BLASTX nr result

ID: Coptis25_contig00009433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009433
         (1256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632718.1| PREDICTED: uncharacterized protein LOC100855...   209   2e-51
ref|XP_002325841.1| predicted protein [Populus trichocarpa] gi|2...   181   3e-43
ref|XP_002525420.1| conserved hypothetical protein [Ricinus comm...   174   6e-41
ref|XP_004147537.1| PREDICTED: uncharacterized protein LOC101222...   167   7e-39
ref|XP_002319159.1| predicted protein [Populus trichocarpa] gi|2...   167   7e-39

>ref|XP_003632718.1| PREDICTED: uncharacterized protein LOC100855285 [Vitis vinifera]
          Length = 290

 Score =  209 bits (531), Expect = 2e-51
 Identities = 139/303 (45%), Positives = 160/303 (52%), Gaps = 2/303 (0%)
 Frame = -2

Query: 1072 MDLDEWEYLSDDGFYALPNSGKGLLVSPKLDFNLGVKGVFDMDYFTYHSPKSRRKVEKTK 893
            MDL+EWEYL DDGF      G   +     D N   KGVFDM+YF   +PK    VE   
Sbjct: 1    MDLEEWEYLPDDGFLDFSEDGGRKIFIRDSDPNS--KGVFDMNYFICPTPKRETWVEPPP 58

Query: 892  NSSVSRDVKQLSPIQVHXXXXXXXXXXXXXXXXXXXXETSKLSPVNNSEKPNLTLGE-DQ 716
             S   R  KQL P+Q+                     +   L P          L E DQ
Sbjct: 59   LSP--RLPKQLLPLQIRLDPPPIVDEEVVKHITKIPLQIEALPPPVIRVPSLEALKEADQ 116

Query: 715  EMISQHVFFKKMKENEFVDIKMDSPKSGGRGIKAQTEAESFQFXXXXXXXXXXXDMGNKA 536
            + +SQ VFFKKMKENEFVD+KMDSPKSG RGI  Q EA  FQF           +   K 
Sbjct: 117  DTVSQ-VFFKKMKENEFVDMKMDSPKSGSRGILPQIEAGGFQFEEKDEKMENTHNPSKKN 175

Query: 535  STKVGTXXXXXXXXXXXXEVIKWEESRGGFNFLNWGLSGIGALCSLGMAAATICIFILGS 356
            +                     W ES G FN   W L+GIGALCS G+AA TICI I  S
Sbjct: 176  NLGPAPGPDIKEDEEG-----SWTESSGRFNVWKWSLTGIGALCSFGVAATTICIIIFAS 230

Query: 355  QQRHK-HQQNQKLRFQIYADDNKRFKQVVHHASKLNQAILSVRGVPFNRAHITSGGYYVY 179
             QR+K HQ NQ+LRFQI  DD KR K+VVHHA++LN+A  +VRGVP  RAHIT GGY  Y
Sbjct: 231  SQRNKHHQHNQRLRFQIITDD-KRIKRVVHHATQLNEAFSAVRGVPLTRAHITFGGY--Y 287

Query: 178  DGL 170
            DGL
Sbjct: 288  DGL 290


>ref|XP_002325841.1| predicted protein [Populus trichocarpa] gi|222862716|gb|EEF00223.1|
            predicted protein [Populus trichocarpa]
          Length = 299

 Score =  181 bits (459), Expect = 3e-43
 Identities = 125/309 (40%), Positives = 164/309 (53%), Gaps = 13/309 (4%)
 Frame = -2

Query: 1072 MDLDEWEYLSDDGFYALPNSG-KGLLVSPKLDFNLGVKGVFDMDYFTYHS--PKSRRKVE 902
            MDL+EWE L  DGF      G K    + K   +   K +FDM+YF   S  PK  R V 
Sbjct: 1    MDLEEWELLPHDGFIDYHEDGEKKTFGASKRSGSPNPKAMFDMNYFMCPSSPPKHSRVVP 60

Query: 901  KTKNSSVSRDVKQLSPIQVHXXXXXXXXXXXXXXXXXXXXETSKLSPVNNSEK-PNLTLG 725
                        QL P+ +                     +   + P++ S   P++T+ 
Sbjct: 61   N-----------QLVPVHIQLEPPTKTSKDVPEDHVISKKDVVSMVPIDLSAVVPSVTMP 109

Query: 724  E----DQEMISQHVFFKKMKENEFVDIKMDSPKSGG-RGIKAQTEAESFQFXXXXXXXXX 560
            E    DQ+ +SQ VFFKKMKENEFVD+K+DSPKS   +G  A  + ++            
Sbjct: 110  EVKEADQDSVSQ-VFFKKMKENEFVDMKLDSPKSSNTKGGFAPPQIDAGSTFNFEDKSDH 168

Query: 559  XXDMGNKA--STKVGTXXXXXXXXXXXXEV-IKWEESRGGFNFLNWGLSGIGALCSLGMA 389
                G++   +TK+ +            +  + WEE+  G N     L+GIGA+C+ G+A
Sbjct: 169  QGYTGDQVLETTKISSPRIKSTENENSTKKEVNWEENSSGLNLWKLSLTGIGAICTFGVA 228

Query: 388  AATICIFILGSQQRHK-HQQNQKLRFQIYADDNKRFKQVVHHASKLNQAILSVRGVPFNR 212
            AATICIFI G+QQR+K  QQNQKL FQIY DD KR KQVVHHA+KLN+AI + RGVP  R
Sbjct: 229  AATICIFIFGNQQRNKQQQQNQKLSFQIYTDD-KRIKQVVHHATKLNEAISAARGVPIAR 287

Query: 211  AHITSGGYY 185
            AHIT GGYY
Sbjct: 288  AHITYGGYY 296


>ref|XP_002525420.1| conserved hypothetical protein [Ricinus communis]
            gi|223535233|gb|EEF36910.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 293

 Score =  174 bits (440), Expect = 6e-41
 Identities = 127/308 (41%), Positives = 157/308 (50%), Gaps = 12/308 (3%)
 Frame = -2

Query: 1072 MDLDEWEYL-SDDGFYALPNSGKGLLVSPKLDFNLGVKGVFDMDYFTYHSPKSRRKVEKT 896
            MDLDEWE L    GF       +G     K   N   + +FDMDYF   S          
Sbjct: 1    MDLDEWEILPRSGGFLDYHEGDRG---GSKTSSN--TRTMFDMDYFVCPS-------SPP 48

Query: 895  KNSSVSRDVKQLSPIQVHXXXXXXXXXXXXXXXXXXXXETSKLSP----VNNSEKPNLTL 728
             NS++  + +QL P+                          K  P    +   + P+  L
Sbjct: 49   TNSTIVPN-QQLVPVPFQLEPTAVITGRDQEEGNRKKPIDIKAVPSLIILPEVKDPDKAL 107

Query: 727  GE-DQEMISQHVFFKKMKENEFVDIKMDSPKSGGRGI----KAQTEAESFQFXXXXXXXX 563
             E DQ+ ISQ VFFKKM EN+FVD+KMDSP+S  +G       Q +A  F F        
Sbjct: 108  KEADQDPISQ-VFFKKMTENKFVDMKMDSPESPTKGFVPPPLPQIDAGKFNFEDRSETFI 166

Query: 562  XXXDMGNKASTKVGTXXXXXXXXXXXXEVIKWEESRGGFNFLNWGLSGIGALCSLGMAAA 383
               ++  K S+                E   WE+S GG N   W L+GIGA+CS G+AAA
Sbjct: 167  KGENLEAKISS---PRIKNEKDINEEVEEGNWEDSSGGLNLWKWSLNGIGAICSFGVAAA 223

Query: 382  TICIFILGSQQRHK--HQQNQKLRFQIYADDNKRFKQVVHHASKLNQAILSVRGVPFNRA 209
            T+CI I GS QR+K   QQNQKLRFQIY DD KR KQVVHHA++LN+AI +VRGVP  RA
Sbjct: 224  TVCIIIFGSHQRNKQQQQQNQKLRFQIYTDD-KRIKQVVHHATRLNEAITAVRGVPIARA 282

Query: 208  HITSGGYY 185
            HIT GGYY
Sbjct: 283  HITYGGYY 290


>ref|XP_004147537.1| PREDICTED: uncharacterized protein LOC101222422 [Cucumis sativus]
            gi|449518988|ref|XP_004166517.1| PREDICTED:
            uncharacterized protein LOC101224266 [Cucumis sativus]
          Length = 290

 Score =  167 bits (422), Expect = 7e-39
 Identities = 122/315 (38%), Positives = 157/315 (49%), Gaps = 14/315 (4%)
 Frame = -2

Query: 1072 MDLDEWEYLSDDGFYALPNSGKGLLVSPKLDFNLGVKGVFDMDYFTYHSPKSRRKVEKTK 893
            MDL EWE LSDDG +   +  K + VS K       K VFDM+YF   S  S  K +   
Sbjct: 1    MDLHEWEILSDDGLHDYKDDQKKI-VSSKRRSGSDAKIVFDMNYFLCPSMDSSSK-QHIS 58

Query: 892  NSSVSRDVKQLSPIQVHXXXXXXXXXXXXXXXXXXXXETSK-------LSPVNNSEKPNL 734
              S SR VKQ  PI VH                    +  +       + P   SEK   
Sbjct: 59   QPSPSRLVKQ--PIPVHLQLDSPIIRIPDDDSLALKEKEKEKESIVIGVVPSAMSEKDQK 116

Query: 733  TLGE-DQEMISQHVFFKKMKENEFVDIKMDSPKSGGRGIKAQTEAESFQFXXXXXXXXXX 557
              GE DQ+ ++Q VFFKKMKENEFVD+K+DSP+S  +G K Q +   +QF          
Sbjct: 117  GAGEADQDTVTQ-VFFKKMKENEFVDMKIDSPRSSNKGTKPQIDVGHYQFDDGGESKENI 175

Query: 556  XD------MGNKASTKVGTXXXXXXXXXXXXEVIKWEESRGGFNFLNWGLSGIGALCSLG 395
             +      M  K++ ++                + W+ S GG N L W L+GIGA+CS G
Sbjct: 176  TNSPRMNLMSQKSNKEIDANKDE----------MNWDGSVGGLNILKWSLNGIGAICSFG 225

Query: 394  MAAATICIFILGSQQRHKHQQNQKLRFQIYADDNKRFKQVVHHASKLNQAILSVRGVPFN 215
            +AAATICI   G  Q        KLR QIY  D K+ KQ V  A++LN+AI + RG+P  
Sbjct: 226  VAAATICILFHGGNQ-------HKLRIQIYTHD-KKLKQAVQQATRLNEAISAARGLPQT 277

Query: 214  RAHITSGGYYVYDGL 170
            RAHIT GG+  YDG+
Sbjct: 278  RAHITCGGH--YDGI 290


>ref|XP_002319159.1| predicted protein [Populus trichocarpa] gi|222857535|gb|EEE95082.1|
            predicted protein [Populus trichocarpa]
          Length = 299

 Score =  167 bits (422), Expect = 7e-39
 Identities = 122/309 (39%), Positives = 155/309 (50%), Gaps = 13/309 (4%)
 Frame = -2

Query: 1072 MDLDEWEYLSDDGFYALPNSG-KGLLVSPKLDFNLGVKGVFDMDYFTYHS--PKSRRKVE 902
            MDL+EWE L  DGF      G K    + K       K + +M+YF   S  PK  R V 
Sbjct: 1    MDLEEWELLPHDGFIDYHEDGEKKTFGASKRSSPRRPKSMVNMNYFMCPSSPPKDSRLVP 60

Query: 901  KTKNSSVSRDVKQLSPIQVHXXXXXXXXXXXXXXXXXXXXETSKLSPVN-NSEKPNLTLG 725
                        QL P+ +                     E   + P++  +  P++ + 
Sbjct: 61   N-----------QLVPVPIQLEPTTTAGKDVPEGHVISKKEVISVVPIDLGAAVPSVIMP 109

Query: 724  E----DQEMISQHVFFKKMKENEFVDIKMDSPKSG---GRGIKAQTEA-ESFQFXXXXXX 569
            E    DQ+ +SQ VFFKKMKENEFVD+K+DSPKS    G  +  Q +A  +F F      
Sbjct: 110  EVKEADQDSVSQ-VFFKKMKENEFVDMKLDSPKSSSSKGGFVPPQIDAGPTFNFEDQSDH 168

Query: 568  XXXXXDMGNKASTKVGTXXXXXXXXXXXXEVIKWEESRGGFNFLNWGLSGIGALCSLGMA 389
                 D    A+                   ++WEE+ GG N     L+GIGA+CS G+A
Sbjct: 169  QGFKGDRELDATKISSPRIKSTGKESGTKGEVRWEENGGGLNLWKLSLTGIGAICSFGVA 228

Query: 388  AATICIFILGSQQRHK-HQQNQKLRFQIYADDNKRFKQVVHHASKLNQAILSVRGVPFNR 212
            AATICIFI GS QR+K  QQNQK  FQIY DD KR +QVVHHA+K+N AI   RGVP  R
Sbjct: 229  AATICIFIFGSHQRNKQQQQNQKPSFQIYTDD-KRIEQVVHHATKMNGAISVARGVPIAR 287

Query: 211  AHITSGGYY 185
            AHIT GGY+
Sbjct: 288  AHITYGGYH 296


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