BLASTX nr result

ID: Coptis25_contig00009463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009463
         (1114 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE44289.1| beta-tubulin [Dimocarpus longan]                       568   e-159
sp|Q40106.1|TBB2_LUPAL RecName: Full=Tubulin beta-2 chain; AltNa...   568   e-159
gb|AFN53689.1| putative tubulin beta-1 chain protein [Linum usit...   568   e-159
ref|XP_003556108.1| PREDICTED: tubulin beta-1 chain-like [Glycin...   568   e-159
ref|XP_003536467.1| PREDICTED: tubulin beta-1 chain-like [Glycin...   568   e-159

>gb|AGE44289.1| beta-tubulin [Dimocarpus longan]
          Length = 446

 Score =  568 bits (1463), Expect = e-159
 Identities = 278/278 (100%), Positives = 278/278 (100%)
 Frame = +2

Query: 281  KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 460
            KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR
Sbjct: 154  KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213

Query: 461  TLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL 640
            TLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL
Sbjct: 214  TLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL 273

Query: 641  TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 820
            TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV
Sbjct: 274  TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 333

Query: 821  QNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA 1000
            QNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA
Sbjct: 334  QNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA 393

Query: 1001 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAD 1114
            FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAD
Sbjct: 394  FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAD 431


>sp|Q40106.1|TBB2_LUPAL RecName: Full=Tubulin beta-2 chain; AltName: Full=Beta-2-tubulin
            gi|1399450|gb|AAB03267.1| beta-tubulin 2 [Lupinus albus]
          Length = 448

 Score =  568 bits (1463), Expect = e-159
 Identities = 278/278 (100%), Positives = 278/278 (100%)
 Frame = +2

Query: 281  KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 460
            KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR
Sbjct: 154  KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213

Query: 461  TLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL 640
            TLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL
Sbjct: 214  TLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL 273

Query: 641  TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 820
            TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV
Sbjct: 274  TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 333

Query: 821  QNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA 1000
            QNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA
Sbjct: 334  QNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA 393

Query: 1001 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAD 1114
            FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAD
Sbjct: 394  FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAD 431


>gb|AFN53689.1| putative tubulin beta-1 chain protein [Linum usitatissimum]
          Length = 449

 Score =  568 bits (1463), Expect = e-159
 Identities = 278/278 (100%), Positives = 278/278 (100%)
 Frame = +2

Query: 281  KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 460
            KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR
Sbjct: 154  KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213

Query: 461  TLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL 640
            TLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL
Sbjct: 214  TLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL 273

Query: 641  TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 820
            TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV
Sbjct: 274  TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 333

Query: 821  QNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA 1000
            QNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA
Sbjct: 334  QNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA 393

Query: 1001 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAD 1114
            FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAD
Sbjct: 394  FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAD 431


>ref|XP_003556108.1| PREDICTED: tubulin beta-1 chain-like [Glycine max]
          Length = 448

 Score =  568 bits (1463), Expect = e-159
 Identities = 278/278 (100%), Positives = 278/278 (100%)
 Frame = +2

Query: 281  KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 460
            KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR
Sbjct: 154  KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213

Query: 461  TLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL 640
            TLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL
Sbjct: 214  TLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL 273

Query: 641  TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 820
            TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV
Sbjct: 274  TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 333

Query: 821  QNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA 1000
            QNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA
Sbjct: 334  QNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA 393

Query: 1001 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAD 1114
            FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAD
Sbjct: 394  FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAD 431


>ref|XP_003536467.1| PREDICTED: tubulin beta-1 chain-like [Glycine max]
          Length = 448

 Score =  568 bits (1463), Expect = e-159
 Identities = 278/278 (100%), Positives = 278/278 (100%)
 Frame = +2

Query: 281  KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 460
            KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR
Sbjct: 154  KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213

Query: 461  TLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL 640
            TLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL
Sbjct: 214  TLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPL 273

Query: 641  TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 820
            TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV
Sbjct: 274  TSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINV 333

Query: 821  QNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA 1000
            QNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA
Sbjct: 334  QNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKA 393

Query: 1001 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAD 1114
            FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAD
Sbjct: 394  FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAD 431


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