BLASTX nr result

ID: Coptis25_contig00009374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009374
         (1486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74163.1| hypothetical protein VITISV_026443 [Vitis vinifera]   499   e-139
ref|XP_002285110.1| PREDICTED: U-box domain-containing protein 2...   497   e-138
ref|XP_003529402.1| PREDICTED: U-box domain-containing protein 2...   478   e-132
ref|XP_002313124.1| predicted protein [Populus trichocarpa] gi|1...   478   e-132
ref|XP_003607940.1| U-box domain-containing protein [Medicago tr...   477   e-132

>emb|CAN74163.1| hypothetical protein VITISV_026443 [Vitis vinifera]
          Length = 476

 Score =  499 bits (1285), Expect = e-139
 Identities = 266/422 (63%), Positives = 301/422 (71%), Gaps = 2/422 (0%)
 Frame = +1

Query: 115  STKHRQEMKGCLESIDVGVQIPFHFRCPISLELMRDPVTVSTGQTYDRCSIESWVATGNS 294
            + + +++M G LE +DVGVQIP+HFRCPISLELM DPVTVSTGQTYDR SIE WV TGN+
Sbjct: 55   AVERKKKMPGSLEPLDVGVQIPYHFRCPISLELMCDPVTVSTGQTYDRASIEYWVGTGNT 114

Query: 295  TCPVTRVPLSDFNLIPNHTLRRLIQEWCVNNRSLGVERIPTPKQPADPTLVRXXXXXXXX 474
            TCPVTR  L+DF LIPNHTLRRLIQ+WCV NRS GVERIPTPKQPADP  VR        
Sbjct: 115  TCPVTRSSLTDFTLIPNHTLRRLIQDWCVANRSFGVERIPTPKQPADPASVRSLQTQVSS 174

Query: 475  XXXXXXXXXXXXXXXXXXXXDSEKNRSIISSNNPVNFLLPIVFSXXXXXXXXXXXXXX-- 648
                                DS+KNRSII S+N    LLP++FS                
Sbjct: 175  QSNPSHTRLSAVKRLRGLARDSDKNRSIIGSHNVQEVLLPVIFSDSECDSAELKHESLAL 234

Query: 649  VVMFSLTEHHCXXXXXXXXXXXXXXXXLTQPNIEVRVNSASLIEMVVSGTRSLEERAAIG 828
            +VMF L+E  C                L   +IEVRVNSA+LIE+VV+GTRSL+ RA I 
Sbjct: 235  LVMFPLSESECAFVASQPDRVAHLVSLLFHASIEVRVNSAALIEIVVAGTRSLDLRAQIS 294

Query: 829  SLDGLFEGITQILNYPFSYPRALKVGIKALFALCLVKQNRSKAVSAGAAGALIDRLADFE 1008
            ++D +FEGIT ILNYP +YPRALKVGIKALFALCL KQ+R KAV+AGA  ALIDRLADFE
Sbjct: 295  NVDEIFEGITGILNYPLAYPRALKVGIKALFALCLAKQSRHKAVAAGAVTALIDRLADFE 354

Query: 1009 KCDAERALATIELLCRTPMGCSAFAAHALTVPLLVKIILKISDRATEYAAGALLSLCSGW 1188
            KCD ERALAT+ELLCR P GC+AFAAHALTVPLLV+ ILK+SDRATEYAAGALLSLCS  
Sbjct: 355  KCDVERALATVELLCRVPAGCAAFAAHALTVPLLVRKILKVSDRATEYAAGALLSLCSAA 414

Query: 1189 EELQRDAVAAGVVTQLLLLVQSDCTEXXXXXXXXXXXXXXDSWPDDSVGNSDDFRGSDVV 1368
            E+ QR+AV+AGVVTQLLLLVQSDCTE              DSWP+DSV NSDDF  SDVV
Sbjct: 415  EQSQREAVSAGVVTQLLLLVQSDCTERAKRKAQLLLKLLRDSWPEDSVVNSDDFGCSDVV 474

Query: 1369 PF 1374
            PF
Sbjct: 475  PF 476


>ref|XP_002285110.1| PREDICTED: U-box domain-containing protein 26 [Vitis vinifera]
          Length = 415

 Score =  497 bits (1279), Expect = e-138
 Identities = 266/415 (64%), Positives = 296/415 (71%), Gaps = 2/415 (0%)
 Frame = +1

Query: 136  MKGCLESIDVGVQIPFHFRCPISLELMRDPVTVSTGQTYDRCSIESWVATGNSTCPVTRV 315
            M G LE +DVGVQIP+HFRCPISLELM DPVTVSTGQTYDR SIE WV TGN+TCPVTR 
Sbjct: 1    MPGSLEPLDVGVQIPYHFRCPISLELMCDPVTVSTGQTYDRASIEYWVGTGNTTCPVTRS 60

Query: 316  PLSDFNLIPNHTLRRLIQEWCVNNRSLGVERIPTPKQPADPTLVRXXXXXXXXXXXXXXX 495
             L+DF LIPNHTLRRLIQ+WCV NRS GVERIPTPKQPADP  VR               
Sbjct: 61   SLTDFTLIPNHTLRRLIQDWCVANRSFGVERIPTPKQPADPASVRSLQTQVSSQSNPSHT 120

Query: 496  XXXXXXXXXXXXXDSEKNRSIISSNNPVNFLLPIVFSXXXXXXXXXXXXXX--VVMFSLT 669
                         DS+KNRSII S+N    LLP++FS                +VMF L+
Sbjct: 121  RLSAVKRLRGLARDSDKNRSIIGSHNVQEVLLPVIFSDSECDSAELKHESLALLVMFPLS 180

Query: 670  EHHCXXXXXXXXXXXXXXXXLTQPNIEVRVNSASLIEMVVSGTRSLEERAAIGSLDGLFE 849
            E  C                L   +IEVRVNSA+LIE+VV+GTRSL+ RA I ++D +FE
Sbjct: 181  ESECAFVASQPDRVAHLVSLLFHASIEVRVNSAALIEIVVAGTRSLDLRAQISNVDEIFE 240

Query: 850  GITQILNYPFSYPRALKVGIKALFALCLVKQNRSKAVSAGAAGALIDRLADFEKCDAERA 1029
            GIT ILNYP +YPRALKVGIKALFALCL KQ+R KAV+AGA  ALIDRLADFEKCD ERA
Sbjct: 241  GITGILNYPLAYPRALKVGIKALFALCLAKQSRHKAVAAGAVTALIDRLADFEKCDVERA 300

Query: 1030 LATIELLCRTPMGCSAFAAHALTVPLLVKIILKISDRATEYAAGALLSLCSGWEELQRDA 1209
            LAT+ELLCR P GC+AFAAHALTVPLLV+ ILK+SDRATEYAAGALLSLCS  E+ QR+A
Sbjct: 301  LATVELLCRVPAGCAAFAAHALTVPLLVRKILKVSDRATEYAAGALLSLCSAAEQSQREA 360

Query: 1210 VAAGVVTQLLLLVQSDCTEXXXXXXXXXXXXXXDSWPDDSVGNSDDFRGSDVVPF 1374
            V+AGVVTQLLLLVQSDCTE              DSWP+DSV NSDDF  SDVVPF
Sbjct: 361  VSAGVVTQLLLLVQSDCTERAKRKAQLLLKLLRDSWPEDSVVNSDDFGCSDVVPF 415


>ref|XP_003529402.1| PREDICTED: U-box domain-containing protein 26-like [Glycine max]
          Length = 414

 Score =  478 bits (1230), Expect = e-132
 Identities = 252/411 (61%), Positives = 288/411 (70%)
 Frame = +1

Query: 136  MKGCLESIDVGVQIPFHFRCPISLELMRDPVTVSTGQTYDRCSIESWVATGNSTCPVTRV 315
            M G LE +D+GV IP+HFRCPISLELMRDPVTV TGQTYDR SIESWV+TGN+TCPVTR 
Sbjct: 1    MPGSLEPLDLGVHIPYHFRCPISLELMRDPVTVCTGQTYDRASIESWVSTGNTTCPVTRA 60

Query: 316  PLSDFNLIPNHTLRRLIQEWCVNNRSLGVERIPTPKQPADPTLVRXXXXXXXXXXXXXXX 495
             LSDF LIPNHTLRRLIQEWCV NR+ GVERIPTPKQPADP LVR               
Sbjct: 61   TLSDFTLIPNHTLRRLIQEWCVANRAFGVERIPTPKQPADPALVRSLLNQASSDSAPAHL 120

Query: 496  XXXXXXXXXXXXXDSEKNRSIISSNNPVNFLLPIVFSXXXXXXXXXXXXXXVVMFSLTEH 675
                         DS+KNRS+I+S+N +  LLPIVF+              +VMF L E 
Sbjct: 121  RLSSLRRLRQLARDSDKNRSLIASHNLLQILLPIVFNNGSDELSHESLAL-LVMFPLGES 179

Query: 676  HCXXXXXXXXXXXXXXXXLTQPNIEVRVNSASLIEMVVSGTRSLEERAAIGSLDGLFEGI 855
             C                L   + +VRVNSA+L+E+VV GT S E RA + S+D +++G+
Sbjct: 180  ECASLASDSMKIGYLSRMLAHNSFDVRVNSAALVEIVVVGTHSPELRAEVSSVDEIYDGV 239

Query: 856  TQILNYPFSYPRALKVGIKALFALCLVKQNRSKAVSAGAAGALIDRLADFEKCDAERALA 1035
              +L  P S+PRALK+GIKALFALCLVK  R KAV+AGA   L+DRLADFEKCDAERALA
Sbjct: 240  VDLLRSPISHPRALKIGIKALFALCLVKNTRQKAVAAGAPAVLVDRLADFEKCDAERALA 299

Query: 1036 TIELLCRTPMGCSAFAAHALTVPLLVKIILKISDRATEYAAGALLSLCSGWEELQRDAVA 1215
            T+ELLCR P GC+AFAAHALTVP+LVKIILKIS+RATEYAAGALLSLCS  E  QR+AVA
Sbjct: 300  TVELLCRIPAGCAAFAAHALTVPMLVKIILKISNRATEYAAGALLSLCSESERCQREAVA 359

Query: 1216 AGVVTQLLLLVQSDCTEXXXXXXXXXXXXXXDSWPDDSVGNSDDFRGSDVV 1368
            AGV+TQLLLL+QSDCTE              DSWP DSVGNSDDF  S VV
Sbjct: 360  AGVLTQLLLLMQSDCTERAKRKAQMLLKLLRDSWPQDSVGNSDDFACSQVV 410


>ref|XP_002313124.1| predicted protein [Populus trichocarpa] gi|118483121|gb|ABK93469.1|
            unknown [Populus trichocarpa] gi|222849532|gb|EEE87079.1|
            predicted protein [Populus trichocarpa]
          Length = 413

 Score =  478 bits (1229), Expect = e-132
 Identities = 253/413 (61%), Positives = 293/413 (70%)
 Frame = +1

Query: 136  MKGCLESIDVGVQIPFHFRCPISLELMRDPVTVSTGQTYDRCSIESWVATGNSTCPVTRV 315
            M G LE +D+ VQIP+HFRCPISLELM DPVTVSTGQTYDR SIESWVATGN+TCPVTR 
Sbjct: 1    MPGSLEPLDLTVQIPYHFRCPISLELMCDPVTVSTGQTYDRSSIESWVATGNTTCPVTRA 60

Query: 316  PLSDFNLIPNHTLRRLIQEWCVNNRSLGVERIPTPKQPADPTLVRXXXXXXXXXXXXXXX 495
            PL+DF LIPNHTLRRLIQ+WCV NR+ GVERIPTPKQPA+P+LVR               
Sbjct: 61   PLTDFTLIPNHTLRRLIQDWCVANRAFGVERIPTPKQPAEPSLVRSLLNQAASASNPTHS 120

Query: 496  XXXXXXXXXXXXXDSEKNRSIISSNNPVNFLLPIVFSXXXXXXXXXXXXXXVVMFSLTEH 675
                         DS+KNRS+ISS+N    L+ +VFS              +V+F LTE 
Sbjct: 121  RLSALRRLRGLARDSDKNRSVISSHNVREVLVNLVFSTSQSSDLSHESLAILVLFPLTEF 180

Query: 676  HCXXXXXXXXXXXXXXXXLTQPNIEVRVNSASLIEMVVSGTRSLEERAAIGSLDGLFEGI 855
             C                L   +IEVRVNSA+LIE V++GTRS + R  I + + +FEG+
Sbjct: 181  DCVGISSEPERISYLANLLFHSSIEVRVNSAALIENVIAGTRSSDLRLQISNTEIIFEGV 240

Query: 856  TQILNYPFSYPRALKVGIKALFALCLVKQNRSKAVSAGAAGALIDRLADFEKCDAERALA 1035
             +IL  P S PRALK+GIKALFALCLVKQ R KAV+AGAA  LIDRLADF+KCDAERALA
Sbjct: 241  IEILKNPLSSPRALKIGIKALFALCLVKQTRHKAVTAGAAETLIDRLADFDKCDAERALA 300

Query: 1036 TIELLCRTPMGCSAFAAHALTVPLLVKIILKISDRATEYAAGALLSLCSGWEELQRDAVA 1215
            TIELLCR  +GC+AFAAHALTVPLLVK ILKISDRATEYAAGALL+LCS  E  Q++AV 
Sbjct: 301  TIELLCRIQVGCAAFAAHALTVPLLVKTILKISDRATEYAAGALLALCSASELSQKEAVC 360

Query: 1216 AGVVTQLLLLVQSDCTEXXXXXXXXXXXXXXDSWPDDSVGNSDDFRGSDVVPF 1374
            AG++TQLLLLVQSDCT+              D+WP+DSVGNSDDF  S+VVPF
Sbjct: 361  AGILTQLLLLVQSDCTDRAKRKAQMLLKLLRDAWPEDSVGNSDDFLCSEVVPF 413


>ref|XP_003607940.1| U-box domain-containing protein [Medicago truncatula]
            gi|355508995|gb|AES90137.1| U-box domain-containing
            protein [Medicago truncatula]
          Length = 451

 Score =  477 bits (1228), Expect = e-132
 Identities = 247/405 (60%), Positives = 289/405 (71%)
 Frame = +1

Query: 136  MKGCLESIDVGVQIPFHFRCPISLELMRDPVTVSTGQTYDRCSIESWVATGNSTCPVTRV 315
            M+GCLE +D+GVQIP+HFRCPISLELMRDPVTVSTGQTYDR SIESWV TGN+TCPVTR 
Sbjct: 1    MRGCLEPLDLGVQIPYHFRCPISLELMRDPVTVSTGQTYDRNSIESWVNTGNTTCPVTRT 60

Query: 316  PLSDFNLIPNHTLRRLIQEWCVNNRSLGVERIPTPKQPADPTLVRXXXXXXXXXXXXXXX 495
             L+DF  IPNHTLRRLIQ+WCV+NR+ GV+RIPTPKQPAD  LVR               
Sbjct: 61   NLTDFTFIPNHTLRRLIQDWCVSNRAFGVQRIPTPKQPADAALVRSLLNQISSHSAPTQL 120

Query: 496  XXXXXXXXXXXXXDSEKNRSIISSNNPVNFLLPIVFSXXXXXXXXXXXXXXVVMFSLTEH 675
                         DSE NRS+ISS N  N +LPI+F+              +V+F L+E 
Sbjct: 121  RLNSLRRLRSLTRDSEYNRSLISSLNVRNIILPILFNNGLDELKNESLAL-IVLFPLSES 179

Query: 676  HCXXXXXXXXXXXXXXXXLTQPNIEVRVNSASLIEMVVSGTRSLEERAAIGSLDGLFEGI 855
             C                L+  + +VRVNSA+LIE++V+GT S E R  + ++DG+++G+
Sbjct: 180  ECTSLASDSDKINYLTSLLSHDSFDVRVNSAALIEIIVAGTHSPEIRLQVSNVDGIYDGV 239

Query: 856  TQILNYPFSYPRALKVGIKALFALCLVKQNRSKAVSAGAAGALIDRLADFEKCDAERALA 1035
             +IL  P SYPRALK+GIKALFALCLVKQ R +AVSAGA   LIDRLADFEKCDAERALA
Sbjct: 240  VEILKNPISYPRALKIGIKALFALCLVKQTRHRAVSAGAPVVLIDRLADFEKCDAERALA 299

Query: 1036 TIELLCRTPMGCSAFAAHALTVPLLVKIILKISDRATEYAAGALLSLCSGWEELQRDAVA 1215
            T+ELLCR P GC++FA HALTVP+LVKIILKISDRATEYAAGAL++LCS  E  QR+AVA
Sbjct: 300  TVELLCRVPAGCASFAGHALTVPMLVKIILKISDRATEYAAGALMALCSESERCQREAVA 359

Query: 1216 AGVVTQLLLLVQSDCTEXXXXXXXXXXXXXXDSWPDDSVGNSDDF 1350
            AGV+TQLLLLVQSDCTE              DSWP DSVGNSDDF
Sbjct: 360  AGVLTQLLLLVQSDCTERAKRKAQLLLKLLRDSWPQDSVGNSDDF 404


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