BLASTX nr result

ID: Coptis25_contig00009500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009500
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001190388.1| ABC1 family protein [Arabidopsis thaliana] g...   111   7e-23
ref|XP_002874225.1| ABC1 family protein [Arabidopsis lyrata subs...   111   7e-23
gb|AAK82520.1| AT5g24810/F6A4_20 [Arabidopsis thaliana]               111   7e-23
ref|NP_568458.1| ABC1 family protein [Arabidopsis thaliana] gi|1...   111   7e-23
ref|XP_002527984.1| Ubiquinone biosynthesis protein coq-8, putat...   110   9e-23

>ref|NP_001190388.1| ABC1 family protein [Arabidopsis thaliana]
           gi|332005982|gb|AED93365.1| ABC1 family protein
           [Arabidopsis thaliana]
          Length = 1040

 Score =  111 bits (277), Expect = 7e-23
 Identities = 48/55 (87%), Positives = 54/55 (98%)
 Frame = +3

Query: 3   RILGVQVCAYKDGKVVIDTAAGVLGRYDPRPIQPDSLFPVFSATKGITAGMLHWL 167
           +ILG+QVCAYKDGKV+IDTAAGVLGRYDPRP+QPDSLFPVFS TKG+TAGM+HWL
Sbjct: 570 KILGIQVCAYKDGKVIIDTAAGVLGRYDPRPVQPDSLFPVFSVTKGVTAGMIHWL 624


>ref|XP_002874225.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320062|gb|EFH50484.1| ABC1 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1011

 Score =  111 bits (277), Expect = 7e-23
 Identities = 48/55 (87%), Positives = 54/55 (98%)
 Frame = +3

Query: 3   RILGVQVCAYKDGKVVIDTAAGVLGRYDPRPIQPDSLFPVFSATKGITAGMLHWL 167
           +ILG+QVCAYKDGKV+IDTAAGVLGRYDPRP+QPDSLFPVFS TKG+TAGM+HWL
Sbjct: 539 KILGIQVCAYKDGKVIIDTAAGVLGRYDPRPVQPDSLFPVFSVTKGVTAGMIHWL 593


>gb|AAK82520.1| AT5g24810/F6A4_20 [Arabidopsis thaliana]
          Length = 690

 Score =  111 bits (277), Expect = 7e-23
 Identities = 48/55 (87%), Positives = 54/55 (98%)
 Frame = +3

Query: 3   RILGVQVCAYKDGKVVIDTAAGVLGRYDPRPIQPDSLFPVFSATKGITAGMLHWL 167
           +ILG+QVCAYKDGKV+IDTAAGVLGRYDPRP+QPDSLFPVFS TKG+TAGM+HWL
Sbjct: 309 KILGIQVCAYKDGKVIIDTAAGVLGRYDPRPVQPDSLFPVFSVTKGVTAGMIHWL 363


>ref|NP_568458.1| ABC1 family protein [Arabidopsis thaliana]
           gi|16649083|gb|AAL24393.1| Unknown protein [Arabidopsis
           thaliana] gi|33589758|gb|AAQ22645.1| At5g24810/F6A4.20
           [Arabidopsis thaliana] gi|332005981|gb|AED93364.1| ABC1
           family protein [Arabidopsis thaliana]
          Length = 1009

 Score =  111 bits (277), Expect = 7e-23
 Identities = 48/55 (87%), Positives = 54/55 (98%)
 Frame = +3

Query: 3   RILGVQVCAYKDGKVVIDTAAGVLGRYDPRPIQPDSLFPVFSATKGITAGMLHWL 167
           +ILG+QVCAYKDGKV+IDTAAGVLGRYDPRP+QPDSLFPVFS TKG+TAGM+HWL
Sbjct: 539 KILGIQVCAYKDGKVIIDTAAGVLGRYDPRPVQPDSLFPVFSVTKGVTAGMIHWL 593


>ref|XP_002527984.1| Ubiquinone biosynthesis protein coq-8, putative [Ricinus communis]
           gi|223532610|gb|EEF34396.1| Ubiquinone biosynthesis
           protein coq-8, putative [Ricinus communis]
          Length = 965

 Score =  110 bits (276), Expect = 9e-23
 Identities = 49/55 (89%), Positives = 54/55 (98%)
 Frame = +3

Query: 3   RILGVQVCAYKDGKVVIDTAAGVLGRYDPRPIQPDSLFPVFSATKGITAGMLHWL 167
           +ILG+QVCAYKDG+V+IDTAAGVLGRYDPRP+QPDSLFPVFS TKGITAGMLHWL
Sbjct: 492 KILGIQVCAYKDGEVIIDTAAGVLGRYDPRPVQPDSLFPVFSVTKGITAGMLHWL 546


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