BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009397
         (3695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273351.1| PREDICTED: transcription initiation factor T...   902   0.0  
ref|XP_002273382.1| PREDICTED: transcription initiation factor T...   902   0.0  
ref|XP_003549807.1| PREDICTED: transcription initiation factor T...   870   0.0  
ref|XP_003549806.1| PREDICTED: transcription initiation factor T...   870   0.0  
ref|XP_003525647.1| PREDICTED: transcription initiation factor T...   867   0.0  

>ref|XP_002273351.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
            isoform 1 [Vitis vinifera]
          Length = 1325

 Score =  902 bits (2332), Expect(2) = 0.0
 Identities = 445/571 (77%), Positives = 492/571 (86%), Gaps = 1/571 (0%)
 Frame = +2

Query: 2    GTLLYQVLSKDDPPRKTFVYSLSVPVAARWISLVVAQFEILVDSHNGIISHMCLSPDILK 181
            G+LLYQVLSKDDPPRKT+VY L+VPV ARWI L VA FE+L D H+G++S++CL  ++ K
Sbjct: 219  GSLLYQVLSKDDPPRKTYVYKLNVPVTARWIQLAVAPFEVLPDRHSGLLSYLCLPANLPK 278

Query: 182  LRNTATFFHSAFSHYEDYLSAPFPFGSYKQVFIAPEMTISSLSIGASMSIFSSQVLFDEK 361
            L NT  FFHSAFSHYEDYLSA FPFGSYKQVFIAPEM ISSL++GASMSIFSSQ+LFDEK
Sbjct: 279  LWNTVGFFHSAFSHYEDYLSASFPFGSYKQVFIAPEMAISSLTLGASMSIFSSQILFDEK 338

Query: 362  VIDQTISTRIKLAYALARQWFGVYISADSPSDEWLLDGLADFLTDSFIKRFLGNNEARYR 541
            VIDQTI TRIKLAYALARQWFGV+IS ++P+DEWLLDGLA FLTDSF+KRFLGNNEARYR
Sbjct: 339  VIDQTIDTRIKLAYALARQWFGVFISPEAPNDEWLLDGLAGFLTDSFVKRFLGNNEARYR 398

Query: 542  RYKENSAVCKADVSGASTLSCSAAT-DLYGTQCLGLSGKIRSWKSVAVLQMLEKQMGPES 718
            RYK N AVCKAD SGA+ LS SA+  DLYGTQC+GL GKIRSWKSVA+LQMLEKQMGPES
Sbjct: 399  RYKANCAVCKADDSGATALSSSASCKDLYGTQCIGLYGKIRSWKSVAILQMLEKQMGPES 458

Query: 719  FRKILQVIILRAQDKTRSLRTLSTKEFRHFSNKVGNLERPFLKEFFPRWVGSCGCPVLRM 898
            FRKILQ I+ RAQD TRSLRTLSTKEFRHF+NKVGNLERPFLKEFFPRWVGSCGCPVLR 
Sbjct: 459  FRKILQTIVFRAQDTTRSLRTLSTKEFRHFANKVGNLERPFLKEFFPRWVGSCGCPVLRA 518

Query: 899  GLSYNKRKNIIELAVFRGCTAAQNAVSVEHSNNHDSETREGDVGWPGMMSIRVYELDGMY 1078
            GLSYNKRKN++ELAV RGCTAA +  ++  + N DSE RE D+GWPGMMSIRV+ELDGMY
Sbjct: 519  GLSYNKRKNLVELAVLRGCTAAPDTNTMVLNGNIDSENREVDIGWPGMMSIRVHELDGMY 578

Query: 1079 DHPILPMSGEALQLLEIQCHSRLAAKRIQKPKKGSKLDGSDDNGETPTADLRTNXXXXXX 1258
            DHPILPM+GE  QLLEIQCHS+LAA+R QKPKKGSK DGSDDNG+ P  D+R+N      
Sbjct: 579  DHPILPMAGETWQLLEIQCHSKLAARRFQKPKKGSKPDGSDDNGDVPAVDMRSN------ 632

Query: 1259 XXXXXXXXXXXXXXXXXXXXAESPLLWLRADPQMEYLAKIHFNQPIQMWINQLEKDRDVV 1438
                                 ESPLLWLR DP++EYLA+IHFNQP QMWINQLE+D+DVV
Sbjct: 633  --------------------TESPLLWLRVDPELEYLAEIHFNQPAQMWINQLERDKDVV 672

Query: 1439 AQAQAIATLEALPQLSFSVVNALYNFLSDSKAFWRVRIEAAFALANTASEDTDWAGLLHL 1618
            AQAQAIATLEALPQLSFSVVNAL NFLSDSKAFWRVRIEAAFALANTASE+TDWAGLLHL
Sbjct: 673  AQAQAIATLEALPQLSFSVVNALNNFLSDSKAFWRVRIEAAFALANTASEETDWAGLLHL 732

Query: 1619 VKFYKSRRFDETMGLPRPNDFHDFPEYFVLE 1711
            VKFYKSRRFD  +GLP+PNDFHDFPEYFVLE
Sbjct: 733  VKFYKSRRFDANIGLPKPNDFHDFPEYFVLE 763



 Score =  453 bits (1166), Expect(2) = 0.0
 Identities = 297/625 (47%), Positives = 368/625 (58%), Gaps = 20/625 (3%)
 Frame = +3

Query: 1758 EAIPHAIAMVRAADKKSPREAVEFLLQLLKYNDNNGNPYSDVYWLAALVQSIGELEFGQQ 1937
            EAIPHAIAMVRAADKKSPREAVEF+LQLLKYNDNNGNPYSDV+WLAALVQS+GELEFGQQ
Sbjct: 763  EAIPHAIAMVRAADKKSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQ 822

Query: 1938 NKL-LSSLLKRIDRLLQFERLMPSYNGILTISCIRSLTQTALKLSASIPLDRVSELIKPF 2114
            + L LSSLLKRIDRLLQF+RLMPSYNGILTISCIR+LTQ  LKLS  IPLDRV EL+KPF
Sbjct: 823  SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIGLKLSGFIPLDRVIELVKPF 882

Query: 2115 RDFGTLWKVRIEASRALLDLEFQCNGIDAALILFTRYLEEEASLRGQVKLSLHAMRLCQI 2294
            RDF  +W+VRIEASRALL LEF                      +GQVKL +HAMRLCQI
Sbjct: 883  RDFQAIWQVRIEASRALLGLEFH--------------------FKGQVKLGVHAMRLCQI 922

Query: 2295 KG----EDVIKASTXXXXXXXXEGRKAFNNVLLRHHLFCLFQILSGRPSTLYGIPRTQVQ 2462
            KG    ++ IK+ST        E R AFNNV LRHHLFC+ +IL+GR  TLYG+PR Q+ 
Sbjct: 923  KGGSESDNDIKSSTLVALLRLLESRIAFNNVFLRHHLFCILRILAGRLPTLYGVPRDQIP 982

Query: 2463 PSGEPKTCSEQIKTAFLKLKISRPSEPLGDAQNLLPDALPIPEDSKEAIPIPEASKEADT 2642
                 + CSEQ       +K ++  EP  D  N+          S + + +PEAS+EADT
Sbjct: 983  QMDPAEICSEQKNGFITIVKETKSLEPPVDTPNV----------SHDGLALPEASREADT 1032

Query: 2643 VSNGSERKRAVLKIKVKQXXXXXXXXXXXKVVVNISDGVQDEAERGGSSSMSVDAPVRVT 2822
            VSN  ERK  V+KI+V+Q              V+ S G  +E +RGGSSS+SVDAP R  
Sbjct: 1033 VSNSHERKMPVVKIRVRQSAASSRAEEADNPTVDKSQGGHNEIDRGGSSSISVDAPQRNF 1092

Query: 2823 SEPLNADCQIIEEVNSCHDRDSRITASIGSVKPVNNLDENRNELQCTADSSTVDCQLQPE 3002
            +E ++   Q +EEVNSCHDR S++TASIGS K  ++ DE   ELQCTADS  +   L P 
Sbjct: 1093 TEAVSISNQNLEEVNSCHDRGSQMTASIGSAKLASDGDEVGKELQCTADSGKISV-LPPS 1151

Query: 3003 DR-----SLPNI----IKGNGVGPETQKYSSLQTLSVGRNDHGAQSLGLEDQDFCXXXXX 3155
            D       + +I    I+ N V  + QKY+SLQTLSV R++  A+    +++        
Sbjct: 1152 DEGPLFSGIQDIQGGSIQDNIVDVDAQKYASLQTLSVMRHEVEAKEKKEKEK-------- 1203

Query: 3156 XXXXXXXXXXXXXXXXXXXXXXXXXPEYXXXXXXXXXXXXXXXXIMKLQSGNVKLS---- 3323
                                     PEY                + +L SG  K      
Sbjct: 1204 -------------------KRKREDPEYLERKRLKKEKKQKEKEMAQLLSGEAKQKEKEM 1244

Query: 3324 STALQSTSFEPGGEFA-LQTRDLRASFVGLCTNE-EPRVKPAPVELKPNEPGNSEVVSKP 3497
            S  L   + +   E   L + D +AS V L   + E  +K A V+ K +E      VSK 
Sbjct: 1245 SELLSGEAKQKEKEMTELLSGDAKASSVELGVKKVESGIKLATVQYKASESS----VSKI 1300

Query: 3498 LETKGDGLEGSSSVRKIRLKIKDRN 3572
            + TK +  EGSS+  K R+KIK+R+
Sbjct: 1301 VTTKVEASEGSSA-PKFRIKIKNRS 1324


>ref|XP_002273382.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
            isoform 2 [Vitis vinifera]
          Length = 1345

 Score =  902 bits (2332), Expect(2) = 0.0
 Identities = 445/571 (77%), Positives = 492/571 (86%), Gaps = 1/571 (0%)
 Frame = +2

Query: 2    GTLLYQVLSKDDPPRKTFVYSLSVPVAARWISLVVAQFEILVDSHNGIISHMCLSPDILK 181
            G+LLYQVLSKDDPPRKT+VY L+VPV ARWI L VA FE+L D H+G++S++CL  ++ K
Sbjct: 219  GSLLYQVLSKDDPPRKTYVYKLNVPVTARWIQLAVAPFEVLPDRHSGLLSYLCLPANLPK 278

Query: 182  LRNTATFFHSAFSHYEDYLSAPFPFGSYKQVFIAPEMTISSLSIGASMSIFSSQVLFDEK 361
            L NT  FFHSAFSHYEDYLSA FPFGSYKQVFIAPEM ISSL++GASMSIFSSQ+LFDEK
Sbjct: 279  LWNTVGFFHSAFSHYEDYLSASFPFGSYKQVFIAPEMAISSLTLGASMSIFSSQILFDEK 338

Query: 362  VIDQTISTRIKLAYALARQWFGVYISADSPSDEWLLDGLADFLTDSFIKRFLGNNEARYR 541
            VIDQTI TRIKLAYALARQWFGV+IS ++P+DEWLLDGLA FLTDSF+KRFLGNNEARYR
Sbjct: 339  VIDQTIDTRIKLAYALARQWFGVFISPEAPNDEWLLDGLAGFLTDSFVKRFLGNNEARYR 398

Query: 542  RYKENSAVCKADVSGASTLSCSAAT-DLYGTQCLGLSGKIRSWKSVAVLQMLEKQMGPES 718
            RYK N AVCKAD SGA+ LS SA+  DLYGTQC+GL GKIRSWKSVA+LQMLEKQMGPES
Sbjct: 399  RYKANCAVCKADDSGATALSSSASCKDLYGTQCIGLYGKIRSWKSVAILQMLEKQMGPES 458

Query: 719  FRKILQVIILRAQDKTRSLRTLSTKEFRHFSNKVGNLERPFLKEFFPRWVGSCGCPVLRM 898
            FRKILQ I+ RAQD TRSLRTLSTKEFRHF+NKVGNLERPFLKEFFPRWVGSCGCPVLR 
Sbjct: 459  FRKILQTIVFRAQDTTRSLRTLSTKEFRHFANKVGNLERPFLKEFFPRWVGSCGCPVLRA 518

Query: 899  GLSYNKRKNIIELAVFRGCTAAQNAVSVEHSNNHDSETREGDVGWPGMMSIRVYELDGMY 1078
            GLSYNKRKN++ELAV RGCTAA +  ++  + N DSE RE D+GWPGMMSIRV+ELDGMY
Sbjct: 519  GLSYNKRKNLVELAVLRGCTAAPDTNTMVLNGNIDSENREVDIGWPGMMSIRVHELDGMY 578

Query: 1079 DHPILPMSGEALQLLEIQCHSRLAAKRIQKPKKGSKLDGSDDNGETPTADLRTNXXXXXX 1258
            DHPILPM+GE  QLLEIQCHS+LAA+R QKPKKGSK DGSDDNG+ P  D+R+N      
Sbjct: 579  DHPILPMAGETWQLLEIQCHSKLAARRFQKPKKGSKPDGSDDNGDVPAVDMRSN------ 632

Query: 1259 XXXXXXXXXXXXXXXXXXXXAESPLLWLRADPQMEYLAKIHFNQPIQMWINQLEKDRDVV 1438
                                 ESPLLWLR DP++EYLA+IHFNQP QMWINQLE+D+DVV
Sbjct: 633  --------------------TESPLLWLRVDPELEYLAEIHFNQPAQMWINQLERDKDVV 672

Query: 1439 AQAQAIATLEALPQLSFSVVNALYNFLSDSKAFWRVRIEAAFALANTASEDTDWAGLLHL 1618
            AQAQAIATLEALPQLSFSVVNAL NFLSDSKAFWRVRIEAAFALANTASE+TDWAGLLHL
Sbjct: 673  AQAQAIATLEALPQLSFSVVNALNNFLSDSKAFWRVRIEAAFALANTASEETDWAGLLHL 732

Query: 1619 VKFYKSRRFDETMGLPRPNDFHDFPEYFVLE 1711
            VKFYKSRRFD  +GLP+PNDFHDFPEYFVLE
Sbjct: 733  VKFYKSRRFDANIGLPKPNDFHDFPEYFVLE 763



 Score =  491 bits (1263), Expect(2) = 0.0
 Identities = 311/625 (49%), Positives = 384/625 (61%), Gaps = 20/625 (3%)
 Frame = +3

Query: 1758 EAIPHAIAMVRAADKKSPREAVEFLLQLLKYNDNNGNPYSDVYWLAALVQSIGELEFGQQ 1937
            EAIPHAIAMVRAADKKSPREAVEF+LQLLKYNDNNGNPYSDV+WLAALVQS+GELEFGQQ
Sbjct: 763  EAIPHAIAMVRAADKKSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQ 822

Query: 1938 NKL-LSSLLKRIDRLLQFERLMPSYNGILTISCIRSLTQTALKLSASIPLDRVSELIKPF 2114
            + L LSSLLKRIDRLLQF+RLMPSYNGILTISCIR+LTQ  LKLS  IPLDRV EL+KPF
Sbjct: 823  SILFLSSLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIGLKLSGFIPLDRVIELVKPF 882

Query: 2115 RDFGTLWKVRIEASRALLDLEFQCNGIDAALILFTRYLEEEASLRGQVKLSLHAMRLCQI 2294
            RDF  +W+VRIEASRALL LEF   GIDAAL LF +Y+EEE S+RGQVKL +HAMRLCQI
Sbjct: 883  RDFQAIWQVRIEASRALLGLEFHFKGIDAALSLFIKYVEEEPSIRGQVKLGVHAMRLCQI 942

Query: 2295 KG----EDVIKASTXXXXXXXXEGRKAFNNVLLRHHLFCLFQILSGRPSTLYGIPRTQVQ 2462
            KG    ++ IK+ST        E R AFNNV LRHHLFC+ +IL+GR  TLYG+PR Q+ 
Sbjct: 943  KGGSESDNDIKSSTLVALLRLLESRIAFNNVFLRHHLFCILRILAGRLPTLYGVPRDQIP 1002

Query: 2463 PSGEPKTCSEQIKTAFLKLKISRPSEPLGDAQNLLPDALPIPEDSKEAIPIPEASKEADT 2642
                 + CSEQ       +K ++  EP  D  N+          S + + +PEAS+EADT
Sbjct: 1003 QMDPAEICSEQKNGFITIVKETKSLEPPVDTPNV----------SHDGLALPEASREADT 1052

Query: 2643 VSNGSERKRAVLKIKVKQXXXXXXXXXXXKVVVNISDGVQDEAERGGSSSMSVDAPVRVT 2822
            VSN  ERK  V+KI+V+Q              V+ S G  +E +RGGSSS+SVDAP R  
Sbjct: 1053 VSNSHERKMPVVKIRVRQSAASSRAEEADNPTVDKSQGGHNEIDRGGSSSISVDAPQRNF 1112

Query: 2823 SEPLNADCQIIEEVNSCHDRDSRITASIGSVKPVNNLDENRNELQCTADSSTVDCQLQPE 3002
            +E ++   Q +EEVNSCHDR S++TASIGS K  ++ DE   ELQCTADS  +   L P 
Sbjct: 1113 TEAVSISNQNLEEVNSCHDRGSQMTASIGSAKLASDGDEVGKELQCTADSGKISV-LPPS 1171

Query: 3003 DR-----SLPNI----IKGNGVGPETQKYSSLQTLSVGRNDHGAQSLGLEDQDFCXXXXX 3155
            D       + +I    I+ N V  + QKY+SLQTLSV R++  A+    +++        
Sbjct: 1172 DEGPLFSGIQDIQGGSIQDNIVDVDAQKYASLQTLSVMRHEVEAKEKKEKEK-------- 1223

Query: 3156 XXXXXXXXXXXXXXXXXXXXXXXXXPEYXXXXXXXXXXXXXXXXIMKLQSGNVKLS---- 3323
                                     PEY                + +L SG  K      
Sbjct: 1224 -------------------KRKREDPEYLERKRLKKEKKQKEKEMAQLLSGEAKQKEKEM 1264

Query: 3324 STALQSTSFEPGGEFA-LQTRDLRASFVGLCTNE-EPRVKPAPVELKPNEPGNSEVVSKP 3497
            S  L   + +   E   L + D +AS V L   + E  +K A V+ K +E      VSK 
Sbjct: 1265 SELLSGEAKQKEKEMTELLSGDAKASSVELGVKKVESGIKLATVQYKASESS----VSKI 1320

Query: 3498 LETKGDGLEGSSSVRKIRLKIKDRN 3572
            + TK +  EGSS+  K R+KIK+R+
Sbjct: 1321 VTTKVEASEGSSA-PKFRIKIKNRS 1344


>ref|XP_003549807.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
            isoform 2 [Glycine max]
          Length = 1368

 Score =  870 bits (2249), Expect(2) = 0.0
 Identities = 427/571 (74%), Positives = 482/571 (84%), Gaps = 1/571 (0%)
 Frame = +2

Query: 2    GTLLYQVLSKDDPPRKTFVYSLSVPVAARWISLVVAQFEILVDSHNGIISHMCLSPDILK 181
            G+LLYQVLSKD+PP+KT+VY L VPVAARWISL VA FEIL D    +ISHMC  P++ K
Sbjct: 220  GSLLYQVLSKDNPPQKTYVYKLDVPVAARWISLAVAPFEILPDHQFSLISHMCSLPNLSK 279

Query: 182  LRNTATFFHSAFSHYEDYLSAPFPFGSYKQVFIAPEMTISSLSIGASMSIFSSQVLFDEK 361
            +RNT  FFHSAFS Y+DYLS  FPF SY QVFI PEM +SSLS+GASMS+FSSQVLFDEK
Sbjct: 280  MRNTVDFFHSAFSCYKDYLSVDFPFDSYTQVFIEPEMAVSSLSLGASMSVFSSQVLFDEK 339

Query: 362  VIDQTISTRIKLAYALARQWFGVYISADSPSDEWLLDGLADFLTDSFIKRFLGNNEARYR 541
            VIDQTI TR+KLAYALARQWFGVYI+ ++P+DEWLLDGLA FLTD FIK+ LGNNEARYR
Sbjct: 340  VIDQTIDTRVKLAYALARQWFGVYITPEAPNDEWLLDGLAGFLTDFFIKKHLGNNEARYR 399

Query: 542  RYKENSAVCKADVSGASTLSCSAAT-DLYGTQCLGLSGKIRSWKSVAVLQMLEKQMGPES 718
            RYK N AVCK D  GA+ LSCSA+  DLYGTQC+GL GKIRSWKSVA LQMLEKQMGPES
Sbjct: 400  RYKANCAVCKVDNGGATALSCSASCKDLYGTQCIGLYGKIRSWKSVAALQMLEKQMGPES 459

Query: 719  FRKILQVIILRAQDKTRSLRTLSTKEFRHFSNKVGNLERPFLKEFFPRWVGSCGCPVLRM 898
            FR+ILQ I+ RAQDKTRS++TLSTKEFRHF+NKVGNLERPFLK+FFPRWVGSCGCPVLRM
Sbjct: 460  FRRILQTIVSRAQDKTRSIKTLSTKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPVLRM 519

Query: 899  GLSYNKRKNIIELAVFRGCTAAQNAVSVEHSNNHDSETREGDVGWPGMMSIRVYELDGMY 1078
            G SYNKRKN++ELAV RGCTA Q + +     N D+ETR+GD GWPGMMSIRVYELDGMY
Sbjct: 520  GFSYNKRKNMVELAVLRGCTALQTSNTSILDINPDTETRDGDTGWPGMMSIRVYELDGMY 579

Query: 1079 DHPILPMSGEALQLLEIQCHSRLAAKRIQKPKKGSKLDGSDDNGETPTADLRTNXXXXXX 1258
            DHPILPM+G+A QLLEIQCHS+LAA+R QKPKKG KLDGSDDNG+ P+ D+R+N      
Sbjct: 580  DHPILPMAGDAWQLLEIQCHSKLAARRFQKPKKGLKLDGSDDNGDVPSMDMRSN------ 633

Query: 1259 XXXXXXXXXXXXXXXXXXXXAESPLLWLRADPQMEYLAKIHFNQPIQMWINQLEKDRDVV 1438
                                 ESPLLW+RADP MEYLA++HFNQP+QMWINQLEKD+DV+
Sbjct: 634  --------------------TESPLLWIRADPDMEYLAEVHFNQPVQMWINQLEKDKDVI 673

Query: 1439 AQAQAIATLEALPQLSFSVVNALYNFLSDSKAFWRVRIEAAFALANTASEDTDWAGLLHL 1618
            AQAQAIA LEA PQLSFS+VNAL NFLSDSKAFWRVRIEAAFALAN+ASE+TD++GLLHL
Sbjct: 674  AQAQAIAALEASPQLSFSIVNALNNFLSDSKAFWRVRIEAAFALANSASEETDFSGLLHL 733

Query: 1619 VKFYKSRRFDETMGLPRPNDFHDFPEYFVLE 1711
            +KFYKSRRFD  +GLP+PNDFHDF EYFVLE
Sbjct: 734  MKFYKSRRFDTDIGLPKPNDFHDFAEYFVLE 764



 Score =  425 bits (1093), Expect(2) = 0.0
 Identities = 299/655 (45%), Positives = 359/655 (54%), Gaps = 47/655 (7%)
 Frame = +3

Query: 1758 EAIPHAIAMVRAADKKSPREAVEFLLQLLKYNDNNGNPYSDVYWLAALVQSIGELEFGQQ 1937
            EAIPHA+AMVRAADKKSPREA+EF+LQLLKYNDNNGNPYSDV+WLAALVQS+GELEFGQQ
Sbjct: 764  EAIPHAVAMVRAADKKSPREAIEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQ 823

Query: 1938 N-KLLSSLLKRIDRLLQFERLMPSYNGILTISCIRSLTQTALKLSASIPLDRVSELIKPF 2114
            +  LLSSLLKRIDRLLQF+ LMPSYNGILTISCIR+LTQ ALKLS  IPLDRV  L+KPF
Sbjct: 824  SILLLSSLLKRIDRLLQFDSLMPSYNGILTISCIRTLTQIALKLSGFIPLDRVYGLVKPF 883

Query: 2115 RDFGTLWKVRIEASRALLDLEFQCNGIDAALILFTRYLEEEASLRGQVKLSLHAMRLCQI 2294
            RD   LW+VRIEASRALLDLEF C                    +GQ+KL+ H MRLCQ+
Sbjct: 884  RDIKALWQVRIEASRALLDLEFHC--------------------KGQLKLATHVMRLCQM 923

Query: 2295 K----GEDVIKASTXXXXXXXXEGRKAFNNVLLRHHLFCLFQILSGRPSTLYGIPR---- 2450
            +      D I + T        EGR AFNN  LRH+LFC+ QIL+ R  TL+GIPR    
Sbjct: 924  RDGLNSNDEITSQTLVSMLNLLEGRIAFNNAFLRHYLFCILQILARRHPTLHGIPRENRM 983

Query: 2451 ---TQVQPSGEPK---TCSEQIKTAFLKLKISRPSEPLGDAQNLLPDAL-PIPEDS---- 2597
               +  + S   K       + K   L   I   ++ LG     L DAL   P+D     
Sbjct: 984  LHMSLTEASNYQKNMLALDSESKPLDLPSSIDDLTQNLGPTMEGLRDALDEAPKDQPCEA 1043

Query: 2598 ---------KEA---------------IPIP---EASKEADTVSNGSERKRAVLKIKVKQ 2696
                     KEA                PI    E SKEADTVSN  ERKR + KIKVKQ
Sbjct: 1044 PTQVHLEALKEASLEKPKEVFTEFPQEAPIEAPNEISKEADTVSNSHERKRPI-KIKVKQ 1102

Query: 2697 XXXXXXXXXXXKVVVNISDGVQDEAERGGSSSMSVDAPVRVTSEPLNADCQIIEEVNSCH 2876
                       +VV   S G ++E + G SSS+SVDAP R  +E ++     I+EVNS H
Sbjct: 1103 SSATSRADTDNQVVER-SLGGRNEMDHGASSSVSVDAPQRNFAETVSISNHNIDEVNSWH 1161

Query: 2877 DRDSRITASIGSVKPVNNLDENRNELQCTADSSTVDCQLQPEDRSLPNIIKGNGVGPETQ 3056
            DR SR+TASIGS K +++ DE   ELQCTADSS V  Q QPED S  +II+ N +  + +
Sbjct: 1162 DRGSRMTASIGSAKFLSDGDELVKELQCTADSSIVYSQPQPEDPSSSSIIQDNNIDADAR 1221

Query: 3057 KYSSLQTLSVGRNDHGAQSLGLEDQDFCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPE 3236
            +Y+SLQTLSV R D   + LG E                                   PE
Sbjct: 1222 RYASLQTLSVARFDPDGEPLGKE--------ISARGKEKHKSKEKKRKRESNKGHHDDPE 1273

Query: 3237 YXXXXXXXXXXXXXXXXIMKLQSGNVKLSSTALQSTSFEPGGEFALQTRDLRASFVGLCT 3416
            Y                + KLQS   K SS  + S   EP         D+ A  V   T
Sbjct: 1274 YLERKRLKKEKKRREKELAKLQSDEAKRSSIDMSSKKEEP-------VVDVVARQV---T 1323

Query: 3417 NEEPRVKPAPVELKPNEPGNSEVVSKPLETKGDGLEGSSSVRKIRLKIKDRNLNK 3581
            + EP    + +E+K           K   TK +  EG+S   KIR+KIK+R L+K
Sbjct: 1324 SVEPTGYDSKLEIK-----------KIDTTKPEPSEGTSGAPKIRIKIKNRMLSK 1367


>ref|XP_003549806.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
            isoform 1 [Glycine max]
          Length = 1388

 Score =  870 bits (2249), Expect(2) = 0.0
 Identities = 427/571 (74%), Positives = 482/571 (84%), Gaps = 1/571 (0%)
 Frame = +2

Query: 2    GTLLYQVLSKDDPPRKTFVYSLSVPVAARWISLVVAQFEILVDSHNGIISHMCLSPDILK 181
            G+LLYQVLSKD+PP+KT+VY L VPVAARWISL VA FEIL D    +ISHMC  P++ K
Sbjct: 220  GSLLYQVLSKDNPPQKTYVYKLDVPVAARWISLAVAPFEILPDHQFSLISHMCSLPNLSK 279

Query: 182  LRNTATFFHSAFSHYEDYLSAPFPFGSYKQVFIAPEMTISSLSIGASMSIFSSQVLFDEK 361
            +RNT  FFHSAFS Y+DYLS  FPF SY QVFI PEM +SSLS+GASMS+FSSQVLFDEK
Sbjct: 280  MRNTVDFFHSAFSCYKDYLSVDFPFDSYTQVFIEPEMAVSSLSLGASMSVFSSQVLFDEK 339

Query: 362  VIDQTISTRIKLAYALARQWFGVYISADSPSDEWLLDGLADFLTDSFIKRFLGNNEARYR 541
            VIDQTI TR+KLAYALARQWFGVYI+ ++P+DEWLLDGLA FLTD FIK+ LGNNEARYR
Sbjct: 340  VIDQTIDTRVKLAYALARQWFGVYITPEAPNDEWLLDGLAGFLTDFFIKKHLGNNEARYR 399

Query: 542  RYKENSAVCKADVSGASTLSCSAAT-DLYGTQCLGLSGKIRSWKSVAVLQMLEKQMGPES 718
            RYK N AVCK D  GA+ LSCSA+  DLYGTQC+GL GKIRSWKSVA LQMLEKQMGPES
Sbjct: 400  RYKANCAVCKVDNGGATALSCSASCKDLYGTQCIGLYGKIRSWKSVAALQMLEKQMGPES 459

Query: 719  FRKILQVIILRAQDKTRSLRTLSTKEFRHFSNKVGNLERPFLKEFFPRWVGSCGCPVLRM 898
            FR+ILQ I+ RAQDKTRS++TLSTKEFRHF+NKVGNLERPFLK+FFPRWVGSCGCPVLRM
Sbjct: 460  FRRILQTIVSRAQDKTRSIKTLSTKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPVLRM 519

Query: 899  GLSYNKRKNIIELAVFRGCTAAQNAVSVEHSNNHDSETREGDVGWPGMMSIRVYELDGMY 1078
            G SYNKRKN++ELAV RGCTA Q + +     N D+ETR+GD GWPGMMSIRVYELDGMY
Sbjct: 520  GFSYNKRKNMVELAVLRGCTALQTSNTSILDINPDTETRDGDTGWPGMMSIRVYELDGMY 579

Query: 1079 DHPILPMSGEALQLLEIQCHSRLAAKRIQKPKKGSKLDGSDDNGETPTADLRTNXXXXXX 1258
            DHPILPM+G+A QLLEIQCHS+LAA+R QKPKKG KLDGSDDNG+ P+ D+R+N      
Sbjct: 580  DHPILPMAGDAWQLLEIQCHSKLAARRFQKPKKGLKLDGSDDNGDVPSMDMRSN------ 633

Query: 1259 XXXXXXXXXXXXXXXXXXXXAESPLLWLRADPQMEYLAKIHFNQPIQMWINQLEKDRDVV 1438
                                 ESPLLW+RADP MEYLA++HFNQP+QMWINQLEKD+DV+
Sbjct: 634  --------------------TESPLLWIRADPDMEYLAEVHFNQPVQMWINQLEKDKDVI 673

Query: 1439 AQAQAIATLEALPQLSFSVVNALYNFLSDSKAFWRVRIEAAFALANTASEDTDWAGLLHL 1618
            AQAQAIA LEA PQLSFS+VNAL NFLSDSKAFWRVRIEAAFALAN+ASE+TD++GLLHL
Sbjct: 674  AQAQAIAALEASPQLSFSIVNALNNFLSDSKAFWRVRIEAAFALANSASEETDFSGLLHL 733

Query: 1619 VKFYKSRRFDETMGLPRPNDFHDFPEYFVLE 1711
            +KFYKSRRFD  +GLP+PNDFHDF EYFVLE
Sbjct: 734  MKFYKSRRFDTDIGLPKPNDFHDFAEYFVLE 764



 Score =  463 bits (1192), Expect(2) = 0.0
 Identities = 312/655 (47%), Positives = 376/655 (57%), Gaps = 47/655 (7%)
 Frame = +3

Query: 1758 EAIPHAIAMVRAADKKSPREAVEFLLQLLKYNDNNGNPYSDVYWLAALVQSIGELEFGQQ 1937
            EAIPHA+AMVRAADKKSPREA+EF+LQLLKYNDNNGNPYSDV+WLAALVQS+GELEFGQQ
Sbjct: 764  EAIPHAVAMVRAADKKSPREAIEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQ 823

Query: 1938 N-KLLSSLLKRIDRLLQFERLMPSYNGILTISCIRSLTQTALKLSASIPLDRVSELIKPF 2114
            +  LLSSLLKRIDRLLQF+ LMPSYNGILTISCIR+LTQ ALKLS  IPLDRV  L+KPF
Sbjct: 824  SILLLSSLLKRIDRLLQFDSLMPSYNGILTISCIRTLTQIALKLSGFIPLDRVYGLVKPF 883

Query: 2115 RDFGTLWKVRIEASRALLDLEFQCNGIDAALILFTRYLEEEASLRGQVKLSLHAMRLCQI 2294
            RD   LW+VRIEASRALLDLEF C G+D+AL+LF +Y+EEE SLRGQ+KL+ H MRLCQ+
Sbjct: 884  RDIKALWQVRIEASRALLDLEFHCKGMDSALLLFIKYIEEEHSLRGQLKLATHVMRLCQM 943

Query: 2295 K----GEDVIKASTXXXXXXXXEGRKAFNNVLLRHHLFCLFQILSGRPSTLYGIPR---- 2450
            +      D I + T        EGR AFNN  LRH+LFC+ QIL+ R  TL+GIPR    
Sbjct: 944  RDGLNSNDEITSQTLVSMLNLLEGRIAFNNAFLRHYLFCILQILARRHPTLHGIPRENRM 1003

Query: 2451 ---TQVQPSGEPK---TCSEQIKTAFLKLKISRPSEPLGDAQNLLPDAL-PIPEDS---- 2597
               +  + S   K       + K   L   I   ++ LG     L DAL   P+D     
Sbjct: 1004 LHMSLTEASNYQKNMLALDSESKPLDLPSSIDDLTQNLGPTMEGLRDALDEAPKDQPCEA 1063

Query: 2598 ---------KEA---------------IPIP---EASKEADTVSNGSERKRAVLKIKVKQ 2696
                     KEA                PI    E SKEADTVSN  ERKR + KIKVKQ
Sbjct: 1064 PTQVHLEALKEASLEKPKEVFTEFPQEAPIEAPNEISKEADTVSNSHERKRPI-KIKVKQ 1122

Query: 2697 XXXXXXXXXXXKVVVNISDGVQDEAERGGSSSMSVDAPVRVTSEPLNADCQIIEEVNSCH 2876
                       +VV   S G ++E + G SSS+SVDAP R  +E ++     I+EVNS H
Sbjct: 1123 SSATSRADTDNQVVER-SLGGRNEMDHGASSSVSVDAPQRNFAETVSISNHNIDEVNSWH 1181

Query: 2877 DRDSRITASIGSVKPVNNLDENRNELQCTADSSTVDCQLQPEDRSLPNIIKGNGVGPETQ 3056
            DR SR+TASIGS K +++ DE   ELQCTADSS V  Q QPED S  +II+ N +  + +
Sbjct: 1182 DRGSRMTASIGSAKFLSDGDELVKELQCTADSSIVYSQPQPEDPSSSSIIQDNNIDADAR 1241

Query: 3057 KYSSLQTLSVGRNDHGAQSLGLEDQDFCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPE 3236
            +Y+SLQTLSV R D   + LG E                                   PE
Sbjct: 1242 RYASLQTLSVARFDPDGEPLGKE--------ISARGKEKHKSKEKKRKRESNKGHHDDPE 1293

Query: 3237 YXXXXXXXXXXXXXXXXIMKLQSGNVKLSSTALQSTSFEPGGEFALQTRDLRASFVGLCT 3416
            Y                + KLQS   K SS  + S   EP         D+ A  V   T
Sbjct: 1294 YLERKRLKKEKKRREKELAKLQSDEAKRSSIDMSSKKEEP-------VVDVVARQV---T 1343

Query: 3417 NEEPRVKPAPVELKPNEPGNSEVVSKPLETKGDGLEGSSSVRKIRLKIKDRNLNK 3581
            + EP    + +E+K           K   TK +  EG+S   KIR+KIK+R L+K
Sbjct: 1344 SVEPTGYDSKLEIK-----------KIDTTKPEPSEGTSGAPKIRIKIKNRMLSK 1387


>ref|XP_003525647.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
            [Glycine max]
          Length = 1388

 Score =  867 bits (2241), Expect(2) = 0.0
 Identities = 426/571 (74%), Positives = 479/571 (83%), Gaps = 1/571 (0%)
 Frame = +2

Query: 2    GTLLYQVLSKDDPPRKTFVYSLSVPVAARWISLVVAQFEILVDSHNGIISHMCLSPDILK 181
            G+LLYQVLSKD+PPRKT+ Y L VPVAARWISL VA FE+  D    +ISHMC  P++ K
Sbjct: 220  GSLLYQVLSKDNPPRKTYFYKLDVPVAARWISLAVAPFEVFPDHQFSLISHMCSPPNLSK 279

Query: 182  LRNTATFFHSAFSHYEDYLSAPFPFGSYKQVFIAPEMTISSLSIGASMSIFSSQVLFDEK 361
            +RNT  FFHSAFS Y+D+LS  FPF SY QVFI PEM +SSLS+GASMSIFSSQVLFDEK
Sbjct: 280  MRNTVDFFHSAFSCYKDFLSVDFPFDSYTQVFIEPEMAVSSLSLGASMSIFSSQVLFDEK 339

Query: 362  VIDQTISTRIKLAYALARQWFGVYISADSPSDEWLLDGLADFLTDSFIKRFLGNNEARYR 541
            VIDQTI TR+KLAYALARQWFGVYI+ ++P+DEWLLDGLA FLTD FIK+ LGNNEARYR
Sbjct: 340  VIDQTIDTRVKLAYALARQWFGVYITPEAPNDEWLLDGLAGFLTDFFIKKHLGNNEARYR 399

Query: 542  RYKENSAVCKADVSGASTLSCSAAT-DLYGTQCLGLSGKIRSWKSVAVLQMLEKQMGPES 718
            RYKEN AVCK D  GA+ LSCSA+  DLYGTQC+GL GKIRSWKSVAVLQMLEKQMGPES
Sbjct: 400  RYKENCAVCKVDNDGATALSCSASCKDLYGTQCIGLYGKIRSWKSVAVLQMLEKQMGPES 459

Query: 719  FRKILQVIILRAQDKTRSLRTLSTKEFRHFSNKVGNLERPFLKEFFPRWVGSCGCPVLRM 898
            FR+ILQ I+ RAQDKTRS++TLSTKEFRHF+NKVGNLERPFLK+FFPRWV SCGCPVLRM
Sbjct: 460  FRRILQTIVSRAQDKTRSIKTLSTKEFRHFANKVGNLERPFLKDFFPRWVSSCGCPVLRM 519

Query: 899  GLSYNKRKNIIELAVFRGCTAAQNAVSVEHSNNHDSETREGDVGWPGMMSIRVYELDGMY 1078
            G SYNKRKN++ELAV RGCT  Q + +     N D+ETR+GD+GWPGMMSIRVYELDGMY
Sbjct: 520  GFSYNKRKNMVELAVLRGCTTLQTSSTSILDINPDTETRDGDIGWPGMMSIRVYELDGMY 579

Query: 1079 DHPILPMSGEALQLLEIQCHSRLAAKRIQKPKKGSKLDGSDDNGETPTADLRTNXXXXXX 1258
            DHPILPM+GEA QLLEIQCHS+LAA+R QKPKKG KLDGSDDNG+ P+ D+R N      
Sbjct: 580  DHPILPMAGEAWQLLEIQCHSKLAARRFQKPKKGLKLDGSDDNGDVPSMDMRLN------ 633

Query: 1259 XXXXXXXXXXXXXXXXXXXXAESPLLWLRADPQMEYLAKIHFNQPIQMWINQLEKDRDVV 1438
                                 ESPLLW+RADP MEYLA++HFNQP+QMWINQLEKD+DV+
Sbjct: 634  --------------------TESPLLWIRADPDMEYLAEVHFNQPVQMWINQLEKDKDVI 673

Query: 1439 AQAQAIATLEALPQLSFSVVNALYNFLSDSKAFWRVRIEAAFALANTASEDTDWAGLLHL 1618
            AQAQAIA LEA PQLSFS+VNAL NFLSDSKAFWRVRIEAAFALAN+ASE+TD++GLLHL
Sbjct: 674  AQAQAIAALEASPQLSFSIVNALNNFLSDSKAFWRVRIEAAFALANSASEETDFSGLLHL 733

Query: 1619 VKFYKSRRFDETMGLPRPNDFHDFPEYFVLE 1711
            VKFYKSRRFD  +GLP+PNDF DF EYFVLE
Sbjct: 734  VKFYKSRRFDPDIGLPKPNDFQDFAEYFVLE 764



 Score =  475 bits (1223), Expect(2) = 0.0
 Identities = 306/658 (46%), Positives = 377/658 (57%), Gaps = 50/658 (7%)
 Frame = +3

Query: 1758 EAIPHAIAMVRAADKKSPREAVEFLLQLLKYNDNNGNPYSDVYWLAALVQSIGELEFGQQ 1937
            EAIPHA+AMVRAADKKSPREA+EF+LQLLKYNDNNGNPYSDV+WLAALVQS+GELEFGQQ
Sbjct: 764  EAIPHAVAMVRAADKKSPREAIEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQ 823

Query: 1938 N-KLLSSLLKRIDRLLQFERLMPSYNGILTISCIRSLTQTALKLSASIPLDRVSELIKPF 2114
            +  LLSSLLKRIDRLLQF+ LMPSYNGILTISCIR+LTQ ALKLS  IPLDRV EL+KPF
Sbjct: 824  SILLLSSLLKRIDRLLQFDSLMPSYNGILTISCIRTLTQIALKLSGFIPLDRVYELVKPF 883

Query: 2115 RDFGTLWKVRIEASRALLDLEFQCNGIDAALILFTRYLEEEASLRGQVKLSLHAMRLCQI 2294
            RD   LW+V+IEAS+ALLDLEF C G+D+AL+LF +Y+EEE SLRGQ+KL+ H MRLCQ+
Sbjct: 884  RDLKALWQVQIEASKALLDLEFHCKGMDSALLLFIKYIEEEHSLRGQLKLATHVMRLCQM 943

Query: 2295 K----GEDVIKASTXXXXXXXXEGRKAFNNVLLRHHLFCLFQILSGRPSTLYGIPR-TQV 2459
            +      D I + T        EGR AFNNV LRH+LFC+ QIL+ RP TL+GIPR  ++
Sbjct: 944  RDGLNSNDEITSQTLVSMLNLLEGRIAFNNVSLRHYLFCILQILARRPPTLHGIPRGNRM 1003

Query: 2460 QPSGEPKTCSEQIKTAFLKLKISRPSEPLGDAQNLLPDALPIPEDSKEAI---------- 2609
                  + C+ Q K  F     S+P +     +NL  +  P  E  ++A+          
Sbjct: 1004 LHMSLAEACNYQ-KNIFALDSESKPLDLPSSTKNLTQNLGPTMEGLRDAVDEAPKDQPCE 1062

Query: 2610 ---------------------------------PIP-EASKEADTVSNGSERKRAVLKIK 2687
                                             P P E SKE DTVSN  ERKR + KIK
Sbjct: 1063 ASTQVHLEALKEASLEKPKEVFTEFPQEAPIEAPNPNEVSKEVDTVSNSHERKRPI-KIK 1121

Query: 2688 VKQXXXXXXXXXXXKVVVNISDGVQDEAERGGSSSMSVDAPVRVTSEPLNADCQIIEEVN 2867
            VKQ           + VV  S G ++E + G SSS+SVDAP R  +E ++     I+EVN
Sbjct: 1122 VKQSSATSRADTDNQ-VVECSLGGRNEMDHGASSSVSVDAPQRNFAETVSISNHNIDEVN 1180

Query: 2868 SCHDRDSRITASIGSVKPVNNLDENRNELQCTADSSTVDCQLQPEDRSLPNIIKGNGVGP 3047
            S HDR SR+TASIGS K +++ DE   ELQCTADSS V  Q QPED S  +II+ N +  
Sbjct: 1181 SWHDRGSRMTASIGSAKFLSDGDELVKELQCTADSSIVYSQPQPEDPSSSSIIQDNNIDA 1240

Query: 3048 ETQKYSSLQTLSVGRNDHGAQSLGLEDQDFCXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 3227
            + ++Y+SLQTLSV R D   +SLG E                                  
Sbjct: 1241 DARRYASLQTLSVARFDPDGESLGKE--------ISARGKEKHKSKEKKRKQESNKGHHD 1292

Query: 3228 XPEYXXXXXXXXXXXXXXXXIMKLQSGNVKLSSTALQSTSFEPGGEFALQTRDLRASFVG 3407
              EY                + KLQS   K SS  L S   EP  + A Q + +  S   
Sbjct: 1293 DVEYLERKRLKKEKKHREKELAKLQSDEAKRSSIDLSSKKVEPVVDVARQVKSVEPSGY- 1351

Query: 3408 LCTNEEPRVKPAPVELKPNEPGNSEVVSKPLETKGDGLEGSSSVRKIRLKIKDRNLNK 3581
                                  NS+V  K ++TK +  EG+S   KIR+KIK+R L+K
Sbjct: 1352 ----------------------NSKVEIKKIDTKPEPSEGTSGAPKIRIKIKNRMLSK 1387