BLASTX nr result

ID: Coptis25_contig00009402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009402
         (2041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307851.1| predicted protein [Populus trichocarpa] gi|2...   290   1e-75
ref|XP_002322499.1| predicted protein [Populus trichocarpa] gi|2...   284   7e-74
ref|XP_002533399.1| RNA (guanine-9-) methyltransferase domain co...   283   9e-74
ref|XP_004139517.1| PREDICTED: tRNA (guanine(9)-N1)-methyltransf...   281   4e-73
emb|CAN75735.1| hypothetical protein VITISV_030149 [Vitis vinifera]   281   5e-73

>ref|XP_002307851.1| predicted protein [Populus trichocarpa] gi|222853827|gb|EEE91374.1|
            predicted protein [Populus trichocarpa]
          Length = 328

 Score =  290 bits (741), Expect = 1e-75
 Identities = 173/343 (50%), Positives = 199/343 (58%), Gaps = 9/343 (2%)
 Frame = -3

Query: 1931 EQMVELMENDETTLERSNNDTSSPTPLSKNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1752
            E+  E  +ND+ TLE   N  S PTPLSKNA                             
Sbjct: 2    EEEKESEQNDQNTLESQPN--SQPTPLSKNAQKKLLKQQKWEAKKAEKKAQVKEQKMKEA 59

Query: 1751 XXXXXEWDEKLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVD-GQKIV 1575
                 EW+E+LS                                         + GQ IV
Sbjct: 60   ERKRKEWEERLSSCASEEERLKLIESRRELRKERMEKRAEEKEDKVQRLSKAKEFGQNIV 119

Query: 1574 VDLEFTDLMTGNEINSLVHQXXXXXXXXXXXXXXXXXXXXXXXXXVNGRCDSPAHLWLTG 1395
            +DLEF DLMT +EI+SLV Q                         VN RC SP HLWLTG
Sbjct: 120  IDLEFADLMTNSEIHSLVQQIMYCYA-------------------VNRRCTSPGHLWLTG 160

Query: 1394 CRGEIQTQLRRLPGFDKWFIEKESRSYIDALEQQKENLVYLTADAETVLDELDPKKIYII 1215
            CRGE++ QL+RLPGFDKW IEKES+SYIDAL+ QKENLVYLTAD+ETVLDELD KKIYII
Sbjct: 161  CRGEMENQLQRLPGFDKWIIEKESQSYIDALQDQKENLVYLTADSETVLDELDLKKIYII 220

Query: 1214 GGLVDRNRWKGITMNKAKDQGISTAKLPIGSFLKMSSSQVLTVNQVVEILLRFLETRDWK 1035
            GGLVDRNRWKGITM KA +QGI TAKLPIGS+LKMSSSQVLTVNQVVEILL+F+E +DWK
Sbjct: 221  GGLVDRNRWKGITMKKASEQGIQTAKLPIGSYLKMSSSQVLTVNQVVEILLKFVEIKDWK 280

Query: 1034 TSFFQVIPQRKRCEAE------VDVQDTEDVD--IEPKKKCTE 930
             SFFQVIPQRKR E +      VD ++ E+ D   + KK+C E
Sbjct: 281  ASFFQVIPQRKRGETDSEELQGVDGEELENEDDPSDKKKRCIE 323


>ref|XP_002322499.1| predicted protein [Populus trichocarpa] gi|222867129|gb|EEF04260.1|
            predicted protein [Populus trichocarpa]
          Length = 266

 Score =  284 bits (726), Expect = 7e-74
 Identities = 149/222 (67%), Positives = 168/222 (75%)
 Frame = -3

Query: 1589 GQKIVVDLEFTDLMTGNEINSLVHQXXXXXXXXXXXXXXXXXXXXXXXXXVNGRCDSPAH 1410
            GQ IV+DLEF DLMT  EI+SLV Q                         VNGRC SP H
Sbjct: 65   GQNIVIDLEFADLMTNIEIHSLVQQIIYCYA-------------------VNGRCASPGH 105

Query: 1409 LWLTGCRGEIQTQLRRLPGFDKWFIEKESRSYIDALEQQKENLVYLTADAETVLDELDPK 1230
            LWLTGCRGE++ QL+RLPGFDKW IEKES+SYI+AL+ QKENLVYLTAD+ETVLDELD K
Sbjct: 106  LWLTGCRGEMENQLQRLPGFDKWSIEKESQSYIEALQDQKENLVYLTADSETVLDELDLK 165

Query: 1229 KIYIIGGLVDRNRWKGITMNKAKDQGISTAKLPIGSFLKMSSSQVLTVNQVVEILLRFLE 1050
            KIYI+GGLVDRNRWKG+TM KA +QGI TAKLPI S+LKMSSSQVLTVNQVVEILL+F+E
Sbjct: 166  KIYIVGGLVDRNRWKGLTMKKANEQGIQTAKLPISSYLKMSSSQVLTVNQVVEILLKFVE 225

Query: 1049 TRDWKTSFFQVIPQRKRCEAEVDVQDTEDVDIEPKKKCTERS 924
            T+DWKTSFFQVIPQRKR   E D ++ E VD E  +   E S
Sbjct: 226  TKDWKTSFFQVIPQRKR--GETDPEELERVDREELEDGNEPS 265


>ref|XP_002533399.1| RNA (guanine-9-) methyltransferase domain containing, putative
            [Ricinus communis] gi|223526758|gb|EEF28985.1| RNA
            (guanine-9-) methyltransferase domain containing,
            putative [Ricinus communis]
          Length = 332

 Score =  283 bits (725), Expect = 9e-74
 Identities = 148/230 (64%), Positives = 172/230 (74%), Gaps = 9/230 (3%)
 Frame = -3

Query: 1592 DGQKIVVDLEFTDLMTGNEINSLVHQXXXXXXXXXXXXXXXXXXXXXXXXXVNGRCDSPA 1413
            +GQKIVVDLEF+ LMT +EI+SLV Q                         VNGRC  P 
Sbjct: 118  NGQKIVVDLEFSHLMTSSEIHSLVQQIMYCYA-------------------VNGRCALPC 158

Query: 1412 HLWLTGCRGEIQTQLRRLPGFDKWFIEKESRSYIDALEQQKENLVYLTADAETVLDELDP 1233
            HLWLTGC GE++ QL RLPGFDKW IEKESRSY++AL+  KE+LVYLTADAETVLDELD 
Sbjct: 159  HLWLTGCNGEMENQLGRLPGFDKWMIEKESRSYMEALQDHKESLVYLTADAETVLDELDL 218

Query: 1232 KKIYIIGGLVDRNRWKGITMNKAKDQGISTAKLPIGSFLKMSSSQVLTVNQVVEILLRFL 1053
            KK+YI+GGLVDRNRWKG+TM KA++QGI TAKLPIGS++KMSSSQVLTVNQV+EILL+FL
Sbjct: 219  KKVYIVGGLVDRNRWKGLTMKKAQEQGIQTAKLPIGSYMKMSSSQVLTVNQVIEILLKFL 278

Query: 1052 ETRDWKTSFFQVIPQRKRCEA------EVDVQDTEDVDIEP---KKKCTE 930
            ETRDWK SFFQVIPQRKR +       E+D ++ E+   EP   KKKC E
Sbjct: 279  ETRDWKASFFQVIPQRKRYDTGSTGDQEIDGEECEENKDEPYEKKKKCLE 328


>ref|XP_004139517.1| PREDICTED: tRNA (guanine(9)-N1)-methyltransferase-like [Cucumis
            sativus]
          Length = 333

 Score =  281 bits (720), Expect = 4e-73
 Identities = 149/232 (64%), Positives = 172/232 (74%), Gaps = 9/232 (3%)
 Frame = -3

Query: 1589 GQKIVVDLEFTDLMTGNEINSLVHQXXXXXXXXXXXXXXXXXXXXXXXXXVNGRCDSPAH 1410
            GQ IV+DLEF+ LMT  EI+SLV Q                         VNGRC SP H
Sbjct: 116  GQNIVIDLEFSHLMTPWEIHSLVQQIMYCYA-------------------VNGRCPSPCH 156

Query: 1409 LWLTGCRGEIQTQLRRLPGFDKWFIEKESRSYIDALEQQKENLVYLTADAETVLDELDPK 1230
            LWLTGC GE++TQL+RLPGFDKW IEKE RSYIDAL++QKENLVYLTAD+ETVLD+LD K
Sbjct: 157  LWLTGCNGEMETQLQRLPGFDKWIIEKECRSYIDALQEQKENLVYLTADSETVLDDLDLK 216

Query: 1229 KIYIIGGLVDRNRWKGITMNKAKDQGISTAKLPIGSFLKMSSSQVLTVNQVVEILLRFLE 1050
            KIYI+GGLVDRNRWKGITM KA++Q I TAKLPIGS+LKMSSSQVLTVNQV+EILL++LE
Sbjct: 217  KIYIVGGLVDRNRWKGITMKKAQEQEIQTAKLPIGSYLKMSSSQVLTVNQVIEILLKYLE 276

Query: 1049 TRDWKTSFFQVIPQRKRCEAE------VDVQDTEDVDIE---PKKKCTERSS 921
            TRDWK SFF+V+PQRKRC  +      VD ++  D D +    K KC E SS
Sbjct: 277  TRDWKDSFFEVVPQRKRCGGDSNSDHPVDGEENGDGDNKNETKKTKCDEVSS 328


>emb|CAN75735.1| hypothetical protein VITISV_030149 [Vitis vinifera]
          Length = 326

 Score =  281 bits (719), Expect = 5e-73
 Identities = 154/247 (62%), Positives = 179/247 (72%), Gaps = 1/247 (0%)
 Frame = -3

Query: 1589 GQKIVVDLEFTDLMTGNEINSLVHQXXXXXXXXXXXXXXXXXXXXXXXXXVNGRCDSPAH 1410
            GQ IVVDL+F+DLMT NEINSLV Q                         VN RC SP H
Sbjct: 111  GQNIVVDLDFSDLMTPNEINSLVQQIMYCYA-------------------VNRRCASPCH 151

Query: 1409 LWLTGCRGEIQTQLRRLPGFDKWFIEKESRSYIDALEQQKENLVYLTADAETVLDELDPK 1230
            LWLTGC G++ +QL+RLPGFDKW IEKE++SYI+AL+ +K NLVYLTAD+ET+LDELDPK
Sbjct: 152  LWLTGCNGKMGSQLQRLPGFDKWIIEKENQSYIEALQDEKHNLVYLTADSETILDELDPK 211

Query: 1229 KIYIIGGLVDRNRWKGITMNKAKDQGISTAKLPIGSFLKMSSSQVLTVNQVVEILLRFLE 1050
            KIYI+GGLVDRNRWKGITM KA++QGI TAKLPIG++LKMSSSQVLTVNQV+EILL+FLE
Sbjct: 212  KIYIVGGLVDRNRWKGITMKKAQEQGIQTAKLPIGNYLKMSSSQVLTVNQVIEILLKFLE 271

Query: 1049 TRDWKTSFFQVIPQRKRCEAEVDVQDTEDVDIEPKKKCTERSSYAETEV*EGSD-VETKK 873
            T+DWK SFFQVIPQRKR  A     D+ED   E ++         E E  EG D +E KK
Sbjct: 272  TKDWKASFFQVIPQRKRGGA-----DSEDCQGEVEEG-------EENE--EGEDQLEMKK 317

Query: 872  KCTEQPS 852
              TE PS
Sbjct: 318  MRTESPS 324


Top