BLASTX nr result

ID: Coptis25_contig00009438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009438
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323844.1| predicted protein [Populus trichocarpa] gi|2...   176   1e-42
ref|XP_002517488.1| conserved hypothetical protein [Ricinus comm...   172   3e-41
ref|XP_003589825.1| 3-dehydroquinate synthase [Medicago truncatu...   167   1e-39
ref|XP_003589806.1| 3-dehydroquinate synthase [Medicago truncatu...   167   1e-39
ref|XP_002282990.2| PREDICTED: 3-dehydroquinate synthase-like [V...   166   2e-39

>ref|XP_002323844.1| predicted protein [Populus trichocarpa] gi|222866846|gb|EEF03977.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  176 bits (447), Expect = 1e-42
 Identities = 89/123 (72%), Positives = 105/123 (85%)
 Frame = +3

Query: 6   ENRRVASFSEISSPEELNQFKPEDEEAKNIVIDLLDWQVIPAENIVAAFQDTQKTVFAIS 185
           EN+RVA+  E+S+P+EL Q +PE+ +A+N++I+LLDWQ+IPAENIVAAFQ +QKTV AIS
Sbjct: 59  ENKRVATIFEVSTPQELQQLQPENGQAENVIINLLDWQIIPAENIVAAFQGSQKTVLAIS 118

Query: 186 KTPSEAQIFFEALETGLGGVVLKVEDVDAVIDLKGYFDRRNEVGNLLSLNTATVTRVQVV 365
           KT SEAQIF EALE GLGGVVLKVEDV+AVI LK Y DRRNE  NLLSL  AT+TRVQV 
Sbjct: 119 KTHSEAQIFLEALEHGLGGVVLKVEDVEAVIKLKEYCDRRNEATNLLSLTKATITRVQVA 178

Query: 366 GMG 374
           GMG
Sbjct: 179 GMG 181


>ref|XP_002517488.1| conserved hypothetical protein [Ricinus communis]
           gi|223543499|gb|EEF45030.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 419

 Score =  172 bits (436), Expect = 3e-41
 Identities = 81/123 (65%), Positives = 106/123 (86%)
 Frame = +3

Query: 6   ENRRVASFSEISSPEELNQFKPEDEEAKNIVIDLLDWQVIPAENIVAAFQDTQKTVFAIS 185
           EN+RVA+  +IS+P+EL QF+ E+ +A+NIV++LLDWQ+IPAENIVAAFQ +QKTVFA+S
Sbjct: 125 ENKRVAATFDISTPQELEQFQLENAQAENIVVNLLDWQIIPAENIVAAFQGSQKTVFAVS 184

Query: 186 KTPSEAQIFFEALETGLGGVVLKVEDVDAVIDLKGYFDRRNEVGNLLSLNTATVTRVQVV 365
           KTPSEA++F EALE GLGG++L+VEDV+AV +LK YFDRRNE  N+L L  ATV+++Q  
Sbjct: 185 KTPSEAKVFLEALEHGLGGIILRVEDVEAVFELKNYFDRRNEASNVLILTKATVSKIQAA 244

Query: 366 GMG 374
           GMG
Sbjct: 245 GMG 247


>ref|XP_003589825.1| 3-dehydroquinate synthase [Medicago truncatula]
           gi|355478873|gb|AES60076.1| 3-dehydroquinate synthase
           [Medicago truncatula]
          Length = 392

 Score =  167 bits (422), Expect = 1e-39
 Identities = 79/124 (63%), Positives = 105/124 (84%)
 Frame = +3

Query: 3   SENRRVASFSEISSPEELNQFKPEDEEAKNIVIDLLDWQVIPAENIVAAFQDTQKTVFAI 182
           ++N++VA+  ++S+PEEL + +PEDE+A+NIV++LLDWQVIPAENI+AAFQ++QKTVFAI
Sbjct: 104 AQNKKVATIFDVSTPEELERLRPEDEQAENIVVNLLDWQVIPAENIIAAFQNSQKTVFAI 163

Query: 183 SKTPSEAQIFFEALETGLGGVVLKVEDVDAVIDLKGYFDRRNEVGNLLSLNTATVTRVQV 362
           S   SEAQ F EALE GL G+VLKVEDV+ +++LK YFDRR E  N+L+L  ATVT++QV
Sbjct: 164 SDNASEAQTFLEALEHGLDGIVLKVEDVEPMLELKEYFDRRTEESNVLNLTKATVTQIQV 223

Query: 363 VGMG 374
            GMG
Sbjct: 224 AGMG 227


>ref|XP_003589806.1| 3-dehydroquinate synthase [Medicago truncatula]
           gi|355478854|gb|AES60057.1| 3-dehydroquinate synthase
           [Medicago truncatula]
          Length = 330

 Score =  167 bits (422), Expect = 1e-39
 Identities = 79/124 (63%), Positives = 105/124 (84%)
 Frame = +3

Query: 3   SENRRVASFSEISSPEELNQFKPEDEEAKNIVIDLLDWQVIPAENIVAAFQDTQKTVFAI 182
           ++N++VA+  ++S+PEEL + +PEDE+A+NIV++LLDWQVIPAENI+AAFQ++QKTVFAI
Sbjct: 104 AQNKKVATIFDVSTPEELERLRPEDEQAENIVVNLLDWQVIPAENIIAAFQNSQKTVFAI 163

Query: 183 SKTPSEAQIFFEALETGLGGVVLKVEDVDAVIDLKGYFDRRNEVGNLLSLNTATVTRVQV 362
           S   SEAQ F EALE GL G+VLKVEDV+ +++LK YFDRR E  N+L+L  ATVT++QV
Sbjct: 164 SDNASEAQTFLEALEHGLDGIVLKVEDVEPMLELKEYFDRRTEESNVLNLTKATVTQIQV 223

Query: 363 VGMG 374
            GMG
Sbjct: 224 AGMG 227


>ref|XP_002282990.2| PREDICTED: 3-dehydroquinate synthase-like [Vitis vinifera]
          Length = 368

 Score =  166 bits (420), Expect = 2e-39
 Identities = 81/124 (65%), Positives = 102/124 (82%)
 Frame = +3

Query: 3   SENRRVASFSEISSPEELNQFKPEDEEAKNIVIDLLDWQVIPAENIVAAFQDTQKTVFAI 182
           SE R VA+  +++SP++L   +PED++A N++I+LLDWQVIPAENIVAAFQ +  TVFAI
Sbjct: 73  SEGRGVATVYDVTSPQQLQLLQPEDKQADNVIINLLDWQVIPAENIVAAFQGSHITVFAI 132

Query: 183 SKTPSEAQIFFEALETGLGGVVLKVEDVDAVIDLKGYFDRRNEVGNLLSLNTATVTRVQV 362
           SK+PSEAQIF EALE GLGGVVLKVED  AV++LK YFDRRNE  N+LSL  AT+T++ +
Sbjct: 133 SKSPSEAQIFLEALEQGLGGVVLKVEDATAVLELKDYFDRRNEDNNILSLTKATITQIHI 192

Query: 363 VGMG 374
            GMG
Sbjct: 193 SGMG 196


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