BLASTX nr result

ID: Coptis25_contig00009415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009415
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20761.3| unnamed protein product [Vitis vinifera]               97   2e-18
ref|XP_002280551.1| PREDICTED: uncharacterized protein LOC100245...    97   2e-18
ref|XP_002515338.1| ring finger protein, putative [Ricinus commu...    97   2e-18
gb|AFK36630.1| unknown [Lotus japonicus]                               93   2e-17
ref|XP_002330765.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17

>emb|CBI20761.3| unnamed protein product [Vitis vinifera]
          Length = 403

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 37/51 (72%), Positives = 44/51 (86%)
 Frame = -3

Query: 244 GDDAKCSVCQEEYAEGDEMGNLRCDHHYHLVCINQWLRLKNWCPICKAQAA 92
           GDD KCS+CQEEY  GDE+G L+C+H YH+ CI+QWLRLKNWCP+CKA AA
Sbjct: 352 GDDVKCSICQEEYMVGDEVGKLQCEHGYHVACIHQWLRLKNWCPVCKASAA 402


>ref|XP_002280551.1| PREDICTED: uncharacterized protein LOC100245643 [Vitis vinifera]
          Length = 550

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 37/51 (72%), Positives = 44/51 (86%)
 Frame = -3

Query: 244 GDDAKCSVCQEEYAEGDEMGNLRCDHHYHLVCINQWLRLKNWCPICKAQAA 92
           GDD KCS+CQEEY  GDE+G L+C+H YH+ CI+QWLRLKNWCP+CKA AA
Sbjct: 499 GDDVKCSICQEEYMVGDEVGKLQCEHGYHVACIHQWLRLKNWCPVCKASAA 549


>ref|XP_002515338.1| ring finger protein, putative [Ricinus communis]
           gi|223545282|gb|EEF46787.1| ring finger protein,
           putative [Ricinus communis]
          Length = 554

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 37/50 (74%), Positives = 42/50 (84%)
 Frame = -3

Query: 241 DDAKCSVCQEEYAEGDEMGNLRCDHHYHLVCINQWLRLKNWCPICKAQAA 92
           DD KCS+CQEEY  GDEMG L+C+H YH+ C+ QWLRLKNWCPICKA AA
Sbjct: 493 DDVKCSICQEEYTVGDEMGRLQCEHRYHVACVQQWLRLKNWCPICKASAA 542


>gb|AFK36630.1| unknown [Lotus japonicus]
          Length = 184

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 36/50 (72%), Positives = 42/50 (84%)
 Frame = -3

Query: 241 DDAKCSVCQEEYAEGDEMGNLRCDHHYHLVCINQWLRLKNWCPICKAQAA 92
           DD KCS+CQEEY   DE+G+L+C+H YH+VCI QWLRLKNWCPICKA  A
Sbjct: 126 DDIKCSICQEEYVAADEVGSLKCEHKYHVVCIQQWLRLKNWCPICKAPVA 175


>ref|XP_002330765.1| predicted protein [Populus trichocarpa] gi|222872567|gb|EEF09698.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 35/50 (70%), Positives = 42/50 (84%)
 Frame = -3

Query: 241 DDAKCSVCQEEYAEGDEMGNLRCDHHYHLVCINQWLRLKNWCPICKAQAA 92
           DD +CS+CQEEYA+GDE+G L C+H YH+ CI+QWL LKNWCPICK  AA
Sbjct: 444 DDIRCSICQEEYADGDEVGRLPCEHRYHVACIHQWLSLKNWCPICKTSAA 493


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