BLASTX nr result

ID: Coptis25_contig00009462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009462
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547420.1| PREDICTED: uncharacterized protein LOC100806...   287   7e-76
ref|XP_004146799.1| PREDICTED: uncharacterized protein LOC101220...   286   2e-75
ref|XP_003534870.1| PREDICTED: uncharacterized protein LOC100805...   285   2e-75
ref|XP_002510762.1| set domain protein, putative [Ricinus commun...   285   2e-75
gb|ADG57859.1| transcription factor [Lycoris longituba]               274   6e-72

>ref|XP_003547420.1| PREDICTED: uncharacterized protein LOC100806034 [Glycine max]
          Length = 1300

 Score =  287 bits (734), Expect = 7e-76
 Identities = 136/146 (93%), Positives = 143/146 (97%)
 Frame = -1

Query: 519  QLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYVGQLIRPRISDIREREYEKMGIGS 340
            QLKARKK LRFQRSKIHDWGLVALEPIEAEDFVIEY+G+LIRPRISDIRER+YEKMGIGS
Sbjct: 1155 QLKARKKHLRFQRSKIHDWGLVALEPIEAEDFVIEYIGELIRPRISDIRERQYEKMGIGS 1214

Query: 339  SYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRQIFAGEEIT 160
            SYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKR I AGEEIT
Sbjct: 1215 SYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEIT 1274

Query: 159  YNYKFPLEEEKIPCNCGSKRCRGSMN 82
            YNYKFPLEE+KIPCNCGS++CRGS+N
Sbjct: 1275 YNYKFPLEEKKIPCNCGSRKCRGSLN 1300


>ref|XP_004146799.1| PREDICTED: uncharacterized protein LOC101220062 [Cucumis sativus]
          Length = 1289

 Score =  286 bits (731), Expect = 2e-75
 Identities = 136/146 (93%), Positives = 143/146 (97%)
 Frame = -1

Query: 519  QLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYVGQLIRPRISDIREREYEKMGIGS 340
            QLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYVG+LIRPRISDIRER+YEKMGIGS
Sbjct: 1144 QLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYVGELIRPRISDIRERQYEKMGIGS 1203

Query: 339  SYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRQIFAGEEIT 160
            SYLFRLDDGYVVDATKRGG+ARFINHSCEPNCYTKVI+VEGQKKIFIYAKR I AGEEIT
Sbjct: 1204 SYLFRLDDGYVVDATKRGGVARFINHSCEPNCYTKVITVEGQKKIFIYAKRHISAGEEIT 1263

Query: 159  YNYKFPLEEEKIPCNCGSKRCRGSMN 82
            YNYKFPLEE+KIPCNC S+RCRGS+N
Sbjct: 1264 YNYKFPLEEKKIPCNCRSRRCRGSLN 1289


>ref|XP_003534870.1| PREDICTED: uncharacterized protein LOC100805708 [Glycine max]
          Length = 1213

 Score =  285 bits (730), Expect = 2e-75
 Identities = 134/146 (91%), Positives = 143/146 (97%)
 Frame = -1

Query: 519  QLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYVGQLIRPRISDIREREYEKMGIGS 340
            QLKARKK LRFQRSKIHDWGL+ALEPIEAEDFVIEY+G+LIRPRISDIRER+YEKMGIGS
Sbjct: 1068 QLKARKKHLRFQRSKIHDWGLLALEPIEAEDFVIEYIGELIRPRISDIRERQYEKMGIGS 1127

Query: 339  SYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRQIFAGEEIT 160
            SYLFRLDDGYVVDATKRGGIARF+NHSCEPNCYTKVISVEGQKKIFIYAKR I AGEEIT
Sbjct: 1128 SYLFRLDDGYVVDATKRGGIARFVNHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEIT 1187

Query: 159  YNYKFPLEEEKIPCNCGSKRCRGSMN 82
            YNYKFPLEE+KIPCNCGS++CRGS+N
Sbjct: 1188 YNYKFPLEEKKIPCNCGSRKCRGSLN 1213


>ref|XP_002510762.1| set domain protein, putative [Ricinus communis]
            gi|223551463|gb|EEF52949.1| set domain protein, putative
            [Ricinus communis]
          Length = 1258

 Score =  285 bits (730), Expect = 2e-75
 Identities = 136/146 (93%), Positives = 143/146 (97%)
 Frame = -1

Query: 519  QLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYVGQLIRPRISDIREREYEKMGIGS 340
            QLKARKKRLRFQ+SKIHDWGLVALEPIEAEDFVIEYVG+LIRPRISDIRER YEKMGIGS
Sbjct: 1113 QLKARKKRLRFQQSKIHDWGLVALEPIEAEDFVIEYVGELIRPRISDIRERLYEKMGIGS 1172

Query: 339  SYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRQIFAGEEIT 160
            SYLFRLDDGYVVDATKRGG+ARFINHSCEPNCYTKVISVEGQKKIFIYAKR I AGEEIT
Sbjct: 1173 SYLFRLDDGYVVDATKRGGVARFINHSCEPNCYTKVISVEGQKKIFIYAKRHIAAGEEIT 1232

Query: 159  YNYKFPLEEEKIPCNCGSKRCRGSMN 82
            YNYKFPLEE+KIPCNCGS++CRGS+N
Sbjct: 1233 YNYKFPLEEKKIPCNCGSRKCRGSLN 1258


>gb|ADG57859.1| transcription factor [Lycoris longituba]
          Length = 164

 Score =  274 bits (700), Expect = 6e-72
 Identities = 131/146 (89%), Positives = 139/146 (95%)
 Frame = -1

Query: 519 QLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYVGQLIRPRISDIREREYEKMGIGS 340
           QL ARKKRLRFQRS IHDWGLVALEPIE+EDFVIEYVG+L+R +ISDIRE +YEKMGIGS
Sbjct: 19  QLTARKKRLRFQRSNIHDWGLVALEPIESEDFVIEYVGELVRRQISDIRECQYEKMGIGS 78

Query: 339 SYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRQIFAGEEIT 160
           SYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVI+VEGQKKIFIYAKR I AGEE+T
Sbjct: 79  SYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVITVEGQKKIFIYAKRHIHAGEELT 138

Query: 159 YNYKFPLEEEKIPCNCGSKRCRGSMN 82
           YNYKFPLEE+KI CNCGSKRCRGSMN
Sbjct: 139 YNYKFPLEEQKILCNCGSKRCRGSMN 164


Top