DE WT+GI GCAED +SCWTGLFCPCVLFG NVE LREDIPWTN C+CHA+CVEGG+  
Sbjct: 97   ADEDWTTGICGCAEDRESCWTGLFCPCVLFGHNVEQLREDIPWTNACVCHALCVEGGMTL 156

Query: 648  XXXXAIFHGIDPKTSFLIGESLLFAWWMCGIYTGLFRQSLQKKYHLKDSPCDPCAVHCCL 469
                A+FHGIDPKTSFLI E LLF WWMCGIYTGLFRQSLQK+YHLK+SPCDPC VHCC+
Sbjct: 157  AAATALFHGIDPKTSFLICEGLLFTWWMCGIYTGLFRQSLQKQYHLKNSPCDPCLVHCCM 216

Query: 468  HWCALCQEHREMKSRLSDNAVMPMTVINPPPVQEMTSAENQESPRASTNGTELANLE 298
            HWCA+CQEHREMK  LS N+ MPMT++NPPPVQEM +  NQE+  +S NGTE   +E
Sbjct: 217  HWCAICQEHREMKGHLSSNSAMPMTIVNPPPVQEMDAGGNQEAAPSSKNGTEHTTME 273


>ref|XP_002277735.1| PREDICTED: cell number regulator 6 [Vitis vinifera]
          Length = 238

 Score =  381 bits (978), Expect = e-103
 Identities = 170/236 (72%), Positives = 194/236 (82%), Gaps = 1/236 (0%)
 Frame = -1

Query: 1002 MSDGNVQS-RYVKLTKDQDAGSIEEIRPGELNQPVQVPQLDVRRCNECGQTLPDSYEPPK 826
            MS+G  QS RYVKL KDQ    +E+I PGELNQP++VPQL V RCNECGQ LP+SY+PP 
Sbjct: 1    MSEGIAQSSRYVKLKKDQ--APVEDITPGELNQPIEVPQLIVHRCNECGQPLPESYQPPA 58

Query: 825  DEPWTSGIFGCAEDTDSCWTGLFCPCVLFGRNVENLREDIPWTNTCICHAICVEGGIXXX 646
            DE WT+GI GCAED +SCWTGLFCPCVLFG NVE LREDIPWTN C+CHA+CVEGG+   
Sbjct: 59   DEDWTTGICGCAEDRESCWTGLFCPCVLFGHNVEQLREDIPWTNACVCHALCVEGGMTLA 118

Query: 645  XXXAIFHGIDPKTSFLIGESLLFAWWMCGIYTGLFRQSLQKKYHLKDSPCDPCAVHCCLH 466
               A+FHGIDPKTSFLI E LLF WWMCGIYTGLFRQSLQK+YHLK+SPCDPC VHCC+H
Sbjct: 119  AATALFHGIDPKTSFLICEGLLFTWWMCGIYTGLFRQSLQKQYHLKNSPCDPCLVHCCMH 178

Query: 465  WCALCQEHREMKSRLSDNAVMPMTVINPPPVQEMTSAENQESPRASTNGTELANLE 298
            WCA+CQEHREMK  LS N+ MPMT++NPPPVQEM +  NQE+  +S NGTE   +E
Sbjct: 179  WCAICQEHREMKGHLSSNSAMPMTIVNPPPVQEMDAGGNQEAAPSSKNGTEHTTME 234


>ref|XP_002304409.1| predicted protein [Populus trichocarpa] gi|222841841|gb|EEE79388.1|
            predicted protein [Populus trichocarpa]
          Length = 234

 Score =  379 bits (974), Expect = e-103
 Identities = 168/232 (72%), Positives = 198/232 (85%), Gaps = 1/232 (0%)
 Frame = -1

Query: 1002 MSDGNVQSRYVKLTKDQDAGSIEEIRPGELNQPVQVPQLDVRRCNECGQTLPDSYEPPKD 823
            M++GNV SRYVKLTK+Q    +EEI+PGELNQP++VP L+V +CNECGQ LP++++PP D
Sbjct: 1    MAEGNV-SRYVKLTKEQTG--VEEIKPGELNQPIEVPHLEVCKCNECGQPLPENFQPPAD 57

Query: 822  EPWTSGIFGCAEDTDSCWTGLFCPCVLFGRNVENLREDIPWTNTCICHAICVEGGIXXXX 643
            EPWT+GIFGCAEDT+SCWTGLFCPCVLFGRN+E+LR+D PWT  C+CHA+CVEGGI    
Sbjct: 58   EPWTTGIFGCAEDTESCWTGLFCPCVLFGRNIESLRDDTPWTTPCVCHAVCVEGGIALAA 117

Query: 642  XXAIFHGIDPKTSFLIGESLLFAWWMCGIYTGLFRQSLQKKYHLKDSPCDPCAVHCCLHW 463
              A+FHGI+P T FLI E LLFAWWMCGIYTGL RQSLQKKYHLK+SPCDPC VHCC+HW
Sbjct: 118  ATAVFHGINPDTPFLICEGLLFAWWMCGIYTGLVRQSLQKKYHLKNSPCDPCMVHCCMHW 177

Query: 462  CALCQEHREMKSRLSDNAVMPMTVINPPPVQEMT-SAENQESPRASTNGTEL 310
            CALCQEHREMK RLSDN VMPMT++NPPPVQEM+ + ENQ+S  +S   T L
Sbjct: 178  CALCQEHREMKGRLSDNFVMPMTIVNPPPVQEMSATTENQDSTPSSEKSTSL 229


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