BLASTX nr result
ID: Coptis25_contig00009374
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00009374 (1486 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN74163.1| hypothetical protein VITISV_026443 [Vitis vinifera] 499 e-139 ref|XP_002285110.1| PREDICTED: U-box domain-containing protein 2... 497 e-138 ref|XP_003529402.1| PREDICTED: U-box domain-containing protein 2... 478 e-132 ref|XP_002313124.1| predicted protein [Populus trichocarpa] gi|1... 478 e-132 ref|XP_003607940.1| U-box domain-containing protein [Medicago tr... 477 e-132 >emb|CAN74163.1| hypothetical protein VITISV_026443 [Vitis vinifera] Length = 476 Score = 499 bits (1285), Expect = e-139 Identities = 266/422 (63%), Positives = 301/422 (71%), Gaps = 2/422 (0%) Frame = +1 Query: 115 STKHRQEMKGCLESIDVGVQIPFHFRCPISLELMRDPVTVSTGQTYDRCSIESWVATGNS 294 + + +++M G LE +DVGVQIP+HFRCPISLELM DPVTVSTGQTYDR SIE WV TGN+ Sbjct: 55 AVERKKKMPGSLEPLDVGVQIPYHFRCPISLELMCDPVTVSTGQTYDRASIEYWVGTGNT 114 Query: 295 TCPVTRVPLSDFNLIPNHTLRRLIQEWCVNNRSLGVERIPTPKQPADPTLVRXXXXXXXX 474 TCPVTR L+DF LIPNHTLRRLIQ+WCV NRS GVERIPTPKQPADP VR Sbjct: 115 TCPVTRSSLTDFTLIPNHTLRRLIQDWCVANRSFGVERIPTPKQPADPASVRSLQTQVSS 174 Query: 475 XXXXXXXXXXXXXXXXXXXXDSEKNRSIISSNNPVNFLLPIVFSXXXXXXXXXXXXXX-- 648 DS+KNRSII S+N LLP++FS Sbjct: 175 QSNPSHTRLSAVKRLRGLARDSDKNRSIIGSHNVQEVLLPVIFSDSECDSAELKHESLAL 234 Query: 649 VVMFSLTEHHCXXXXXXXXXXXXXXXXLTQPNIEVRVNSASLIEMVVSGTRSLEERAAIG 828 +VMF L+E C L +IEVRVNSA+LIE+VV+GTRSL+ RA I Sbjct: 235 LVMFPLSESECAFVASQPDRVAHLVSLLFHASIEVRVNSAALIEIVVAGTRSLDLRAQIS 294 Query: 829 SLDGLFEGITQILNYPFSYPRALKVGIKALFALCLVKQNRSKAVSAGAAGALIDRLADFE 1008 ++D +FEGIT ILNYP +YPRALKVGIKALFALCL KQ+R KAV+AGA ALIDRLADFE Sbjct: 295 NVDEIFEGITGILNYPLAYPRALKVGIKALFALCLAKQSRHKAVAAGAVTALIDRLADFE 354 Query: 1009 KCDAERALATIELLCRTPMGCSAFAAHALTVPLLVKIILKISDRATEYAAGALLSLCSGW 1188 KCD ERALAT+ELLCR P GC+AFAAHALTVPLLV+ ILK+SDRATEYAAGALLSLCS Sbjct: 355 KCDVERALATVELLCRVPAGCAAFAAHALTVPLLVRKILKVSDRATEYAAGALLSLCSAA 414 Query: 1189 EELQRDAVAAGVVTQLLLLVQSDCTEXXXXXXXXXXXXXXDSWPDDSVGNSDDFRGSDVV 1368 E+ QR+AV+AGVVTQLLLLVQSDCTE DSWP+DSV NSDDF SDVV Sbjct: 415 EQSQREAVSAGVVTQLLLLVQSDCTERAKRKAQLLLKLLRDSWPEDSVVNSDDFGCSDVV 474 Query: 1369 PF 1374 PF Sbjct: 475 PF 476 >ref|XP_002285110.1| PREDICTED: U-box domain-containing protein 26 [Vitis vinifera] Length = 415 Score = 497 bits (1279), Expect = e-138 Identities = 266/415 (64%), Positives = 296/415 (71%), Gaps = 2/415 (0%) Frame = +1 Query: 136 MKGCLESIDVGVQIPFHFRCPISLELMRDPVTVSTGQTYDRCSIESWVATGNSTCPVTRV 315 M G LE +DVGVQIP+HFRCPISLELM DPVTVSTGQTYDR SIE WV TGN+TCPVTR Sbjct: 1 MPGSLEPLDVGVQIPYHFRCPISLELMCDPVTVSTGQTYDRASIEYWVGTGNTTCPVTRS 60 Query: 316 PLSDFNLIPNHTLRRLIQEWCVNNRSLGVERIPTPKQPADPTLVRXXXXXXXXXXXXXXX 495 L+DF LIPNHTLRRLIQ+WCV NRS GVERIPTPKQPADP VR Sbjct: 61 SLTDFTLIPNHTLRRLIQDWCVANRSFGVERIPTPKQPADPASVRSLQTQVSSQSNPSHT 120 Query: 496 XXXXXXXXXXXXXDSEKNRSIISSNNPVNFLLPIVFSXXXXXXXXXXXXXX--VVMFSLT 669 DS+KNRSII S+N LLP++FS +VMF L+ Sbjct: 121 RLSAVKRLRGLARDSDKNRSIIGSHNVQEVLLPVIFSDSECDSAELKHESLALLVMFPLS 180 Query: 670 EHHCXXXXXXXXXXXXXXXXLTQPNIEVRVNSASLIEMVVSGTRSLEERAAIGSLDGLFE 849 E C L +IEVRVNSA+LIE+VV+GTRSL+ RA I ++D +FE Sbjct: 181 ESECAFVASQPDRVAHLVSLLFHASIEVRVNSAALIEIVVAGTRSLDLRAQISNVDEIFE 240 Query: 850 GITQILNYPFSYPRALKVGIKALFALCLVKQNRSKAVSAGAAGALIDRLADFEKCDAERA 1029 GIT ILNYP +YPRALKVGIKALFALCL KQ+R KAV+AGA ALIDRLADFEKCD ERA Sbjct: 241 GITGILNYPLAYPRALKVGIKALFALCLAKQSRHKAVAAGAVTALIDRLADFEKCDVERA 300 Query: 1030 LATIELLCRTPMGCSAFAAHALTVPLLVKIILKISDRATEYAAGALLSLCSGWEELQRDA 1209 LAT+ELLCR P GC+AFAAHALTVPLLV+ ILK+SDRATEYAAGALLSLCS E+ QR+A Sbjct: 301 LATVELLCRVPAGCAAFAAHALTVPLLVRKILKVSDRATEYAAGALLSLCSAAEQSQREA 360 Query: 1210 VAAGVVTQLLLLVQSDCTEXXXXXXXXXXXXXXDSWPDDSVGNSDDFRGSDVVPF 1374 V+AGVVTQLLLLVQSDCTE DSWP+DSV NSDDF SDVVPF Sbjct: 361 VSAGVVTQLLLLVQSDCTERAKRKAQLLLKLLRDSWPEDSVVNSDDFGCSDVVPF 415 >ref|XP_003529402.1| PREDICTED: U-box domain-containing protein 26-like [Glycine max] Length = 414 Score = 478 bits (1230), Expect = e-132 Identities = 252/411 (61%), Positives = 288/411 (70%) Frame = +1 Query: 136 MKGCLESIDVGVQIPFHFRCPISLELMRDPVTVSTGQTYDRCSIESWVATGNSTCPVTRV 315 M G LE +D+GV IP+HFRCPISLELMRDPVTV TGQTYDR SIESWV+TGN+TCPVTR Sbjct: 1 MPGSLEPLDLGVHIPYHFRCPISLELMRDPVTVCTGQTYDRASIESWVSTGNTTCPVTRA 60 Query: 316 PLSDFNLIPNHTLRRLIQEWCVNNRSLGVERIPTPKQPADPTLVRXXXXXXXXXXXXXXX 495 LSDF LIPNHTLRRLIQEWCV NR+ GVERIPTPKQPADP LVR Sbjct: 61 TLSDFTLIPNHTLRRLIQEWCVANRAFGVERIPTPKQPADPALVRSLLNQASSDSAPAHL 120 Query: 496 XXXXXXXXXXXXXDSEKNRSIISSNNPVNFLLPIVFSXXXXXXXXXXXXXXVVMFSLTEH 675 DS+KNRS+I+S+N + LLPIVF+ +VMF L E Sbjct: 121 RLSSLRRLRQLARDSDKNRSLIASHNLLQILLPIVFNNGSDELSHESLAL-LVMFPLGES 179 Query: 676 HCXXXXXXXXXXXXXXXXLTQPNIEVRVNSASLIEMVVSGTRSLEERAAIGSLDGLFEGI 855 C L + +VRVNSA+L+E+VV GT S E RA + S+D +++G+ Sbjct: 180 ECASLASDSMKIGYLSRMLAHNSFDVRVNSAALVEIVVVGTHSPELRAEVSSVDEIYDGV 239 Query: 856 TQILNYPFSYPRALKVGIKALFALCLVKQNRSKAVSAGAAGALIDRLADFEKCDAERALA 1035 +L P S+PRALK+GIKALFALCLVK R KAV+AGA L+DRLADFEKCDAERALA Sbjct: 240 VDLLRSPISHPRALKIGIKALFALCLVKNTRQKAVAAGAPAVLVDRLADFEKCDAERALA 299 Query: 1036 TIELLCRTPMGCSAFAAHALTVPLLVKIILKISDRATEYAAGALLSLCSGWEELQRDAVA 1215 T+ELLCR P GC+AFAAHALTVP+LVKIILKIS+RATEYAAGALLSLCS E QR+AVA Sbjct: 300 TVELLCRIPAGCAAFAAHALTVPMLVKIILKISNRATEYAAGALLSLCSESERCQREAVA 359 Query: 1216 AGVVTQLLLLVQSDCTEXXXXXXXXXXXXXXDSWPDDSVGNSDDFRGSDVV 1368 AGV+TQLLLL+QSDCTE DSWP DSVGNSDDF S VV Sbjct: 360 AGVLTQLLLLMQSDCTERAKRKAQMLLKLLRDSWPQDSVGNSDDFACSQVV 410 >ref|XP_002313124.1| predicted protein [Populus trichocarpa] gi|118483121|gb|ABK93469.1| unknown [Populus trichocarpa] gi|222849532|gb|EEE87079.1| predicted protein [Populus trichocarpa] Length = 413 Score = 478 bits (1229), Expect = e-132 Identities = 253/413 (61%), Positives = 293/413 (70%) Frame = +1 Query: 136 MKGCLESIDVGVQIPFHFRCPISLELMRDPVTVSTGQTYDRCSIESWVATGNSTCPVTRV 315 M G LE +D+ VQIP+HFRCPISLELM DPVTVSTGQTYDR SIESWVATGN+TCPVTR Sbjct: 1 MPGSLEPLDLTVQIPYHFRCPISLELMCDPVTVSTGQTYDRSSIESWVATGNTTCPVTRA 60 Query: 316 PLSDFNLIPNHTLRRLIQEWCVNNRSLGVERIPTPKQPADPTLVRXXXXXXXXXXXXXXX 495 PL+DF LIPNHTLRRLIQ+WCV NR+ GVERIPTPKQPA+P+LVR Sbjct: 61 PLTDFTLIPNHTLRRLIQDWCVANRAFGVERIPTPKQPAEPSLVRSLLNQAASASNPTHS 120 Query: 496 XXXXXXXXXXXXXDSEKNRSIISSNNPVNFLLPIVFSXXXXXXXXXXXXXXVVMFSLTEH 675 DS+KNRS+ISS+N L+ +VFS +V+F LTE Sbjct: 121 RLSALRRLRGLARDSDKNRSVISSHNVREVLVNLVFSTSQSSDLSHESLAILVLFPLTEF 180 Query: 676 HCXXXXXXXXXXXXXXXXLTQPNIEVRVNSASLIEMVVSGTRSLEERAAIGSLDGLFEGI 855 C L +IEVRVNSA+LIE V++GTRS + R I + + +FEG+ Sbjct: 181 DCVGISSEPERISYLANLLFHSSIEVRVNSAALIENVIAGTRSSDLRLQISNTEIIFEGV 240 Query: 856 TQILNYPFSYPRALKVGIKALFALCLVKQNRSKAVSAGAAGALIDRLADFEKCDAERALA 1035 +IL P S PRALK+GIKALFALCLVKQ R KAV+AGAA LIDRLADF+KCDAERALA Sbjct: 241 IEILKNPLSSPRALKIGIKALFALCLVKQTRHKAVTAGAAETLIDRLADFDKCDAERALA 300 Query: 1036 TIELLCRTPMGCSAFAAHALTVPLLVKIILKISDRATEYAAGALLSLCSGWEELQRDAVA 1215 TIELLCR +GC+AFAAHALTVPLLVK ILKISDRATEYAAGALL+LCS E Q++AV Sbjct: 301 TIELLCRIQVGCAAFAAHALTVPLLVKTILKISDRATEYAAGALLALCSASELSQKEAVC 360 Query: 1216 AGVVTQLLLLVQSDCTEXXXXXXXXXXXXXXDSWPDDSVGNSDDFRGSDVVPF 1374 AG++TQLLLLVQSDCT+ D+WP+DSVGNSDDF S+VVPF Sbjct: 361 AGILTQLLLLVQSDCTDRAKRKAQMLLKLLRDAWPEDSVGNSDDFLCSEVVPF 413 >ref|XP_003607940.1| U-box domain-containing protein [Medicago truncatula] gi|355508995|gb|AES90137.1| U-box domain-containing protein [Medicago truncatula] Length = 451 Score = 477 bits (1228), Expect = e-132 Identities = 247/405 (60%), Positives = 289/405 (71%) Frame = +1 Query: 136 MKGCLESIDVGVQIPFHFRCPISLELMRDPVTVSTGQTYDRCSIESWVATGNSTCPVTRV 315 M+GCLE +D+GVQIP+HFRCPISLELMRDPVTVSTGQTYDR SIESWV TGN+TCPVTR Sbjct: 1 MRGCLEPLDLGVQIPYHFRCPISLELMRDPVTVSTGQTYDRNSIESWVNTGNTTCPVTRT 60 Query: 316 PLSDFNLIPNHTLRRLIQEWCVNNRSLGVERIPTPKQPADPTLVRXXXXXXXXXXXXXXX 495 L+DF IPNHTLRRLIQ+WCV+NR+ GV+RIPTPKQPAD LVR Sbjct: 61 NLTDFTFIPNHTLRRLIQDWCVSNRAFGVQRIPTPKQPADAALVRSLLNQISSHSAPTQL 120 Query: 496 XXXXXXXXXXXXXDSEKNRSIISSNNPVNFLLPIVFSXXXXXXXXXXXXXXVVMFSLTEH 675 DSE NRS+ISS N N +LPI+F+ +V+F L+E Sbjct: 121 RLNSLRRLRSLTRDSEYNRSLISSLNVRNIILPILFNNGLDELKNESLAL-IVLFPLSES 179 Query: 676 HCXXXXXXXXXXXXXXXXLTQPNIEVRVNSASLIEMVVSGTRSLEERAAIGSLDGLFEGI 855 C L+ + +VRVNSA+LIE++V+GT S E R + ++DG+++G+ Sbjct: 180 ECTSLASDSDKINYLTSLLSHDSFDVRVNSAALIEIIVAGTHSPEIRLQVSNVDGIYDGV 239 Query: 856 TQILNYPFSYPRALKVGIKALFALCLVKQNRSKAVSAGAAGALIDRLADFEKCDAERALA 1035 +IL P SYPRALK+GIKALFALCLVKQ R +AVSAGA LIDRLADFEKCDAERALA Sbjct: 240 VEILKNPISYPRALKIGIKALFALCLVKQTRHRAVSAGAPVVLIDRLADFEKCDAERALA 299 Query: 1036 TIELLCRTPMGCSAFAAHALTVPLLVKIILKISDRATEYAAGALLSLCSGWEELQRDAVA 1215 T+ELLCR P GC++FA HALTVP+LVKIILKISDRATEYAAGAL++LCS E QR+AVA Sbjct: 300 TVELLCRVPAGCASFAGHALTVPMLVKIILKISDRATEYAAGALMALCSESERCQREAVA 359 Query: 1216 AGVVTQLLLLVQSDCTEXXXXXXXXXXXXXXDSWPDDSVGNSDDF 1350 AGV+TQLLLLVQSDCTE DSWP DSVGNSDDF Sbjct: 360 AGVLTQLLLLVQSDCTERAKRKAQLLLKLLRDSWPQDSVGNSDDF 404