BLASTX nr result
ID: Coptis25_contig00009479
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00009479
(1703 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 492 e-136
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera] 470 e-130
ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group] g... 432 e-118
gb|EEC83408.1| hypothetical protein OsI_28861 [Oryza sativa Indi... 432 e-118
dbj|BAK04994.1| predicted protein [Hordeum vulgare subsp. vulgare] 426 e-117
>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 [Vitis vinifera] gi|296090002|emb|CBI39821.3| unnamed
protein product [Vitis vinifera]
Length = 602
Score = 492 bits (1266), Expect = e-136
Identities = 253/384 (65%), Positives = 301/384 (78%), Gaps = 1/384 (0%)
Frame = -2
Query: 1210 QVVMRAKYKTSVKDPGVQGVLIMMEDKFSFTPDDPTSSVKLNVGVGSIQKHQFTKEGNHK 1031
+V+ RA+YKTSVKD GV GVL M EDKF F P+DPTSS + +V I+ H+F+K G++K
Sbjct: 4 EVLKRARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSNK 63
Query: 1030 QALLNLTIDPSIKAGGCIFEFEKFSERDVCRDFVSKVLTKLQATKSSGKDPKLVSEKSGD 851
ALLNLT D S K GG IFEFE + +R+VCR+FV + L K +G + V K D
Sbjct: 64 PALLNLTQD-SEKGGGYIFEFENYPDREVCREFVGRALAKFSEASKAGSEQSAV--KLFD 120
Query: 850 EQLSTAEMELRMKLLQEDSDLQKLHKQFVISGVLTETEFWATRKELLVADVRKAPKQQVG 671
EQLST EME R+KLL+EDS+LQKLHKQFV+SGVLTE EFWATRK+LL + + KQ+VG
Sbjct: 121 EQLSTIEMERRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVG 180
Query: 670 FKSAMIADVRPLTDGRSNKVTFNLTPEIIHQIFAEKPAVHKAYLSFVPRKMSEMDFWTKY 491
FKSAMI+D++PLTDGR+N+VTFNLTPEIIHQIFAEKPAVH+A+L+FVP KM+E DFW KY
Sbjct: 181 FKSAMISDLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKY 240
Query: 490 CRAEYLHRTRNXXXXXXXXXXXXXXAVFLKHDEILANEARRKLRRVDPTLDMEADEGDDY 311
CRAEYLH TRN AVFLKHD+ILANEARRK+RRVDPTLDMEAD+GDDY
Sbjct: 241 CRAEYLHCTRNTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDY 300
Query: 310 MHLPDHGILRDGCKEAIDSEYDEYRRTLSQNLNRHAAVVLEGRALDVALGDTRTVAEALS 131
MHLPDHGI RDG KE ID +Y++YRRTLSQ+LNRHAAVVLEGR +DV L DTRTVAEAL+
Sbjct: 301 MHLPDHGIFRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALA 360
Query: 130 RSKQAELA-ENLDKNAARARLERV 62
+SK+ E A E D + R RLER+
Sbjct: 361 KSKRVEAANEKSDGSVTRERLERI 384
>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
Length = 735
Score = 470 bits (1210), Expect = e-130
Identities = 253/427 (59%), Positives = 301/427 (70%), Gaps = 44/427 (10%)
Frame = -2
Query: 1210 QVVMRAKYKTSVKDPGVQGVLIMMEDKFSFTPDDPTSSVKLNVGVGSIQKHQFTKEGNHK 1031
+V+ RA+YKTSVKD GV GVL M EDKF F P+DPTSS + +V I+ H+F+K G++K
Sbjct: 4 EVLKRARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSNK 63
Query: 1030 QALLNLTIDPSIKAGGCIFEFEKFSERDVCRDFVSKVLTKLQATKSSGKDPKLVSEKSGD 851
ALLNLT D S K GG IFEFE + +R+VCR+FV K L K +G + V K D
Sbjct: 64 PALLNLTQD-SEKGGGYIFEFENYPDREVCREFVGKALAKFSEASKAGSEQSAV--KLFD 120
Query: 850 EQLSTAEMELRMKLLQED------------------------------------------ 797
EQLST EME R+KLL+ED
Sbjct: 121 EQLSTIEMERRIKLLREDRHSVPEEKFGVLLLKGILPLFGETIIAMKLIDSGIASKVKWD 180
Query: 796 -SDLQKLHKQFVISGVLTETEFWATRKELLVADVRKAPKQQVGFKSAMIADVRPLTDGRS 620
S+LQKLHKQFV+SGVLTE EFWATRK+LL + + KQ+VGFKSAMI+D++PLTDGR+
Sbjct: 181 CSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKSAMISDLKPLTDGRT 240
Query: 619 NKVTFNLTPEIIHQIFAEKPAVHKAYLSFVPRKMSEMDFWTKYCRAEYLHRTRNXXXXXX 440
N+VTFNLTPEIIHQIFAEKPAVH+A+L+FVP KM+E DFW KYCRAEYLH TRN
Sbjct: 241 NRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAEYLHCTRNTVAAAA 300
Query: 439 XXXXXXXXAVFLKHDEILANEARRKLRRVDPTLDMEADEGDDYMHLPDHGILRDGCKEAI 260
AVFLKHD+ILA+EARRK+RRVDPTLDMEAD+GDDYMHLPDHGI RDG KE I
Sbjct: 301 EAAEDEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFRDGSKEII 360
Query: 259 DSEYDEYRRTLSQNLNRHAAVVLEGRALDVALGDTRTVAEALSRSKQAELA-ENLDKNAA 83
D +Y++YRRTLSQ+LNRHAAVVLEGR +DV L DTRTVAEAL++SK+ E A E D +
Sbjct: 361 DPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKSDGSVT 420
Query: 82 RARLERV 62
R RLER+
Sbjct: 421 RERLERI 427
>ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group]
gi|38636938|dbj|BAD03200.1| unknown protein [Oryza sativa
Japonica Group] gi|113623552|dbj|BAF23497.1| Os08g0338200
[Oryza sativa Japonica Group]
gi|215686948|dbj|BAG90767.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 604
Score = 432 bits (1112), Expect = e-118
Identities = 230/382 (60%), Positives = 282/382 (73%), Gaps = 4/382 (1%)
Frame = -2
Query: 1195 AKYKTSVKDPGVQGVLIMMEDKFSFTPDDPTSSVKLNVGVGSIQKHQFTKEGNHKQA--L 1022
AKYKT++KDPG GVL M EDKF+FTP DP S++KLNV SI+ H+F K K A L
Sbjct: 8 AKYKTTLKDPGTTGVLRMNEDKFTFTPHDPRSAMKLNVDFRSIKGHKFNKVDGSKPAPPL 67
Query: 1021 LNLTIDPSIKAGGCIFEFEKFSERDVCRDFVSKVLTKLQAT--KSSGKDPKLVSEKSGDE 848
LNL+ D S K GG +FEF+ + RD+ RDFV+KVL K Q T P+ +G+E
Sbjct: 68 LNLSKD-SDKGGGYMFEFDNVTNRDLSRDFVAKVLGKQQGTIPPKPNVPPENSVTSTGEE 126
Query: 847 QLSTAEMELRMKLLQEDSDLQKLHKQFVISGVLTETEFWATRKELLVADVRKAPKQQVGF 668
QLS AEM+ RMKLLQEDS+LQKLH +FV+ +L E+EFWATRK LL + K KQ+ GF
Sbjct: 127 QLSAAEMQRRMKLLQEDSELQKLHMKFVLGNILQESEFWATRKNLLEDEANKGSKQRPGF 186
Query: 667 KSAMIADVRPLTDGRSNKVTFNLTPEIIHQIFAEKPAVHKAYLSFVPRKMSEMDFWTKYC 488
KSAM+ADVRP DGR+NKVTF+LT EIIHQIFAEKPAVH+A+L FVP+KMSE DFWTKY
Sbjct: 187 KSAMLADVRPSADGRTNKVTFSLTTEIIHQIFAEKPAVHRAFLDFVPKKMSEKDFWTKYF 246
Query: 487 RAEYLHRTRNXXXXXXXXXXXXXXAVFLKHDEILANEARRKLRRVDPTLDMEADEGDDYM 308
RAEYL RT+N A+FLK+D+ILA EAR K++RVDPTLDMEAD GDDY+
Sbjct: 247 RAEYLLRTKNTVAATAEAAEDEELAIFLKNDDILAKEARLKIKRVDPTLDMEADAGDDYI 306
Query: 307 HLPDHGILRDGCKEAIDSEYDEYRRTLSQNLNRHAAVVLEGRALDVALGDTRTVAEALSR 128
HLPDHGI+RDG KE ID++ + RRTLSQ+LNRHAAVVLEGR+ DV L DT+TVAEA++R
Sbjct: 307 HLPDHGIIRDGSKETIDNDGELARRTLSQDLNRHAAVVLEGRSSDVELTDTKTVAEAIAR 366
Query: 127 SKQAELAENLDKNAARARLERV 62
SK+ + ++ + RL +V
Sbjct: 367 SKKEPPSSSISDDTNHERLVKV 388
>gb|EEC83408.1| hypothetical protein OsI_28861 [Oryza sativa Indica Group]
gi|222640385|gb|EEE68517.1| hypothetical protein
OsJ_26954 [Oryza sativa Japonica Group]
Length = 625
Score = 432 bits (1112), Expect = e-118
Identities = 230/382 (60%), Positives = 282/382 (73%), Gaps = 4/382 (1%)
Frame = -2
Query: 1195 AKYKTSVKDPGVQGVLIMMEDKFSFTPDDPTSSVKLNVGVGSIQKHQFTKEGNHKQA--L 1022
AKYKT++KDPG GVL M EDKF+FTP DP S++KLNV SI+ H+F K K A L
Sbjct: 8 AKYKTTLKDPGTTGVLRMNEDKFTFTPHDPRSAMKLNVDFRSIKGHKFNKVDGSKPAPPL 67
Query: 1021 LNLTIDPSIKAGGCIFEFEKFSERDVCRDFVSKVLTKLQAT--KSSGKDPKLVSEKSGDE 848
LNL+ D S K GG +FEF+ + RD+ RDFV+KVL K Q T P+ +G+E
Sbjct: 68 LNLSKD-SDKGGGYMFEFDNVTNRDLSRDFVAKVLGKQQGTIPPKPNVPPENSVTSTGEE 126
Query: 847 QLSTAEMELRMKLLQEDSDLQKLHKQFVISGVLTETEFWATRKELLVADVRKAPKQQVGF 668
QLS AEM+ RMKLLQEDS+LQKLH +FV+ +L E+EFWATRK LL + K KQ+ GF
Sbjct: 127 QLSAAEMQRRMKLLQEDSELQKLHMKFVLGNILQESEFWATRKNLLEDEANKGSKQRPGF 186
Query: 667 KSAMIADVRPLTDGRSNKVTFNLTPEIIHQIFAEKPAVHKAYLSFVPRKMSEMDFWTKYC 488
KSAM+ADVRP DGR+NKVTF+LT EIIHQIFAEKPAVH+A+L FVP+KMSE DFWTKY
Sbjct: 187 KSAMLADVRPSADGRTNKVTFSLTTEIIHQIFAEKPAVHRAFLDFVPKKMSEKDFWTKYF 246
Query: 487 RAEYLHRTRNXXXXXXXXXXXXXXAVFLKHDEILANEARRKLRRVDPTLDMEADEGDDYM 308
RAEYL RT+N A+FLK+D+ILA EAR K++RVDPTLDMEAD GDDY+
Sbjct: 247 RAEYLLRTKNTVAATAEAAEDEELAIFLKNDDILAKEARLKIKRVDPTLDMEADAGDDYI 306
Query: 307 HLPDHGILRDGCKEAIDSEYDEYRRTLSQNLNRHAAVVLEGRALDVALGDTRTVAEALSR 128
HLPDHGI+RDG KE ID++ + RRTLSQ+LNRHAAVVLEGR+ DV L DT+TVAEA++R
Sbjct: 307 HLPDHGIIRDGSKETIDNDGELARRTLSQDLNRHAAVVLEGRSSDVELTDTKTVAEAIAR 366
Query: 127 SKQAELAENLDKNAARARLERV 62
SK+ + ++ + RL +V
Sbjct: 367 SKKEPPSSSISDDTNHERLVKV 388
>dbj|BAK04994.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 426 bits (1095), Expect = e-117
Identities = 224/379 (59%), Positives = 283/379 (74%), Gaps = 4/379 (1%)
Frame = -2
Query: 1195 AKYKTSVKDPGVQGVLIMMEDKFSFTPDDPTSSVKLNVGVGSIQKHQFTKEGNHKQ--AL 1022
AKYK ++KD G GVL M EDKF+FTP+DP S +KL+V +I+ H+F K K AL
Sbjct: 4 AKYKATLKDRGTGGVLRMSEDKFTFTPNDPRSLMKLSVDFQTIKGHKFNKVDGSKPTPAL 63
Query: 1021 LNLTIDPSIKAGGCIFEFEKFSERDVCRDFVSKVLTKLQATKSSGKD--PKLVSEKSGDE 848
LNL+ D S K GG IFEF+ RD+CRDFV++VL K Q T + + P+L + +G E
Sbjct: 64 LNLSKD-SDKGGGYIFEFDNVGNRDLCRDFVARVLGKYQGTVPARPNVPPELSAVSTGPE 122
Query: 847 QLSTAEMELRMKLLQEDSDLQKLHKQFVISGVLTETEFWATRKELLVADVRKAPKQQVGF 668
QLS+AEME RMKLL+EDS+LQKLHK+FV+ +L E+EFWATRK LL + K KQ+ GF
Sbjct: 123 QLSSAEMERRMKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDETSKGSKQKPGF 182
Query: 667 KSAMIADVRPLTDGRSNKVTFNLTPEIIHQIFAEKPAVHKAYLSFVPRKMSEMDFWTKYC 488
KSAM+ADVRP DG++NKVTF+LT EIIHQIFAEKPAVH+A+L +VP+K+SE DFWTKYC
Sbjct: 183 KSAMLADVRPSADGQTNKVTFSLTTEIIHQIFAEKPAVHRAFLDYVPKKLSEKDFWTKYC 242
Query: 487 RAEYLHRTRNXXXXXXXXXXXXXXAVFLKHDEILANEARRKLRRVDPTLDMEADEGDDYM 308
RAEYL RT+N A+FLK+D+ILA EA+ K++RVDPTLDMEAD GDDY+
Sbjct: 243 RAEYLLRTKNTLAAKAEAAEDEELAMFLKNDDILAKEAKLKIKRVDPTLDMEADAGDDYI 302
Query: 307 HLPDHGILRDGCKEAIDSEYDEYRRTLSQNLNRHAAVVLEGRALDVALGDTRTVAEALSR 128
HLPDHGILRDG +E D++ + RRTLSQ+LNRHAAVVLEGR+ D+ DT+TVAEAL+R
Sbjct: 303 HLPDHGILRDGSRETTDTDSELARRTLSQDLNRHAAVVLEGRSADIESTDTKTVAEALAR 362
Query: 127 SKQAELAENLDKNAARARL 71
SK+ ++ +A+ RL
Sbjct: 363 SKKEPPPSSVADDASHERL 381