BLASTX nr result
ID: Coptis25_contig00009381
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00009381 (246 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004162895.1| PREDICTED: uncharacterized LOC101222348 isof... 78 8e-13 ref|XP_004148806.1| PREDICTED: uncharacterized protein LOC101222... 78 8e-13 gb|ACU23298.1| unknown [Glycine max] 74 9e-12 gb|AFK44959.1| unknown [Lotus japonicus] 69 5e-10 ref|XP_003592142.1| RNA-binding protein with multiple splicing [... 68 9e-10 >ref|XP_004162895.1| PREDICTED: uncharacterized LOC101222348 isoform 1 [Cucumis sativus] gi|449506964|ref|XP_004162896.1| PREDICTED: uncharacterized LOC101222348 isoform 2 [Cucumis sativus] Length = 257 Score = 77.8 bits (190), Expect = 8e-13 Identities = 34/61 (55%), Positives = 45/61 (73%) Frame = +3 Query: 63 EPSLMGAPRSVGSDMLPNGRGVMGFNGQLPADTMGKPGREGLPLPPDATNTLYIEGLPPD 242 +P +M P +V D+ PNGR + + LP D+M +PGRE +PLPPDA+NTLY+EGLPPD Sbjct: 110 DPIVMSRPPAVSPDLAPNGRN-LEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPD 168 Query: 243 S 245 S Sbjct: 169 S 169 >ref|XP_004148806.1| PREDICTED: uncharacterized protein LOC101222348 isoform 1 [Cucumis sativus] gi|449462156|ref|XP_004148807.1| PREDICTED: uncharacterized protein LOC101222348 isoform 2 [Cucumis sativus] Length = 257 Score = 77.8 bits (190), Expect = 8e-13 Identities = 34/61 (55%), Positives = 45/61 (73%) Frame = +3 Query: 63 EPSLMGAPRSVGSDMLPNGRGVMGFNGQLPADTMGKPGREGLPLPPDATNTLYIEGLPPD 242 +P +M P +V D+ PNGR + + LP D+M +PGRE +PLPPDA+NTLY+EGLPPD Sbjct: 110 DPIVMSRPPAVSPDLAPNGRN-LEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPD 168 Query: 243 S 245 S Sbjct: 169 S 169 >gb|ACU23298.1| unknown [Glycine max] Length = 242 Score = 74.3 bits (181), Expect = 9e-12 Identities = 34/63 (53%), Positives = 45/63 (71%) Frame = +3 Query: 57 MGEPSLMGAPRSVGSDMLPNGRGVMGFNGQLPADTMGKPGREGLPLPPDATNTLYIEGLP 236 + +PS+MG G D+ PNGRGV + GQLP D + +PG E + LPPDA++TLY+EGLP Sbjct: 93 LADPSVMGRHGGGGPDLAPNGRGV-NYGGQLPVDAVSRPGPETVSLPPDASSTLYVEGLP 151 Query: 237 PDS 245 DS Sbjct: 152 SDS 154 >gb|AFK44959.1| unknown [Lotus japonicus] Length = 239 Score = 68.6 bits (166), Expect = 5e-10 Identities = 31/63 (49%), Positives = 43/63 (68%) Frame = +3 Query: 57 MGEPSLMGAPRSVGSDMLPNGRGVMGFNGQLPADTMGKPGREGLPLPPDATNTLYIEGLP 236 + + + MG G D+ PNGRG + GQ P D++ +PG E +PLPPDA++TLY+EGLP Sbjct: 90 LADHAAMGRHGGGGPDIAPNGRG-FNYGGQPPVDSVSRPGHETVPLPPDASSTLYVEGLP 148 Query: 237 PDS 245 DS Sbjct: 149 SDS 151 >ref|XP_003592142.1| RNA-binding protein with multiple splicing [Medicago truncatula] gi|355481190|gb|AES62393.1| RNA-binding protein with multiple splicing [Medicago truncatula] Length = 252 Score = 67.8 bits (164), Expect = 9e-10 Identities = 35/65 (53%), Positives = 44/65 (67%), Gaps = 2/65 (3%) Frame = +3 Query: 57 MGEPSLMGAPRSVGS--DMLPNGRGVMGFNGQLPADTMGKPGREGLPLPPDATNTLYIEG 230 +G+PS MG VG D+ NGR V F GQLP D + +PG E +PLP DA++TLY+EG Sbjct: 100 LGDPSAMGHLSGVGGGPDLSRNGRDV-NFGGQLPIDAVSRPGPETIPLPRDASSTLYVEG 158 Query: 231 LPPDS 245 LP DS Sbjct: 159 LPSDS 163