BLASTX nr result

ID: Coptis25_contig00009504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009504
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281856.1| PREDICTED: protein SEC13 homolog [Vitis vini...   256   2e-66
ref|XP_003551869.1| PREDICTED: protein SEC13 homolog [Glycine max]    253   2e-65
dbj|BAJ10727.1| SEC13 family protein [Lotus japonicus] gi|388515...   252   3e-65
emb|CAN79974.1| hypothetical protein VITISV_009154 [Vitis vinifera]   252   5e-65
emb|CAN63472.1| hypothetical protein VITISV_000787 [Vitis vinifera]   251   8e-65

>ref|XP_002281856.1| PREDICTED: protein SEC13 homolog [Vitis vinifera]
           gi|147809687|emb|CAN73348.1| hypothetical protein
           VITISV_040760 [Vitis vinifera]
          Length = 301

 Score =  256 bits (655), Expect = 2e-66
 Identities = 130/206 (63%), Positives = 143/206 (69%)
 Frame = -3

Query: 619 MPGQKIETGHTDTVHDVVMDYYGKRIATASSDTTIKIVGVSSTASQHHATXXXXXXXXXX 440
           MP QKIETGH DTVHDV MDYYGKR+ATASSDTTIKI+GVS+ ASQH AT          
Sbjct: 1   MPSQKIETGHQDTVHDVAMDYYGKRVATASSDTTIKIIGVSNNASQHLATLIGHQGPVWQ 60

Query: 439 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVIIWNEGNRNEWSQAHVFSEH 260
                                                GRVIIW EGN+NEW+QAHVFS+H
Sbjct: 61  VVWAHPKFGSILASCSYD-------------------GRVIIWKEGNQNEWTQAHVFSDH 101

Query: 259 KVSVNSICWAPHELGLVLACGSSDGNISVFTAGADGGWDTTRIGQAHPAGVTSVSWAPAL 80
           K SVNSI WAPHELGL LACGSSDGNISVFTA +DG WDTT+I QAHP GVTSVSWAP++
Sbjct: 102 KSSVNSIAWAPHELGLCLACGSSDGNISVFTARSDGTWDTTKIDQAHPVGVTSVSWAPSM 161

Query: 79  APGAFIGNGSLEPVTKLVSGGCDNTV 2
           APGA +G+G L+PV KLVSGGCDNTV
Sbjct: 162 APGALVGSGLLDPVQKLVSGGCDNTV 187


>ref|XP_003551869.1| PREDICTED: protein SEC13 homolog [Glycine max]
          Length = 301

 Score =  253 bits (646), Expect = 2e-65
 Identities = 127/206 (61%), Positives = 140/206 (67%)
 Frame = -3

Query: 619 MPGQKIETGHTDTVHDVVMDYYGKRIATASSDTTIKIVGVSSTASQHHATXXXXXXXXXX 440
           MP QK+ETGH DTVHDV MDYYGKR+ATASSD TIKI+GVS+TASQH AT          
Sbjct: 1   MPSQKVETGHQDTVHDVAMDYYGKRLATASSDHTIKIIGVSNTASQHLATLTGHQGPVWQ 60

Query: 439 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVIIWNEGNRNEWSQAHVFSEH 260
                                                GRVI+W EGN+NEW+QAHVF +H
Sbjct: 61  VVWAHPKFGSLLASCSFD-------------------GRVIVWKEGNQNEWTQAHVFDDH 101

Query: 259 KVSVNSICWAPHELGLVLACGSSDGNISVFTAGADGGWDTTRIGQAHPAGVTSVSWAPAL 80
           K SVNS+ WAPHELGL LACGSSDGNISVFTA ADGGWDT RI QAHP GVTSVSWAP++
Sbjct: 102 KSSVNSVAWAPHELGLCLACGSSDGNISVFTARADGGWDTARIDQAHPVGVTSVSWAPSM 161

Query: 79  APGAFIGNGSLEPVTKLVSGGCDNTV 2
           APGA +G G L+PV KL SGGCDNTV
Sbjct: 162 APGALVGAGLLDPVQKLCSGGCDNTV 187


>dbj|BAJ10727.1| SEC13 family protein [Lotus japonicus] gi|388515669|gb|AFK45896.1|
           unknown [Lotus japonicus]
          Length = 301

 Score =  252 bits (644), Expect = 3e-65
 Identities = 128/206 (62%), Positives = 140/206 (67%)
 Frame = -3

Query: 619 MPGQKIETGHTDTVHDVVMDYYGKRIATASSDTTIKIVGVSSTASQHHATXXXXXXXXXX 440
           MP QK+ETGH DTVHDV MDYYGKR+ATASSD TIKI+GVS+TASQH AT          
Sbjct: 1   MPAQKVETGHQDTVHDVAMDYYGKRLATASSDHTIKIIGVSNTASQHLATLAGHQGPVWQ 60

Query: 439 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVIIWNEGNRNEWSQAHVFSEH 260
                                                GRVIIW EGN+NEW QAHVF +H
Sbjct: 61  VAWAHPKFGSMIASCSYD-------------------GRVIIWKEGNQNEWIQAHVFDDH 101

Query: 259 KVSVNSICWAPHELGLVLACGSSDGNISVFTAGADGGWDTTRIGQAHPAGVTSVSWAPAL 80
           K SVNS+ WAPHELGL LACGSSDGNISVFTA ADGGWDT+RI QAHP GVTSVSWAP++
Sbjct: 102 KSSVNSVVWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSM 161

Query: 79  APGAFIGNGSLEPVTKLVSGGCDNTV 2
           APGA +G G L+PV KL SGGCDNTV
Sbjct: 162 APGALVGAGLLDPVQKLCSGGCDNTV 187


>emb|CAN79974.1| hypothetical protein VITISV_009154 [Vitis vinifera]
          Length = 312

 Score =  252 bits (643), Expect = 5e-65
 Identities = 126/206 (61%), Positives = 143/206 (69%)
 Frame = -3

Query: 619 MPGQKIETGHTDTVHDVVMDYYGKRIATASSDTTIKIVGVSSTASQHHATXXXXXXXXXX 440
           MP QKI+TGH DTVHDV MDYYGKR+ATASSD+TIKI+GVS+ ASQH +T          
Sbjct: 1   MPSQKIKTGHQDTVHDVAMDYYGKRVATASSDSTIKIIGVSNNASQHLSTLTGHQGPVWQ 60

Query: 439 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVIIWNEGNRNEWSQAHVFSEH 260
                                                GRVIIW EGN+N+W+QAHVFS+H
Sbjct: 61  VAWAHPKFGSILASCSHD-------------------GRVIIWKEGNQNDWTQAHVFSDH 101

Query: 259 KVSVNSICWAPHELGLVLACGSSDGNISVFTAGADGGWDTTRIGQAHPAGVTSVSWAPAL 80
           K SVNSI WAPHELGL LACGSSDGNISVFTA +DG WDTT+I QAHP GVTSVSWAP++
Sbjct: 102 KSSVNSIAWAPHELGLCLACGSSDGNISVFTARSDGAWDTTKIDQAHPVGVTSVSWAPSM 161

Query: 79  APGAFIGNGSLEPVTKLVSGGCDNTV 2
           APGA +G+G L+PV KLVSGGCDNTV
Sbjct: 162 APGALVGSGLLDPVQKLVSGGCDNTV 187


>emb|CAN63472.1| hypothetical protein VITISV_000787 [Vitis vinifera]
          Length = 313

 Score =  251 bits (641), Expect = 8e-65
 Identities = 126/206 (61%), Positives = 142/206 (68%)
 Frame = -3

Query: 619 MPGQKIETGHTDTVHDVVMDYYGKRIATASSDTTIKIVGVSSTASQHHATXXXXXXXXXX 440
           MP QKI+TGH DTVHDV MDYYGKR+ATASSD+T KI+GVS+ ASQH AT          
Sbjct: 1   MPSQKIKTGHQDTVHDVAMDYYGKRVATASSDSTXKIIGVSNNASQHLATLTGHQGPVWQ 60

Query: 439 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRVIIWNEGNRNEWSQAHVFSEH 260
                                                GRVIIW EGN+N+W+QAHVFS+H
Sbjct: 61  VAWAHPKFGSILASCSCD-------------------GRVIIWKEGNQNDWTQAHVFSDH 101

Query: 259 KVSVNSICWAPHELGLVLACGSSDGNISVFTAGADGGWDTTRIGQAHPAGVTSVSWAPAL 80
           K SVNSI WAPHELGL LACGSSDGNISVFTA +DG WDTT+I QAHP GVTSVSWAP++
Sbjct: 102 KSSVNSIAWAPHELGLCLACGSSDGNISVFTARSDGAWDTTKIDQAHPVGVTSVSWAPSM 161

Query: 79  APGAFIGNGSLEPVTKLVSGGCDNTV 2
           APGA +G+G L+PV KLVSGGCDNTV
Sbjct: 162 APGALVGSGLLDPVQKLVSGGCDNTV 187


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