BLASTX nr result

ID: Coptis25_contig00009466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009466
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139813.1| PREDICTED: eukaryotic translation initiation...   105   5e-21
emb|CBI25434.3| unnamed protein product [Vitis vinifera]              105   5e-21
ref|XP_002531243.1| eukaryotic translation initiation factor, pu...   105   5e-21
gb|ABK22081.1| unknown [Picea sitchensis]                             105   5e-21
ref|XP_002276751.1| PREDICTED: eukaryotic translation initiation...   105   5e-21

>ref|XP_004139813.1| PREDICTED: eukaryotic translation initiation factor 2 subunit
           alpha-like [Cucumis sativus]
           gi|449492599|ref|XP_004159044.1| PREDICTED: eukaryotic
           translation initiation factor 2 subunit alpha-like
           [Cucumis sativus]
          Length = 344

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/57 (85%), Positives = 53/57 (92%)
 Frame = -2

Query: 287 PLKIQAHIEMKCFQMDGVLHIKAAMRKAEAAGNEDCPVKMKLVAPPLYALTTQTLDK 117
           PLK++A IEMKCFQ DGVLHIK AMRKAEAAGN+DCPVK+KLVAPPLY LTTQTLDK
Sbjct: 204 PLKVRADIEMKCFQFDGVLHIKEAMRKAEAAGNDDCPVKIKLVAPPLYVLTTQTLDK 260


>emb|CBI25434.3| unnamed protein product [Vitis vinifera]
          Length = 229

 Score =  105 bits (261), Expect = 5e-21
 Identities = 50/57 (87%), Positives = 53/57 (92%)
 Frame = -2

Query: 287 PLKIQAHIEMKCFQMDGVLHIKAAMRKAEAAGNEDCPVKMKLVAPPLYALTTQTLDK 117
           PLKI+A IEMKCFQ DGVLHIK AMRKAEAAGN+DCPVK+KLVAPPLY LTTQTLDK
Sbjct: 89  PLKIRADIEMKCFQFDGVLHIKEAMRKAEAAGNKDCPVKIKLVAPPLYVLTTQTLDK 145


>ref|XP_002531243.1| eukaryotic translation initiation factor, putative [Ricinus
           communis] gi|223529162|gb|EEF31140.1| eukaryotic
           translation initiation factor, putative [Ricinus
           communis]
          Length = 344

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/60 (85%), Positives = 54/60 (90%)
 Frame = -2

Query: 287 PLKIQAHIEMKCFQMDGVLHIKAAMRKAEAAGNEDCPVKMKLVAPPLYALTTQTLDKCWG 108
           PLKI+A IEMKCFQ DGVLHIK AMRKAEAAGN+DCPVK+KLVAPPLY LTTQTLDK  G
Sbjct: 204 PLKIRADIEMKCFQFDGVLHIKDAMRKAEAAGNKDCPVKIKLVAPPLYVLTTQTLDKDQG 263


>gb|ABK22081.1| unknown [Picea sitchensis]
          Length = 343

 Score =  105 bits (261), Expect = 5e-21
 Identities = 50/57 (87%), Positives = 53/57 (92%)
 Frame = -2

Query: 287 PLKIQAHIEMKCFQMDGVLHIKAAMRKAEAAGNEDCPVKMKLVAPPLYALTTQTLDK 117
           PLKI+A IEMKCFQ DGVLHIK AMRKAEAAGN+DCPVK+KLVAPPLY LTTQTLDK
Sbjct: 204 PLKIRADIEMKCFQFDGVLHIKDAMRKAEAAGNDDCPVKIKLVAPPLYVLTTQTLDK 260


>ref|XP_002276751.1| PREDICTED: eukaryotic translation initiation factor 2 subunit alpha
           [Vitis vinifera]
          Length = 344

 Score =  105 bits (261), Expect = 5e-21
 Identities = 50/57 (87%), Positives = 53/57 (92%)
 Frame = -2

Query: 287 PLKIQAHIEMKCFQMDGVLHIKAAMRKAEAAGNEDCPVKMKLVAPPLYALTTQTLDK 117
           PLKI+A IEMKCFQ DGVLHIK AMRKAEAAGN+DCPVK+KLVAPPLY LTTQTLDK
Sbjct: 204 PLKIRADIEMKCFQFDGVLHIKEAMRKAEAAGNKDCPVKIKLVAPPLYVLTTQTLDK 260


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