BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009430
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...    86   3e-15
ref|XP_002523656.1| chromodomain helicase DNA binding protein, p...    81   8e-14
ref|XP_004134532.1| PREDICTED: uncharacterized protein LOC101204...    70   1e-10
ref|XP_002329920.1| chromatin remodeling complex subunit [Populu...    70   2e-10
ref|XP_002303505.1| chromatin remodeling complex subunit [Populu...    69   3e-10

>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 59/132 (44%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
 Frame = +2

Query: 2    LNLNMTTSQSLSSFVNHRKKPGIQMSPSPEVLQLVASFAGPGPHALLIPGMLSSSSLGNE 181
            LN+NM    S SSF+  +KK    +SPSPEVLQLVAS   PGPH   +PGM SS  L ++
Sbjct: 2211 LNINMMNPSSSSSFLKPQKK-STGLSPSPEVLQLVASCVAPGPHIPPVPGMPSSGFLDSK 2269

Query: 182  LHLPKPFGNGDERESRETKNVCKKDEVGQSSEVGGSDQLPVERFGKTESGD-SSKTHSDP 358
            L LPK    G   E  ++       +  Q+S +     L  ER  + ESGD SSKT SDP
Sbjct: 2270 LPLPKFIDRG---EFPDSTGASGNQKGKQTSTLSVHAPLNQERREQIESGDSSSKTQSDP 2326

Query: 359  RQNDKADVEEIS 394
               +  +VEEIS
Sbjct: 2327 SHAEHPNVEEIS 2338


>ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis] gi|223537108|gb|EEF38742.1| chromodomain
            helicase DNA binding protein, putative [Ricinus communis]
          Length = 2257

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 55/130 (42%), Positives = 75/130 (57%)
 Frame = +2

Query: 5    NLNMTTSQSLSSFVNHRKKPGIQMSPSPEVLQLVASFAGPGPHALLIPGMLSSSSLGNEL 184
            NL+M  S + SS+    KK  + +SPSPEVLQLVA+   PGPH     GM SSS L ++L
Sbjct: 2117 NLDMINSLT-SSYSKLPKKTSMGLSPSPEVLQLVAACVAPGPHLSSSSGMTSSSFLESKL 2175

Query: 185  HLPKPFGNGDERESRETKNVCKKDEVGQSSEVGGSDQLPVERFGKTESGDSSKTHSDPRQ 364
             LPK   + DE    + +   +KD+  Q         LP E+ G+ + GDSSK+ ++  Q
Sbjct: 2176 PLPK---SVDEVGVSDAQGAEEKDKDMQGLPPDTQIILPEEKPGQPDDGDSSKSGTNNSQ 2232

Query: 365  NDKADVEEIS 394
             +K DVEEIS
Sbjct: 2233 TEKPDVEEIS 2242


>ref|XP_004134532.1| PREDICTED: uncharacterized protein LOC101204186 [Cucumis sativus]
          Length = 2368

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 53/131 (40%), Positives = 67/131 (51%)
 Frame = +2

Query: 2    LNLNMTTSQSLSSFVNHRKKPGIQMSPSPEVLQLVASFAGPGPHALLIPGMLSSSSLGNE 181
            LNLNM    S  S   ++KK  + +SPSPEVLQLVAS   PG +   I G L+SS L   
Sbjct: 2229 LNLNMNPPSS--SLQTNQKKTNMGLSPSPEVLQLVASCVAPGSNLSSISGKLNSSILEKT 2286

Query: 182  LHLPKPFGNGDERESRETKNVCKKDEVGQSSEVGGSDQLPVERFGKTESGDSSKTHSDPR 361
            L L       D   S+ +    KK  +  SS     D    ++    ES DSSKT SDP 
Sbjct: 2287 LPLSTSHDPEDLLGSKGSPGKGKKQRLSFSS----LDFYNQDKPDSLESDDSSKTQSDPS 2342

Query: 362  QNDKADVEEIS 394
            ++ + D EEIS
Sbjct: 2343 RSKRPDGEEIS 2353


>ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222871157|gb|EEF08288.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2332

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 13/143 (9%)
 Frame = +2

Query: 5    NLNMTTSQSLSSFVNHRKKPGIQMSPSPEVLQLVASFAGPGPHALLIPGMLSSSSLGNEL 184
            +L+   S + S+++N +KK  + +SPSPEVLQLVAS   PGPH     G  S+S   +++
Sbjct: 2192 SLHKMNSLTSSAYLNIQKKTTMGLSPSPEVLQLVASCVAPGPHLSSGSGATSASLHESKV 2251

Query: 185  HLPKPFGNGDERESRETKNVCKKDEVGQSSEVGGSDQ-------------LPVERFGKTE 325
             LPK                   D+VG S  +G  ++             +P +R  + +
Sbjct: 2252 PLPK-----------------SPDQVGISDPLGALEEPMDTERSPPQVQCIPEKRLDQPD 2294

Query: 326  SGDSSKTHSDPRQNDKADVEEIS 394
            SGDSSKT SD     + DVE+IS
Sbjct: 2295 SGDSSKTESDLSPIKQPDVEDIS 2317


>ref|XP_002303505.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222840937|gb|EEE78484.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2327

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
 Frame = +2

Query: 5    NLNMTTSQSLSSFVNHRKKPGIQMSPSPEVLQLVASFAGPGPHALLIPGMLSSSSLGNEL 184
            +L+   S + S+++N +KK  + +SPSPEVLQLVAS   PGPH     G  SSS   +++
Sbjct: 2190 SLSKMNSLTSSAYLNVQKKTTMGLSPSPEVLQLVASCVAPGPHLTSGSGTTSSSIHESKV 2249

Query: 185  HL---PKPFGNGDERESRETKNVCKKDEVGQSSEVGGSDQLPVERFGKTESGDSSKTHSD 355
             +   P   G  D + + +T+ +  + +            LP +R  + +SGDSSKT SD
Sbjct: 2250 PMRKSPDQVGMSDSQVALDTERLPPQVQ----------SMLPEKRPDQPDSGDSSKTESD 2299

Query: 356  PRQNDKADVEEIS 394
                 K DVE+IS
Sbjct: 2300 FSPIKKPDVEDIS 2312