BLASTX nr result

ID: Coptis25_contig00009475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009475
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530794.1| PREDICTED: phosphoglucomutase, cytoplasmic-l...   101   6e-20
ref|XP_003525238.1| PREDICTED: phosphoglucomutase, cytoplasmic-l...   101   6e-20
ref|NP_001154465.1| phosphoglucomutase [Arabidopsis thaliana] gi...    99   4e-19
ref|NP_177230.1| phosphoglucomutase [Arabidopsis thaliana] gi|12...    99   5e-19
ref|NP_173732.1| putative phosphoglucomutase [Arabidopsis thalia...    98   6e-19

>ref|XP_003530794.1| PREDICTED: phosphoglucomutase, cytoplasmic-like [Glycine max]
          Length = 582

 Score =  101 bits (252), Expect = 6e-20
 Identities = 47/59 (79%), Positives = 53/59 (89%)
 Frame = -2

Query: 179 MVMFKVTRVHTTPIDGQKPGTSGLRKKVKVFKEPHYLHNFVQATFNALSAEKFKGATLV 3
           MV+F V+RV TTP DGQKPGTSGLRKKVKVF +PHYLHNFVQ+TFNAL+ EK +GATLV
Sbjct: 1   MVLFNVSRVETTPFDGQKPGTSGLRKKVKVFVQPHYLHNFVQSTFNALTVEKVRGATLV 59


>ref|XP_003525238.1| PREDICTED: phosphoglucomutase, cytoplasmic-like [Glycine max]
          Length = 582

 Score =  101 bits (252), Expect = 6e-20
 Identities = 47/59 (79%), Positives = 53/59 (89%)
 Frame = -2

Query: 179 MVMFKVTRVHTTPIDGQKPGTSGLRKKVKVFKEPHYLHNFVQATFNALSAEKFKGATLV 3
           MV+F V+RV TTP DGQKPGTSGLRKKVKVF +PHYLHNFVQ+TFNAL+ EK +GATLV
Sbjct: 1   MVLFNVSRVETTPFDGQKPGTSGLRKKVKVFVQPHYLHNFVQSTFNALTVEKVRGATLV 59


>ref|NP_001154465.1| phosphoglucomutase [Arabidopsis thaliana]
           gi|332196986|gb|AEE35107.1| phosphoglucomutase
           [Arabidopsis thaliana]
          Length = 662

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/60 (80%), Positives = 54/60 (90%)
 Frame = -2

Query: 182 KMVMFKVTRVHTTPIDGQKPGTSGLRKKVKVFKEPHYLHNFVQATFNALSAEKFKGATLV 3
           +MV FKV+ V T+PIDGQKPGTSGLRKKVKVFK+P+YL NFVQATFNAL+ EK KGATLV
Sbjct: 77  EMVSFKVSLVSTSPIDGQKPGTSGLRKKVKVFKQPNYLENFVQATFNALTTEKVKGATLV 136


>ref|NP_177230.1| phosphoglucomutase [Arabidopsis thaliana]
           gi|12585324|sp|Q9SGC1.1|PGMC2_ARATH RecName:
           Full=Probable phosphoglucomutase, cytoplasmic 2;
           Short=PGM 2; AltName: Full=Glucose phosphomutase 2
           gi|12324763|gb|AAG52345.1|AC011663_24 putative
           phosphoglucomutase; 31864-35570 [Arabidopsis thaliana]
           gi|19699055|gb|AAL90895.1| At1g70730/F5A18_9
           [Arabidopsis thaliana] gi|27363248|gb|AAO11543.1|
           At1g70730/F5A18_9 [Arabidopsis thaliana]
           gi|110739105|dbj|BAF01469.1| putative phosphoglucomutase
           [Arabidopsis thaliana] gi|332196984|gb|AEE35105.1|
           phosphoglucomutase [Arabidopsis thaliana]
          Length = 585

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/59 (81%), Positives = 53/59 (89%)
 Frame = -2

Query: 179 MVMFKVTRVHTTPIDGQKPGTSGLRKKVKVFKEPHYLHNFVQATFNALSAEKFKGATLV 3
           MV FKV+ V T+PIDGQKPGTSGLRKKVKVFK+P+YL NFVQATFNAL+ EK KGATLV
Sbjct: 1   MVSFKVSLVSTSPIDGQKPGTSGLRKKVKVFKQPNYLENFVQATFNALTTEKVKGATLV 59


>ref|NP_173732.1| putative phosphoglucomutase [Arabidopsis thaliana]
           gi|322510058|sp|O49299.2|PGMC1_ARATH RecName:
           Full=Probable phosphoglucomutase, cytoplasmic 1;
           Short=PGM 1; AltName: Full=Glucose phosphomutase 1
           gi|16649113|gb|AAL24408.1| phosphoglucomutase
           [Arabidopsis thaliana] gi|20148521|gb|AAM10151.1|
           phosphoglucomutase [Arabidopsis thaliana]
           gi|332192232|gb|AEE30353.1| putative phosphoglucomutase
           [Arabidopsis thaliana]
          Length = 583

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 47/58 (81%), Positives = 54/58 (93%)
 Frame = -2

Query: 176 VMFKVTRVHTTPIDGQKPGTSGLRKKVKVFKEPHYLHNFVQATFNALSAEKFKGATLV 3
           ++FKV+ V T+PIDGQKPGTSGLRKKVKVFK+P+YL NFVQATFNAL+AEK KGATLV
Sbjct: 1   MVFKVSTVSTSPIDGQKPGTSGLRKKVKVFKQPNYLENFVQATFNALTAEKVKGATLV 58


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