BLASTX nr result

ID: Coptis25_contig00009401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009401
         (938 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU18349.1| unknown [Glycine max]                                  352   6e-95
ref|XP_004144008.1| PREDICTED: WD repeat-containing protein DWA1...   351   1e-94
ref|XP_003541292.1| PREDICTED: eukaryotic initiation factor 4A-1...   351   1e-94
ref|XP_003550627.1| PREDICTED: uncharacterized protein LOC100806...   348   1e-93
emb|CBI27884.3| unnamed protein product [Vitis vinifera]              347   3e-93

>gb|ACU18349.1| unknown [Glycine max]
          Length = 374

 Score =  352 bits (904), Expect = 6e-95
 Identities = 159/219 (72%), Positives = 189/219 (86%)
 Frame = -2

Query: 937 GPWGALSPIPENNAIAIDSQGGSIFSAAGDSFAYCWDVETTKIKMVFKGHSDYLHCIAAR 758
           GPWGALSP+PENNAIA+++QGGS+F+A+GDS AYCWDVET K+KMVFKGH DYLHCI AR
Sbjct: 154 GPWGALSPVPENNAIAVNTQGGSVFAASGDSCAYCWDVETGKVKMVFKGHMDYLHCIVAR 213

Query: 757 NSSNQIITGSEDGTVRTWDCKSGKCVHVIDPAKNTELKGTFSWISCIALDASETWLAFSS 578
           NSSNQIITGSEDGT R WDCKSGKC  VIDPA++ +LKG+ SW+ C+ALDASE+WLA SS
Sbjct: 214 NSSNQIITGSEDGTTRIWDCKSGKCTQVIDPARDLKLKGSASWVGCVALDASESWLACSS 273

Query: 577 GKTLSIWNLPASEPVTRVVTGYPIQDLLFDENQILAVGAEPVLSRFDMNGTTLSQINCAP 398
           G+ +S+WNLPASE V+++ T   +QD+ FD NQIL VG +P+L+RFDMNGTTLSQI CAP
Sbjct: 274 GRNISLWNLPASECVSKIPTRACVQDMSFDNNQILTVGTDPLLNRFDMNGTTLSQIQCAP 333

Query: 397 QSGFSVSLHSCGVTAVGGYGGLVDIISQFGSHLCTFCCR 281
            S FS+SLH  GV AVGGYG LVD+ISQFGSH+CTF C+
Sbjct: 334 SSSFSISLHPAGVMAVGGYGCLVDVISQFGSHMCTFRCQ 372


>ref|XP_004144008.1| PREDICTED: WD repeat-containing protein DWA1-like [Cucumis sativus]
           gi|449489893|ref|XP_004158451.1| PREDICTED: WD
           repeat-containing protein DWA1-like [Cucumis sativus]
          Length = 369

 Score =  351 bits (901), Expect = 1e-94
 Identities = 160/221 (72%), Positives = 192/221 (86%)
 Frame = -2

Query: 937 GPWGALSPIPENNAIAIDSQGGSIFSAAGDSFAYCWDVETTKIKMVFKGHSDYLHCIAAR 758
           GPWGALSPIPENNAIA D+Q GSIFSAAGDS AYCWD+E+ K+KMVFKGHSDYLHCI AR
Sbjct: 149 GPWGALSPIPENNAIATDAQSGSIFSAAGDSCAYCWDLESGKVKMVFKGHSDYLHCIVAR 208

Query: 757 NSSNQIITGSEDGTVRTWDCKSGKCVHVIDPAKNTELKGTFSWISCIALDASETWLAFSS 578
           N+ NQIITGSEDGT R WDCKSGKC+ +IDPAK+ +LKG FS++ CIALDASE+WLA + 
Sbjct: 209 NTVNQIITGSEDGTARIWDCKSGKCIQLIDPAKDKKLKGHFSFVRCIALDASESWLACAD 268

Query: 577 GKTLSIWNLPASEPVTRVVTGYPIQDLLFDENQILAVGAEPVLSRFDMNGTTLSQINCAP 398
           G+++S+WNLP+SE +++ +T   +QD++F +NQIL VGAEP L+RFD+NG+ LSQI CAP
Sbjct: 269 GRSISVWNLPSSEFISKTLTRSSLQDMVFCDNQILGVGAEPFLTRFDINGSVLSQIQCAP 328

Query: 397 QSGFSVSLHSCGVTAVGGYGGLVDIISQFGSHLCTFCCRGR 275
           QS FSV+LH  GV AVGGYGGLVD+ISQFGSHLCTFCC+ R
Sbjct: 329 QSAFSVALHPSGVAAVGGYGGLVDVISQFGSHLCTFCCQYR 369


>ref|XP_003541292.1| PREDICTED: eukaryotic initiation factor 4A-15-like [Glycine max]
          Length = 821

 Score =  351 bits (901), Expect = 1e-94
 Identities = 161/230 (70%), Positives = 193/230 (83%)
 Frame = -2

Query: 937 GPWGALSPIPENNAIAIDSQGGSIFSAAGDSFAYCWDVETTKIKMVFKGHSDYLHCIAAR 758
           GPWGALSP+PENNAIA+++QGGS+F+A+GDS AYCWDVET K+KMVFKGH DYLHCI AR
Sbjct: 154 GPWGALSPVPENNAIAVNTQGGSVFAASGDSCAYCWDVETGKVKMVFKGHMDYLHCIVAR 213

Query: 757 NSSNQIITGSEDGTVRTWDCKSGKCVHVIDPAKNTELKGTFSWISCIALDASETWLAFSS 578
           NSSNQIITGSEDGT R WDCKSGKC  VIDPA++ +LKG+ SW+ C+ALDASE+WLA SS
Sbjct: 214 NSSNQIITGSEDGTTRIWDCKSGKCTQVIDPARDLKLKGSASWVGCVALDASESWLACSS 273

Query: 577 GKTLSIWNLPASEPVTRVVTGYPIQDLLFDENQILAVGAEPVLSRFDMNGTTLSQINCAP 398
           G+ +S+WNLPASE V+++ T   +QD+ FD NQIL VG +P+L+RFDMNGT LSQI CAP
Sbjct: 274 GRNISLWNLPASECVSKIPTRACVQDMSFDNNQILTVGTDPLLNRFDMNGTILSQIQCAP 333

Query: 397 QSGFSVSLHSCGVTAVGGYGGLVDIISQFGSHLCTFCCRGR*CIALSGFS 248
            S FS+SLH  GV AVGGYG LVD+ISQFGSH+CTF C+   C+ L  F+
Sbjct: 334 SSSFSISLHPAGVMAVGGYGCLVDVISQFGSHMCTFRCQF--CVLLFDFT 381


>ref|XP_003550627.1| PREDICTED: uncharacterized protein LOC100806423 [Glycine max]
          Length = 863

 Score =  348 bits (893), Expect = 1e-93
 Identities = 157/219 (71%), Positives = 188/219 (85%)
 Frame = -2

Query: 937 GPWGALSPIPENNAIAIDSQGGSIFSAAGDSFAYCWDVETTKIKMVFKGHSDYLHCIAAR 758
           GPWGALSPIPENNAIA+++QGGS+F+A+GDS AYCWDVET K+KMVFKGH DYLHCI AR
Sbjct: 154 GPWGALSPIPENNAIAVNTQGGSVFAASGDSCAYCWDVETGKVKMVFKGHMDYLHCIVAR 213

Query: 757 NSSNQIITGSEDGTVRTWDCKSGKCVHVIDPAKNTELKGTFSWISCIALDASETWLAFSS 578
           NS +QIITGSEDGT R WDCKSGKC  VIDPA++ +LKG+ SW+ C+ALDASE+WLA SS
Sbjct: 214 NSLDQIITGSEDGTTRIWDCKSGKCTQVIDPARDLKLKGSASWVGCVALDASESWLACSS 273

Query: 577 GKTLSIWNLPASEPVTRVVTGYPIQDLLFDENQILAVGAEPVLSRFDMNGTTLSQINCAP 398
           G+ +S+WNLPASE ++++ T   +QD+LFD NQIL VG +P+L+RFDMNGT LSQI CAP
Sbjct: 274 GRNISLWNLPASECISKIPTRACVQDMLFDNNQILTVGTDPLLNRFDMNGTILSQIQCAP 333

Query: 397 QSGFSVSLHSCGVTAVGGYGGLVDIISQFGSHLCTFCCR 281
            S FS+SLH  GV AVGGYG LVD+ISQFGSH+CTF C+
Sbjct: 334 SSSFSISLHPAGVMAVGGYGCLVDVISQFGSHMCTFHCQ 372


>emb|CBI27884.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  347 bits (889), Expect = 3e-93
 Identities = 165/221 (74%), Positives = 189/221 (85%)
 Frame = -2

Query: 937 GPWGALSPIPENNAIAIDSQGGSIFSAAGDSFAYCWDVETTKIKMVFKGHSDYLHCIAAR 758
           GPWGALSP+PENNAIA+++Q GS+F+AAGDS AYCWDVE +KIKMVFKGHSDYLHCI AR
Sbjct: 154 GPWGALSPVPENNAIAVNAQWGSVFAAAGDSCAYCWDVEKSKIKMVFKGHSDYLHCIIAR 213

Query: 757 NSSNQIITGSEDGTVRTWDCKSGKCVHVIDPAKNTELKGTFSWISCIALDASETWLAFSS 578
           NSSNQIITGSEDGT R WDC+SGKC+ VID  K+ + K  FS +SCIALDASE+WLA+  
Sbjct: 214 NSSNQIITGSEDGTARIWDCQSGKCIQVIDAKKDKKPKEIFSCVSCIALDASESWLAYGR 273

Query: 577 GKTLSIWNLPASEPVTRVVTGYPIQDLLFDENQILAVGAEPVLSRFDMNGTTLSQINCAP 398
           G++LS+WNLPA E VTRV T    QD++FD+NQILAVGAEP+LSRFD+NG  LSQI CAP
Sbjct: 274 GRSLSVWNLPACERVTRVSTHASFQDIVFDDNQILAVGAEPLLSRFDINGVILSQIQCAP 333

Query: 397 QSGFSVSLHSCGVTAVGGYGGLVDIISQFGSHLCTFCCRGR 275
           QS FSVSLH  GVTAV GYGG+VD+ISQFGSHLCTF  RGR
Sbjct: 334 QSAFSVSLHPSGVTAVAGYGGVVDVISQFGSHLCTF--RGR 372


Top