BLASTX nr result

ID: Coptis25_contig00009473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009473
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285241.1| PREDICTED: uncharacterized protein LOC100245...   218   1e-54
ref|NP_001235781.1| uncharacterized protein LOC100499770 [Glycin...   205   1e-50
ref|XP_003604393.1| hypothetical protein MTR_4g010330 [Medicago ...   199   1e-48
ref|XP_002285114.1| PREDICTED: uncharacterized protein LOC100254...   189   4e-47
gb|ABK26133.1| unknown [Picea sitchensis]                             183   7e-46

>ref|XP_002285241.1| PREDICTED: uncharacterized protein LOC100245670 [Vitis vinifera]
           gi|297738963|emb|CBI28208.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  218 bits (556), Expect = 1e-54
 Identities = 106/174 (60%), Positives = 124/174 (71%), Gaps = 1/174 (0%)
 Frame = +3

Query: 114 LYGNRGCLGCCTKATPIIAVDEPSKGLKIQGRTVKKPSISEDFWSTSTCEMDXXXXXXXX 293
           ++G+RGCLGCCTK TPIIAVDEPSKGL+IQGRTVKKPSISEDFWSTSTCE+D        
Sbjct: 1   MHGSRGCLGCCTKPTPIIAVDEPSKGLRIQGRTVKKPSISEDFWSTSTCEIDNSTVQSQR 60

Query: 294 XXXXXXXXXXXLEAHCGLGSTSSPTEFVNHGYILWNQTRQQWIGN-RPRNRTHHVREPRL 470
                      L  + G+GSTS+ +EF+NHG +LWNQTR QW+GN R  N++  +REPRL
Sbjct: 61  SISSISTSNQSLTHYSGIGSTSNNSEFINHGLLLWNQTRLQWVGNKRSENQSQQIREPRL 120

Query: 471 RNYCLCNVKSFWLCSWNVTYDSLLGTNKPFPQPITLSEMVDFLVDVWEQEGMYD 632
           R              WN TY+ LLGTN+ F QPI LSEM+DFLVDVWEQEGMYD
Sbjct: 121 R--------------WNATYEGLLGTNRRFSQPIPLSEMIDFLVDVWEQEGMYD 160


>ref|NP_001235781.1| uncharacterized protein LOC100499770 [Glycine max]
           gi|255626433|gb|ACU13561.1| unknown [Glycine max]
          Length = 174

 Score =  205 bits (521), Expect = 1e-50
 Identities = 95/170 (55%), Positives = 120/170 (70%), Gaps = 2/170 (1%)
 Frame = +3

Query: 129 GCLGCCTKATPIIAVDEPSKGLKIQGRTVKKPSISEDFWSTSTCEMDXXXXXXXXXXXXX 308
           GC+GC  + +    VD PSKGL  Q   V+KPS SEDFW+TST +MD             
Sbjct: 5   GCVGCYKRPSLSPTVDVPSKGLATQSNVVRKPSSSEDFWTTSTHDMDNSAVQSQGSISSA 64

Query: 309 XXXXXXLEAHCGLG-STSSPTEFVNHGYILWNQTRQQWIGNR-PRNRTHHVREPRLRNYC 482
                 + +H G   S+++PTEFVNHG ILWNQTRQ+W+GN+ P N+T  ++EP+LR YC
Sbjct: 65  SLTNQAVVSHAGSSKSSTNPTEFVNHGVILWNQTRQRWVGNKKPENQTQQLQEPKLRTYC 124

Query: 483 LCNVKSFWLCSWNVTYDSLLGTNKPFPQPITLSEMVDFLVDVWEQEGMYD 632
           LC  K+FWLCSWN TY+SLLG+NKPF QPI L+EMVDFLVD+WEQ+G+YD
Sbjct: 125 LCLAKNFWLCSWNATYESLLGSNKPFRQPIPLAEMVDFLVDIWEQDGLYD 174


>ref|XP_003604393.1| hypothetical protein MTR_4g010330 [Medicago truncatula]
           gi|355505448|gb|AES86590.1| hypothetical protein
           MTR_4g010330 [Medicago truncatula]
          Length = 288

 Score =  199 bits (505), Expect = 1e-48
 Identities = 95/173 (54%), Positives = 119/173 (68%), Gaps = 1/173 (0%)
 Frame = +3

Query: 117 YGNRGCLGCCTKATPIIAVDEPSKGLKIQGRTVKKPSISEDFWSTSTCEMDXXXXXXXXX 296
           YG+ GC+GC  K   ++ V+ PS GL  QG+ V KPS SEDFW+TST +MD         
Sbjct: 119 YGSSGCVGCY-KRPALVTVEVPSTGLTKQGKAVDKPSTSEDFWTTSTHDMDNSAVQSQGS 177

Query: 297 XXXXXXXXXXLEAHCGLGSTSSPTEFVNHGYILWNQTRQQWIGNR-PRNRTHHVREPRLR 473
                     + AH    S+++P+EFVNHG ILWNQTRQ+W+GN+ P NRT  +REP+LR
Sbjct: 178 ISSTSLTNQAVAAHAS--SSNNPSEFVNHGLILWNQTRQRWVGNKKPENRTQQLREPKLR 235

Query: 474 NYCLCNVKSFWLCSWNVTYDSLLGTNKPFPQPITLSEMVDFLVDVWEQEGMYD 632
            Y  C  K FWLCSWN TY+SLL +NKPF QPI L+EMVDFLVD+WEQ+G+YD
Sbjct: 236 TYFQCLAKFFWLCSWNATYESLLTSNKPFRQPIPLAEMVDFLVDIWEQDGLYD 288


>ref|XP_002285114.1| PREDICTED: uncharacterized protein LOC100254371 isoform 1 [Vitis
           vinifera]
          Length = 173

 Score =  189 bits (480), Expect(2) = 4e-47
 Identities = 95/168 (56%), Positives = 105/168 (62%)
 Frame = +3

Query: 129 GCLGCCTKATPIIAVDEPSKGLKIQGRTVKKPSISEDFWSTSTCEMDXXXXXXXXXXXXX 308
           GCLGCC+K T II V E  KGL IQGRT  +PS  EDFWSTST EMD             
Sbjct: 20  GCLGCCSKPTEIIGVYESPKGLTIQGRTAMRPSPVEDFWSTSTGEMDNSAVQSQGSISSI 79

Query: 309 XXXXXXLEAHCGLGSTSSPTEFVNHGYILWNQTRQQWIGNRPRNRTHHVREPRLRNYCLC 488
                  + H   GSTS+P EFVNHG +LWNQTRQQWIGN+       V+EPR+      
Sbjct: 80  STSNQTFDPHSNAGSTSNPPEFVNHGLLLWNQTRQQWIGNQKSQNRKQVQEPRI------ 133

Query: 489 NVKSFWLCSWNVTYDSLLGTNKPFPQPITLSEMVDFLVDVWEQEGMYD 632
                   SWN TY+SLLGTNKP PQPI L EMVDFLVDVWEQEG+YD
Sbjct: 134 --------SWNATYESLLGTNKPLPQPIPLPEMVDFLVDVWEQEGLYD 173



 Score = 26.2 bits (56), Expect(2) = 4e-47
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 67  MLLGRSIGAWIRHFFACMG 123
           M + RS+ +WI H  ACMG
Sbjct: 1   MQICRSVPSWICHIVACMG 19


>gb|ABK26133.1| unknown [Picea sitchensis]
          Length = 172

 Score =  183 bits (465), Expect(2) = 7e-46
 Identities = 93/168 (55%), Positives = 110/168 (65%)
 Frame = +3

Query: 129 GCLGCCTKATPIIAVDEPSKGLKIQGRTVKKPSISEDFWSTSTCEMDXXXXXXXXXXXXX 308
           GCLG C K TPIIAVDEPSK LK+QGR++K PS SEDFWS+ST EMD             
Sbjct: 20  GCLGGCAKPTPIIAVDEPSKRLKVQGRSLKGPSFSEDFWSSSTNEMDNSTVQSQRSVSSI 79

Query: 309 XXXXXXLEAHCGLGSTSSPTEFVNHGYILWNQTRQQWIGNRPRNRTHHVREPRLRNYCLC 488
                  ++     + ++ TEFVNH  ILWN+ RQQW+G+RPRN T  +REP L      
Sbjct: 80  SASNQNSDSRAA-NTNANNTEFVNHALILWNEMRQQWVGDRPRNHTRQLREPVL------ 132

Query: 489 NVKSFWLCSWNVTYDSLLGTNKPFPQPITLSEMVDFLVDVWEQEGMYD 632
                   SWN TY+SLLGTN+PFPQ I LSEMV+FLVDVWEQEG+YD
Sbjct: 133 --------SWNTTYESLLGTNRPFPQLIPLSEMVEFLVDVWEQEGLYD 172



 Score = 27.7 bits (60), Expect(2) = 7e-46
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 67  MLLGRSIGAWIRHFFACMG 123
           ML+ + + AW RH  ACMG
Sbjct: 1   MLIPKVMRAWFRHIIACMG 19


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