BLASTX nr result
ID: Coptis25_contig00009420
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00009420
(4276 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270102.1| PREDICTED: uncharacterized protein LOC100266... 695 0.0
emb|CBI34075.3| unnamed protein product [Vitis vinifera] 691 0.0
ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232... 548 e-153
ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu... 526 e-146
gb|AEV43360.1| RNA recognition motif protein 1 [Citrus sinensis] 519 e-144
>ref|XP_002270102.1| PREDICTED: uncharacterized protein LOC100266805 [Vitis vinifera]
Length = 719
Score = 695 bits (1793), Expect = 0.0
Identities = 350/599 (58%), Positives = 434/599 (72%), Gaps = 6/599 (1%)
Frame = -2
Query: 3525 HHDVMKERRKRKEFEIFVGGLDRDANEEDMRKVFSQVGEVTEVRLMKNPMTQKNKGFGFV 3346
HHD++KERRKRKEFE+FVGGLDRD E+D+ F QVG++TEVRLMKN +TQKNKGF F+
Sbjct: 112 HHDLVKERRKRKEFEVFVGGLDRDVTEDDLFHFFRQVGDITEVRLMKNALTQKNKGFAFI 171
Query: 3345 RFATVEQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKAVFREKLVHHGVD 3166
RFATVEQARRA+NELKHP +NGKQCGV+PSQDSDTLFVGNICKTWTK ++KL ++GVD
Sbjct: 172 RFATVEQARRAVNELKHPVINGKQCGVAPSQDSDTLFVGNICKTWTKVAVKDKLAYYGVD 231
Query: 3165 KFEEVTLVEDAKNEGLNRGFAFLDFSCRADALEACKRLQKMDVVFGTDRSAKVAFADTFI 2986
K+E++TLVED KNEG+NRGFAFLDFS RADALEACKRLQK DVVFGTDR+A+VAFADTFI
Sbjct: 232 KYEDLTLVEDTKNEGMNRGFAFLDFSSRADALEACKRLQKRDVVFGTDRTARVAFADTFI 291
Query: 2985 EPDDEIMAQVRTVFLDGLPASWDEDRASEHVKKFGKVEKVELARNMPAAKRTDFGFITFD 2806
EPDDEIM+QVRT+FLDGLPA+WDEDR +++KKFG++EK+ELARNMPAAKRTDFGF+TFD
Sbjct: 292 EPDDEIMSQVRTIFLDGLPATWDEDRVRDYLKKFGRIEKIELARNMPAAKRTDFGFVTFD 351
Query: 2805 THDAAVACVDGVNNTELGDGVKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXRTS 2626
THD+AVACVD +NN+EL DG + VKVRARLSRPRQRGKS++HA +
Sbjct: 352 THDSAVACVDSINNSELVDGERLVKVRARLSRPRQRGKSAKHARGGYLVAQGSGRGFKAP 411
Query: 2625 WDSS----DSWGYAGRSGRDMQSHRTYSGGFKRPLGSRERYPITDMAPSRIDSRRRLPSS 2458
W SS DSW + GR GR MQ+ Y GG KRP+G R+R+ + +M P+R+ SRRR PS
Sbjct: 412 WGSSSSRMDSWKFTGRGGRSMQTRGAYDGGLKRPVGPRDRHSMMEMVPTRVGSRRRFPSP 471
Query: 2457 ERSYDRRSPGLAFGRSSSRREYVRTDEHYPRSSDFVDGVRPSNYVSKTRSSDFVDGVRPS 2278
E S+ RRSP + +SS++REY++ DE + R + F
Sbjct: 472 ESSFGRRSP--VYEKSSTKREYIQRDESFSRPAVF------------------------- 504
Query: 2277 NYVSKTRSSDFVTKGANEKRWSYRDAYPSRESEYLDSPQXXXXXXXXXXXXXXXAEESYG 2098
+ E+R+ Y+D Y SR SEYLDSP ++ Y
Sbjct: 505 ------------ARDPTERRY-YKDNYSSRGSEYLDSP-PRNVSRAAGHRAPLYEDDDYD 550
Query: 2097 RHMERPSSYRGSQSHDYGSVSGSKRSHASMEEYQSRFPESTVRQSRARFDYGVSNDDMPY 1918
R++ERP++Y HDYGS+S SKRSH++MEE SR+ E +R SRARFDYG SN +PY
Sbjct: 551 RYLERPTNYHDGHRHDYGSISSSKRSHSAMEEVHSRYAEPPIRHSRARFDYGGSNSGLPY 610
Query: 1917 NDRAYGSESTS-ARVGRGTHLGYERGSRSSAGHSQGVYDTHTS-SAYSRDEGRRADMGG 1747
+D YGSESTS R+GRG+ LGY+ G RSS+GHS+G+Y+T TS + Y RD+ R + G
Sbjct: 611 DDH-YGSESTSERRMGRGSRLGYDGGMRSSSGHSRGMYETRTSTTGYRRDDISRGNEEG 668
>emb|CBI34075.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 691 bits (1783), Expect = 0.0
Identities = 345/584 (59%), Positives = 427/584 (73%), Gaps = 5/584 (0%)
Frame = -2
Query: 3525 HHDVMKERRKRKEFEIFVGGLDRDANEEDMRKVFSQVGEVTEVRLMKNPMTQKNKGFGFV 3346
HHD++KERRKRKEFE+FVGGLDRD E+D+ F QVG++TEVRLMKN +TQKNKGF F+
Sbjct: 173 HHDLVKERRKRKEFEVFVGGLDRDVTEDDLFHFFRQVGDITEVRLMKNALTQKNKGFAFI 232
Query: 3345 RFATVEQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKAVFREKLVHHGVD 3166
RFATVEQARRA+NELKHP +NGKQCGV+PSQDSDTLFVGNICKTWTK ++KL ++GVD
Sbjct: 233 RFATVEQARRAVNELKHPVINGKQCGVAPSQDSDTLFVGNICKTWTKVAVKDKLAYYGVD 292
Query: 3165 KFEEVTLVEDAKNEGLNRGFAFLDFSCRADALEACKRLQKMDVVFGTDRSAKVAFADTFI 2986
K+E++TLVED KNEG+NRGFAFLDFS RADALEACKRLQK DVVFGTDR+A+VAFADTFI
Sbjct: 293 KYEDLTLVEDTKNEGMNRGFAFLDFSSRADALEACKRLQKRDVVFGTDRTARVAFADTFI 352
Query: 2985 EPDDEIMAQVRTVFLDGLPASWDEDRASEHVKKFGKVEKVELARNMPAAKRTDFGFITFD 2806
EPDDEIM+QVRT+FLDGLPA+WDEDR +++KKFG++EK+ELARNMPAAKRTDFGF+TFD
Sbjct: 353 EPDDEIMSQVRTIFLDGLPATWDEDRVRDYLKKFGRIEKIELARNMPAAKRTDFGFVTFD 412
Query: 2805 THDAAVACVDGVNNTELGDGVKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXRTS 2626
THD+AVACVD +NN+EL DG + VKVRARLSRPRQRGKS++HA +
Sbjct: 413 THDSAVACVDSINNSELVDGERLVKVRARLSRPRQRGKSAKHARGGYLVAQGSGRGFKAP 472
Query: 2625 WDSS----DSWGYAGRSGRDMQSHRTYSGGFKRPLGSRERYPITDMAPSRIDSRRRLPSS 2458
W SS DSW + GR GR MQ+ Y GG KRP+G R+R+ + +M P+R+ SRRR PS
Sbjct: 473 WGSSSSRMDSWKFTGRGGRSMQTRGAYDGGLKRPVGPRDRHSMMEMVPTRVGSRRRFPSP 532
Query: 2457 ERSYDRRSPGLAFGRSSSRREYVRTDEHYPRSSDFVDGVRPSNYVSKTRSSDFVDGVRPS 2278
E S+ RRSP + +SS++REY++ DE + R + F
Sbjct: 533 ESSFGRRSP--VYEKSSTKREYIQRDESFSRPAVF------------------------- 565
Query: 2277 NYVSKTRSSDFVTKGANEKRWSYRDAYPSRESEYLDSPQXXXXXXXXXXXXXXXAEESYG 2098
+ E+R+ Y+D Y SR SEYLDSP ++ Y
Sbjct: 566 ------------ARDPTERRY-YKDNYSSRGSEYLDSP-PRNVSRAAGHRAPLYEDDDYD 611
Query: 2097 RHMERPSSYRGSQSHDYGSVSGSKRSHASMEEYQSRFPESTVRQSRARFDYGVSNDDMPY 1918
R++ERP++Y HDYGS+S SKRSH++MEE SR+ E +R SRARFDYG SN +PY
Sbjct: 612 RYLERPTNYHDGHRHDYGSISSSKRSHSAMEEVHSRYAEPPIRHSRARFDYGGSNSGLPY 671
Query: 1917 NDRAYGSESTS-ARVGRGTHLGYERGSRSSAGHSQGVYDTHTSS 1789
+D YGSESTS R+GRG+ LGY+ G RSS+GHS+G+Y+T TS+
Sbjct: 672 DDH-YGSESTSERRMGRGSRLGYDGGMRSSSGHSRGMYETRTST 714
>ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
gi|297734640|emb|CBI16691.3| unnamed protein product
[Vitis vinifera]
Length = 812
Score = 548 bits (1411), Expect = e-153
Identities = 305/598 (51%), Positives = 388/598 (64%), Gaps = 5/598 (0%)
Frame = -2
Query: 3525 HHDVMKERRKRKEFEIFVGGLDRDANEEDMRKVFSQVGEVTEVRLMKNPMTQKNKGFGFV 3346
HH+V KERRKRKEFE+FVGGLD+DA E+D+RKVFSQVGEVTEVRLM NP T+KNKGF F+
Sbjct: 219 HHEVFKERRKRKEFEVFVGGLDKDATEDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFL 278
Query: 3345 RFATVEQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKAVFREKLVHHGVD 3166
RFATVEQA+RA+ ELK+P VNGKQCGV+PSQDSDTLF+GNICKTWTK +EKL H+GV+
Sbjct: 279 RFATVEQAKRAVTELKNPVVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVE 338
Query: 3165 KFEEVTLVEDAKNEGLNRGFAFLDFSCRADALEACKRLQKMDVVFGTDRSAKVAFADTFI 2986
E++TLVED+ NEG+NRGFAFL+FS R+DA++A KRLQK DVVFG DR+AKV+FAD+FI
Sbjct: 339 NVEDLTLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRTAKVSFADSFI 398
Query: 2985 EPDDEIMAQVRTVFLDGLPASWDEDRASEHVKKFGKVEKVELARNMPAAKRTDFGFITFD 2806
+P DEIMAQV+TVF+DGLPASWDEDR E +KK+G++EK+ELARNMP+AKR DFGF+TFD
Sbjct: 399 DPGDEIMAQVKTVFIDGLPASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFD 458
Query: 2805 THDAAVACVDGVNNTELGDGVKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXRT- 2629
THDAAV C +NN ELG+G K KVRARLSRP QRGK +
Sbjct: 459 THDAAVTCAKSINNAELGEGENKAKVRARLSRPLQRGKGKHISRGDFRPGRGGPVRGVRG 518
Query: 2628 SWDSSDSWGYAGRSGRDMQSHRTYSGGFKRPLGSRERYPITDMAPSRIDSRRRLPSSERS 2449
SW + GR R + R KRP+G R+R P+ M P R LP RS
Sbjct: 519 SWARPALRSFPGRGARGL-GPRLPPAAVKRPIGFRDRRPVMAMPP----RGRPLPPPSRS 573
Query: 2448 YDRRSPGLAFGRSSSRREYVRTDEHYPRSSDFVDGVRPSNYVSKTRSSDFVDGVRPSNYV 2269
YDRR+P A+ + + +R+Y R +E RS RP
Sbjct: 574 YDRRAPVPAYPKPNLKRDYGRREEVPLRS-------RP---------------------- 604
Query: 2268 SKTRSSDFVTKGANEKRWSYRDAYPSRESEYLDSPQXXXXXXXXXXXXXXXAEESYGRHM 2089
+ D+ ++ A E+R SYRD Y +R S Y D P+ +++YG+
Sbjct: 605 ----AVDYGSRVAPERRPSYRDDYATRGSGYSDIPR----NTSRTAARRTYEDDAYGQRF 656
Query: 2088 ER--PSSYRGSQSHDYGSVSGSKRSHASMEEYQSRFPESTVRQSRARFDYGVSNDDMPYN 1915
ER P SYR + DY S++GSKR + ++++ R+ +++VRQSRAR DY +S Y
Sbjct: 657 ERPPPPSYREGRPRDYDSIAGSKRPYGALDDVPPRYADASVRQSRARLDYEMSAGASQYG 716
Query: 1914 DRAYGSESTSARVGRGTHLGYERGSRS--SAGHSQGVYDTHTSSAYSRDEGRRADMGG 1747
D AYG R+GR ++LGY GSRS S+ S G+Y + Y +D+GG
Sbjct: 717 D-AYGD-----RLGR-SNLGY-GGSRSSMSSQDSHGLYSSRQGMGYGGGSFGGSDVGG 766
>ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis]
gi|223534154|gb|EEF35870.1| RNA binding protein, putative
[Ricinus communis]
Length = 784
Score = 526 bits (1356), Expect = e-146
Identities = 300/605 (49%), Positives = 383/605 (63%), Gaps = 12/605 (1%)
Frame = -2
Query: 3525 HHDVMKERRKRKEFEIFVGGLDRDANEEDMRKVFSQVGEVTEVRLMKNPMTQKNKGFGFV 3346
HH+V KERRKRKEFE+FVGGLD+DA E+D+RKVF++VGEVTEVRLM NP T+KNKGF F+
Sbjct: 200 HHEVFKERRKRKEFEVFVGGLDKDATEDDLRKVFTRVGEVTEVRLMMNPQTKKNKGFAFL 259
Query: 3345 RFATVEQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKAVFREKLVHHGVD 3166
RF+TVEQA++A+ ELK+P +NGKQCGV+PSQDSDTLF+GNICKTWTK +EKL H+GV+
Sbjct: 260 RFSTVEQAKKAVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVE 319
Query: 3165 KFEEVTLVEDAKNEGLNRGFAFLDFSCRADALEACKRLQKMDVVFGTDRSAKVAFADTFI 2986
E+VTLVED+ NEG+NRGFAFL+FS R+DA++A KRLQK DV+FG DR AKV+FAD+FI
Sbjct: 320 NVEDVTLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFI 379
Query: 2985 EPDDEIMAQVRTVFLDGLPASWDEDRASEHVKKFGKVEKVELARNMPAAKRTDFGFITFD 2806
+P DEIMAQV+TVF+DGLPASWDEDR E +KKFG++EK+ELARNMP+AKR DFGF+TFD
Sbjct: 380 DPGDEIMAQVKTVFVDGLPASWDEDRVRELLKKFGEIEKIELARNMPSAKRKDFGFVTFD 439
Query: 2805 THDAAVACVDGVNNTELGDGVKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXRTS 2626
+HDAAV C +NN ELG+G K KVRARLSRP QRGK +HA S
Sbjct: 440 SHDAAVTCAKSINNAELGEGDNKAKVRARLSRPLQRGK-GKHA----------------S 482
Query: 2625 WDSSDSWGYAGRSGRDMQ-------SHRTYSGGFKRPLGSRERYPITDMAPSRIDSRRRL 2467
SW Y GR+ R + R KR +G R+R P P R R L
Sbjct: 483 RADFRSW-YGGRTARGPWVRPVRGIASRAAPTSVKRHVGLRDRRPPVMSMPVR---GRPL 538
Query: 2466 PSSERSYDRRSPGLAFGRSSSRREYVRTDEHYPRSSDFVDGVRPSNYVSKTRSSDFVDGV 2287
P R+YDRR+P ++ +SS +R+Y R +E P S
Sbjct: 539 PPPNRTYDRRAPAPSYPKSSLKRDYGRREELPPPRS------------------------ 574
Query: 2286 RPSNYVSKTRSSDFVTKGANEKRWSYRDAYPSRESEYLDSPQXXXXXXXXXXXXXXXAEE 2107
D+ ++ E+R SYRD Y SR S Y D P+ ++
Sbjct: 575 --------RAPVDYSSRSVAERRQSYRDDYSSRGSGYSDIPR----GTSRSSARRAYVDD 622
Query: 2106 SYGRHMER-PSSYRGSQSHDYGSVSGSKRSHASMEEYQSRFPE--STVRQSRARFDYGVS 1936
YG+ +ER P SYR ++ DY S+SGSKR +++M++ R+ + + R SRAR DY +
Sbjct: 623 GYGQRLERHPPSYREGRARDYDSISGSKRPYSAMDDVPPRYADGGAGTRHSRARLDYELG 682
Query: 1935 NDDMPYNDRAYGSESTSARVGRGTHLGYERGSRS--SAGHSQGVYDTHTSSAYSRDEGRR 1762
Y D AYG R+GR + +GY GSRS S+ S G+Y + Y G
Sbjct: 683 PSASQYGD-AYGD-----RIGRSS-VGY-GGSRSSLSSQDSHGLYTSRQGMGYGGSYGAN 734
Query: 1761 ADMGG 1747
D+GG
Sbjct: 735 -DVGG 738
>gb|AEV43360.1| RNA recognition motif protein 1 [Citrus sinensis]
Length = 775
Score = 519 bits (1337), Expect = e-144
Identities = 298/596 (50%), Positives = 372/596 (62%), Gaps = 3/596 (0%)
Frame = -2
Query: 3525 HHDVMKERRKRKEFEIFVGGLDRDANEEDMRKVFSQVGEVTEVRLMKNPMTQKNKGFGFV 3346
HH++ +ERRKRKEFE+FVGGLD+D +D+RKVFSQVGEVTEVRLM NP T+KNKGF F+
Sbjct: 184 HHEMFQERRKRKEFEVFVGGLDKDVVGDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFL 243
Query: 3345 RFATVEQARRAINELKHPTVNGKQCGVSPSQDSDTLFVGNICKTWTKAVFREKLVHHGVD 3166
RFATVEQAR+A+ ELK+P +NGKQCGV+PSQDSDTLF+GNICKTWTK +EKL H+GVD
Sbjct: 244 RFATVEQARQAVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVD 303
Query: 3165 KFEEVTLVEDAKNEGLNRGFAFLDFSCRADALEACKRLQKMDVVFGTDRSAKVAFADTFI 2986
E++TLVED+ NEG+NRGFAFL+FS R+DA++A KRLQK DV+FG DR AKV+FAD+FI
Sbjct: 304 NVEDLTLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFI 363
Query: 2985 EPDDEIMAQVRTVFLDGLPASWDEDRASEHVKKFGKVEKVELARNMPAAKRTDFGFITFD 2806
+P DEIMAQV+TVF+DGLPASWDEDR E +K +G++ K+ELARNMP+AKR DFGF+TFD
Sbjct: 364 DPGDEIMAQVKTVFVDGLPASWDEDRVRELLKNYGEITKIELARNMPSAKRKDFGFVTFD 423
Query: 2805 THDAAVACVDGVNNTELGDGVKKVKVRARLSRPRQRGKSSRHAXXXXXXXXXXXXXXRTS 2626
THDAAV C +NN ELG+G K KVRARLSRP QRGK + R S
Sbjct: 424 THDAAVTCAKSINNAELGEGDNKAKVRARLSRPLQRGKGKHASRGDFRSGRGTGRATRGS 483
Query: 2625 WDSSDSWGYAGRSGRDMQSHRTYSGGFKRPLGSRERYPITDMAPSRIDSRRRLPSSERSY 2446
W GRS R + S R KRP+ R+R PI M +R P RSY
Sbjct: 484 WGLPSPRSLPGRSARGIGS-RLPPASVKRPVPVRDRRPIMSMTAR---ARPMPPPPPRSY 539
Query: 2445 DRRSPGLAFGRSSSRREYVRTDEHYPRSSDFVDGVRPSNYVSKTRSSDFVDGVRPSNYVS 2266
DRR+P ++ + +REY R DE P S P +Y S+ V RP
Sbjct: 540 DRRAPVPSYPKPGLKREYGRRDEVPPPRSR-----APVDYGSRV-----VPDRRP----- 584
Query: 2265 KTRSSDFVTKGANEKRWSYRDAYPSRESEYLDSPQXXXXXXXXXXXXXXXAEESYGRHME 2086
YRD Y SR S Y D P+ ++ Y + E
Sbjct: 585 ------------------YRDEYTSRGSGYPDMPR----STSRGAARRPYVDDGYAQRFE 622
Query: 2085 R-PSSYRGSQSHDYGSVSGSKRSHASMEEYQSRFPESTVRQSRARFDYGVSNDDMPYNDR 1909
R P SYR ++ DY +VSGSKR ++ +++ R+ + VR SRAR DY + Y D
Sbjct: 623 RPPPSYREGRARDYETVSGSKRPYSVVDDVPPRYADPGVRHSRARLDYDLGGGAPQYGD- 681
Query: 1908 AYGSESTSARVGRGTHLGYERGSRS--SAGHSQGVYDTHTSSAYSRDEGRRADMGG 1747
AYG R+GR ++LGY GSRS S+ S G+Y + Y D+GG
Sbjct: 682 AYGD-----RMGR-SNLGY-GGSRSSISSQDSHGLYSSRQGMGYGGSYS-GGDVGG 729