BLASTX nr result

ID: Coptis25_contig00009465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009465
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001049829.1| Os03g0296400 [Oryza sativa Japonica Group] g...    55   1e-05

>ref|NP_001049829.1| Os03g0296400 [Oryza sativa Japonica Group]
           gi|108707648|gb|ABF95443.1| Eukaryotic translation
           initiation factor 2 alpha subunit family protein,
           expressed [Oryza sativa Japonica Group]
           gi|113548300|dbj|BAF11743.1| Os03g0296400 [Oryza sativa
           Japonica Group] gi|125585924|gb|EAZ26588.1| hypothetical
           protein OsJ_10487 [Oryza sativa Japonica Group]
           gi|215679025|dbj|BAG96455.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215707003|dbj|BAG93463.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 339

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 8/66 (12%)
 Frame = -3

Query: 615 SAEIELHKGKVVVKEAPRAVSERDDQKFAKPV--------DXXXXXXXXXXEDTGMGEID 460
           +AEIE HKGK++VKEAPRAVSER+D+ F + +        +          EDTGMG+ID
Sbjct: 271 TAEIEKHKGKLIVKEAPRAVSEREDKLFNEHIETLNEQNAEVDGDADSEEEEDTGMGDID 330

Query: 459 FENAAI 442
             N+ +
Sbjct: 331 LTNSGV 336


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