BLASTX nr result

ID: Coptis25_contig00009474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009474
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314045.1| predicted protein [Populus trichocarpa] gi|2...   103   3e-20
ref|XP_002517807.1| conserved hypothetical protein [Ricinus comm...    99   1e-18
gb|AFK47750.1| unknown [Lotus japonicus]                               86   5e-15
gb|EAY89056.1| hypothetical protein OsI_10540 [Oryza sativa Indi...    78   2e-12
ref|NP_001173314.1| Os03g0217000 [Oryza sativa Japonica Group] g...    77   2e-12

>ref|XP_002314045.1| predicted protein [Populus trichocarpa] gi|222850453|gb|EEE88000.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score =  103 bits (257), Expect = 3e-20
 Identities = 54/97 (55%), Positives = 67/97 (69%)
 Frame = +1

Query: 211 RPTSRPYISCYCQSHETIRFSLEPKKKNEEEKVSRNMFLKLYAGLENFGKRLKESMSPKT 390
           R   R  I   CQ  E I  S    KK  E K  + +  +L+  +ENFGK LK+++SPK 
Sbjct: 23  RNCPRILILLSCQRGEPIDTSSSKPKK--EIKQDKQLVRQLFGSVENFGKGLKDNLSPKR 80

Query: 391 KGDWKDVLLMSISFAVYVYMSQKIVTAYCSWISILKQ 501
           KGDWKDV+LMS+SFAVYVYMSQKIV AYC+W+S+LKQ
Sbjct: 81  KGDWKDVMLMSLSFAVYVYMSQKIVCAYCAWMSMLKQ 117


>ref|XP_002517807.1| conserved hypothetical protein [Ricinus communis]
           gi|223543079|gb|EEF44614.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 120

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 52/111 (46%), Positives = 70/111 (63%), Gaps = 5/111 (4%)
 Frame = +1

Query: 184 FYHTSNFTI-----RPTSRPYISCYCQSHETIRFSLEPKKKNEEEKVSRNMFLKLYAGLE 348
           F H  N ++     R   R  +   CQ  E I  S  PK K E ++  + M  +L+   E
Sbjct: 9   FLHNKNSSVQLLKTRSNPRIIVHLSCQRDEPIDSS-SPKVKEEMKQEKQVMVRQLFVSAE 67

Query: 349 NFGKRLKESMSPKTKGDWKDVLLMSISFAVYVYMSQKIVTAYCSWISILKQ 501
            F K +K+++SPK KGDWKDV+LMS+SFAVYVY+SQ+IV AYC+W S+LKQ
Sbjct: 68  KFAKGVKDNLSPKQKGDWKDVVLMSLSFAVYVYISQQIVCAYCAWTSMLKQ 118


>gb|AFK47750.1| unknown [Lotus japonicus]
          Length = 123

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 46/100 (46%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = +1

Query: 202 FTIRPTSRPYISCYCQSHETIRFSLEPKKKNEEE-KVSRNMFLKLYAGLENFGKRLKESM 378
           FT R + R +I   CQ       S   +KK+    K+   +  K+  G E  GKR ++++
Sbjct: 21  FTNRTSPRIFILVACQGGRLASNSNPDEKKDMRGGKLINLLKWKVLNGFEKLGKRPEQNL 80

Query: 379 SPKTKGDWKDVLLMSISFAVYVYMSQKIVTAYCSWISILK 498
           SPK KGDWKD+ LMSISFA+YVY+SQK+V AYC+W S+ K
Sbjct: 81  SPKQKGDWKDLFLMSISFALYVYISQKLVCAYCAWTSLPK 120


>gb|EAY89056.1| hypothetical protein OsI_10540 [Oryza sativa Indica Group]
          Length = 143

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 34/59 (57%), Positives = 45/59 (76%)
 Frame = +1

Query: 319 MFLKLYAGLENFGKRLKESMSPKTKGDWKDVLLMSISFAVYVYMSQKIVTAYCSWISIL 495
           M  +++      G+ ++ES+SPK KGDWKDV LMS SFAVYVY+SQKIV  YC+WIS++
Sbjct: 83  MVERVFGDAAKAGRAVRESLSPKQKGDWKDVTLMSFSFAVYVYISQKIVCTYCAWISMI 141


>ref|NP_001173314.1| Os03g0217000 [Oryza sativa Japonica Group]
           gi|108706860|gb|ABF94655.1| expressed protein [Oryza
           sativa Japonica Group] gi|125585410|gb|EAZ26074.1|
           hypothetical protein OsJ_09928 [Oryza sativa Japonica
           Group] gi|255674313|dbj|BAH92042.1| Os03g0217000 [Oryza
           sativa Japonica Group]
          Length = 143

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 33/56 (58%), Positives = 44/56 (78%)
 Frame = +1

Query: 328 KLYAGLENFGKRLKESMSPKTKGDWKDVLLMSISFAVYVYMSQKIVTAYCSWISIL 495
           +++      G+ ++ES+SPK KGDWKDV LMS SFAVYVY+SQKIV  YC+WIS++
Sbjct: 86  RVFGDAAKAGRAVRESLSPKQKGDWKDVTLMSFSFAVYVYISQKIVCTYCAWISMI 141


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