BLASTX nr result

ID: Coptis25_contig00009382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009382
         (811 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134182.1| PREDICTED: vesicle-associated protein 2-2-li...   103   2e-20
ref|XP_002266266.1| PREDICTED: vesicle-associated protein 2-2 [V...   102   4e-20
gb|ACJ84910.1| unknown [Medicago truncatula] gi|388496266|gb|AFK...   102   8e-20
ref|NP_001239873.1| uncharacterized protein LOC100794670 [Glycin...   100   3e-19
ref|XP_002302473.1| predicted protein [Populus trichocarpa] gi|2...   100   3e-19

>ref|XP_004134182.1| PREDICTED: vesicle-associated protein 2-2-like [Cucumis sativus]
           gi|449495402|ref|XP_004159830.1| PREDICTED:
           vesicle-associated protein 2-2-like [Cucumis sativus]
          Length = 340

 Score =  103 bits (258), Expect(2) = 2e-20
 Identities = 51/81 (62%), Positives = 63/81 (77%), Gaps = 10/81 (12%)
 Frame = -1

Query: 214 KSTCDFTVTMQAQKVAPTDLQCKDKFLIQGTIVSYGTTEEDITPDMFAKDSRRYIDENKL 35
           K+TCDFTVTM AQ+ AP D+QCKDKFL+QGT++S GT+EEDIT D+FAKDS ++I+E KL
Sbjct: 61  KNTCDFTVTMLAQRTAPPDMQCKDKFLVQGTVISPGTSEEDITSDVFAKDSGKHIEEKKL 120

Query: 34  K----------VVLPINGALK 2
           K          V+LPING LK
Sbjct: 121 KVFLASATPTPVLLPINGELK 141



 Score = 21.6 bits (44), Expect(2) = 2e-20
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -2

Query: 234 EKYCVRPN 211
           +KYCVRPN
Sbjct: 47  KKYCVRPN 54


>ref|XP_002266266.1| PREDICTED: vesicle-associated protein 2-2 [Vitis vinifera]
           gi|298204983|emb|CBI34290.3| unnamed protein product
           [Vitis vinifera]
          Length = 336

 Score =  102 bits (254), Expect(2) = 4e-20
 Identities = 51/79 (64%), Positives = 61/79 (77%), Gaps = 10/79 (12%)
 Frame = -1

Query: 211 STCDFTVTMQAQKVAPTDLQCKDKFLIQGTIVSYGTTEEDITPDMFAKDSRRYIDENKLK 32
           STCDFTVTMQAQ+ AP D+ CKDKFL+Q TIV  GT++EDITP MF+KDS +YI+ENKL+
Sbjct: 62  STCDFTVTMQAQRSAPPDMICKDKFLVQSTIVPAGTSDEDITPGMFSKDSGKYIEENKLR 121

Query: 31  VVL----------PINGAL 5
           V+L          PINGAL
Sbjct: 122 VILISPPNSPVLSPINGAL 140



 Score = 21.9 bits (45), Expect(2) = 4e-20
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 234 EKYCVRPNQHV 202
           +KYCVRPN  V
Sbjct: 47  KKYCVRPNTGV 57


>gb|ACJ84910.1| unknown [Medicago truncatula] gi|388496266|gb|AFK36199.1| unknown
           [Medicago truncatula]
          Length = 188

 Score =  102 bits (255), Expect = 8e-20
 Identities = 49/70 (70%), Positives = 60/70 (85%)
 Frame = -1

Query: 793 MASDDTQKSHRTRPRSHKSVGSSQKALSGSLSYDSQSKGSVSPAQSGTKVDLSKLQMTAL 614
           MASDDTQKS+R+RPR H+S+GSS +++S S S DSQSKGS+S  Q  TKVDLSKL+M+AL
Sbjct: 111 MASDDTQKSYRSRPRMHRSLGSSHRSMSRSFSVDSQSKGSISMPQGWTKVDLSKLEMSAL 170

Query: 613 RRYWRHFNLL 584
            RYWRHFNL+
Sbjct: 171 WRYWRHFNLV 180


>ref|NP_001239873.1| uncharacterized protein LOC100794670 [Glycine max]
           gi|255634614|gb|ACU17669.1| unknown [Glycine max]
          Length = 295

 Score =  100 bits (248), Expect(2) = 3e-19
 Identities = 48/78 (61%), Positives = 60/78 (76%), Gaps = 10/78 (12%)
 Frame = -1

Query: 205 CDFTVTMQAQKVAPTDLQCKDKFLIQGTIVSYGTTEEDITPDMFAKDSRRYIDENKLKVV 26
           CDFTVTMQAQ++AP D+ CKDKFLIQ T+V +GTTE+DIT DMF+KDS +YI+E KL+VV
Sbjct: 64  CDFTVTMQAQRMAPPDMLCKDKFLIQSTVVPFGTTEDDITSDMFSKDSGKYIEEKKLRVV 123

Query: 25  ----------LPINGALK 2
                     LP+NG +K
Sbjct: 124 LISPPSSPVLLPVNGDMK 141



 Score = 21.6 bits (44), Expect(2) = 3e-19
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -2

Query: 234 EKYCVRPN 211
           +KYCVRPN
Sbjct: 47  KKYCVRPN 54


>ref|XP_002302473.1| predicted protein [Populus trichocarpa] gi|222844199|gb|EEE81746.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score =  100 bits (250), Expect = 3e-19
 Identities = 50/75 (66%), Positives = 60/75 (80%)
 Frame = -1

Query: 793 MASDDTQKSHRTRPRSHKSVGSSQKALSGSLSYDSQSKGSVSPAQSGTKVDLSKLQMTAL 614
           MASDDTQKSHR+R R+HKS GSS K +S SLS DSQSKGS+S  +   KVDLSKL++ AL
Sbjct: 110 MASDDTQKSHRSRNRTHKSTGSSHKTMSRSLSCDSQSKGSISTPRGTAKVDLSKLEVAAL 169

Query: 613 RRYWRHFNLLFNGPS 569
            RYWRHFNL+ + P+
Sbjct: 170 WRYWRHFNLVDSIPN 184


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