BLASTX nr result

ID: Coptis25_contig00009394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009394
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550122.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   162   2e-38
ref|XP_003529693.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   162   2e-38
ref|XP_002865759.1| EMB1879 [Arabidopsis lyrata subsp. lyrata] g...   162   2e-38
ref|NP_568713.1| uncharacterized protein [Arabidopsis thaliana] ...   162   2e-38
dbj|BAA98149.1| unnamed protein product [Arabidopsis thaliana]        162   2e-38

>ref|XP_003550122.1| PREDICTED: UPF0420 protein C16orf58 homolog [Glycine max]
          Length = 497

 Score =  162 bits (411), Expect = 2e-38
 Identities = 82/98 (83%), Positives = 84/98 (85%)
 Frame = +2

Query: 2   GRIGKMLFARQGKKFDYDLKQLRFSGDLLMELGAGVELATALVPHLFLPLXXXXXXXXXX 181
           GR+GKMLFARQGKKFDYDLKQLRF+GDLLMELGAGVELATA VPHLFLPL          
Sbjct: 175 GRVGKMLFARQGKKFDYDLKQLRFAGDLLMELGAGVELATAAVPHLFLPLACAANVLKNV 234

Query: 182 XXXTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADL 295
              TSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADL
Sbjct: 235 AAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADL 272


>ref|XP_003529693.1| PREDICTED: UPF0420 protein C16orf58 homolog [Glycine max]
          Length = 488

 Score =  162 bits (411), Expect = 2e-38
 Identities = 82/98 (83%), Positives = 84/98 (85%)
 Frame = +2

Query: 2   GRIGKMLFARQGKKFDYDLKQLRFSGDLLMELGAGVELATALVPHLFLPLXXXXXXXXXX 181
           GR+GKMLFARQGKKFDYDLKQLRF+GDLLMELGAGVELATA VPHLFLPL          
Sbjct: 167 GRVGKMLFARQGKKFDYDLKQLRFTGDLLMELGAGVELATAAVPHLFLPLACAANVLKNV 226

Query: 182 XXXTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADL 295
              TSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADL
Sbjct: 227 AAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADL 264


>ref|XP_002865759.1| EMB1879 [Arabidopsis lyrata subsp. lyrata]
           gi|297311594|gb|EFH42018.1| EMB1879 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 499

 Score =  162 bits (411), Expect = 2e-38
 Identities = 82/98 (83%), Positives = 84/98 (85%)
 Frame = +2

Query: 2   GRIGKMLFARQGKKFDYDLKQLRFSGDLLMELGAGVELATALVPHLFLPLXXXXXXXXXX 181
           GR+GKMLFARQGKKFDYDLKQLRF+GDLLMELGAGVELATA VPHLFLPL          
Sbjct: 180 GRVGKMLFARQGKKFDYDLKQLRFAGDLLMELGAGVELATAAVPHLFLPLACAANVVKNV 239

Query: 182 XXXTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADL 295
              TSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADL
Sbjct: 240 AAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADL 277


>ref|NP_568713.1| uncharacterized protein [Arabidopsis thaliana]
           gi|16604643|gb|AAL24114.1| unknown protein [Arabidopsis
           thaliana] gi|23296703|gb|AAN13151.1| unknown protein
           [Arabidopsis thaliana] gi|332008476|gb|AED95859.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 497

 Score =  162 bits (411), Expect = 2e-38
 Identities = 82/98 (83%), Positives = 84/98 (85%)
 Frame = +2

Query: 2   GRIGKMLFARQGKKFDYDLKQLRFSGDLLMELGAGVELATALVPHLFLPLXXXXXXXXXX 181
           GR+GKMLFARQGKKFDYDLKQLRF+GDLLMELGAGVELATA VPHLFLPL          
Sbjct: 177 GRVGKMLFARQGKKFDYDLKQLRFAGDLLMELGAGVELATAAVPHLFLPLACAANVVKNV 236

Query: 182 XXXTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADL 295
              TSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADL
Sbjct: 237 AAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADL 274


>dbj|BAA98149.1| unnamed protein product [Arabidopsis thaliana]
          Length = 407

 Score =  162 bits (411), Expect = 2e-38
 Identities = 82/98 (83%), Positives = 84/98 (85%)
 Frame = +2

Query: 2   GRIGKMLFARQGKKFDYDLKQLRFSGDLLMELGAGVELATALVPHLFLPLXXXXXXXXXX 181
           GR+GKMLFARQGKKFDYDLKQLRF+GDLLMELGAGVELATA VPHLFLPL          
Sbjct: 87  GRVGKMLFARQGKKFDYDLKQLRFAGDLLMELGAGVELATAAVPHLFLPLACAANVVKNV 146

Query: 182 XXXTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADL 295
              TSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADL
Sbjct: 147 AAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNIADL 184


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