BLASTX nr result

ID: Coptis25_contig00009369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009369
         (954 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACH87169.1| MYB transcription factor [Camellia sinensis]           227   3e-57
ref|XP_003541400.1| PREDICTED: transcription factor ASG4-like [G...   226   5e-57
gb|ABL63122.1| MYB transcription factor [Catharanthus roseus]         225   1e-56
ref|XP_002275037.1| PREDICTED: transcription factor ASG4-like [V...   223   4e-56
emb|CBI32620.3| unnamed protein product [Vitis vinifera]              223   4e-56

>gb|ACH87169.1| MYB transcription factor [Camellia sinensis]
          Length = 289

 Score =  227 bits (579), Expect = 3e-57
 Identities = 124/218 (56%), Positives = 154/218 (70%), Gaps = 10/218 (4%)
 Frame = -3

Query: 952 QIRSHAQKYFLKVQKNGTTAHVPPPRPKRKANHPYPRKSMKDA-------SIRPATLSCI 794
           QIRSHAQKYFLKVQKNGT AHVPPPRPKRKA HPYP+K+ K+           P++L+ +
Sbjct: 70  QIRSHAQKYFLKVQKNGTIAHVPPPRPKRKAAHPYPQKAPKNVLAPLQAFMAYPSSLNSL 129

Query: 793 ASGFSIWDDSAVLMNTASSGSISSQDEYTHLHTFEGSVDIASEGLLSLGSNSFNGRESSC 614
           A G+S WDD+ +L+++ S G + SQDEY +LH  E   DI S+G   + ++  +   S  
Sbjct: 130 APGYSPWDDTPMLIHSPSGGIMLSQDEY-NLHGVEA--DIGSKGAARISNSGIDAIGSLS 186

Query: 613 TTLSNSSMPK---PGSLLDGMPDFAEVYNFIGSIFDPDTGGHFQKLEEMDPINLRTVLLL 443
            T+S+S + K   PGSL  G+PDFAEVY+F+GS+FDPDT GH QKL+EMDPIN  T LLL
Sbjct: 187 RTISSSELSKQGKPGSLFHGIPDFAEVYSFMGSVFDPDTQGHVQKLKEMDPINFETALLL 246

Query: 442 MRNLTINLSSPGYEPIEMVLSSHDTNGIISGKTGVIAT 329
           MRNLTINLSSP +EPI  VLSS+D N     KT  IAT
Sbjct: 247 MRNLTINLSSPDFEPIREVLSSYDVN----SKTVGIAT 280


>ref|XP_003541400.1| PREDICTED: transcription factor ASG4-like [Glycine max]
          Length = 295

 Score =  226 bits (577), Expect = 5e-57
 Identities = 118/223 (52%), Positives = 155/223 (69%), Gaps = 10/223 (4%)
 Frame = -3

Query: 952 QIRSHAQKYFLKVQKNGTTAHVPPPRPKRKANHPYPRKSMKDASIR-PATL------SCI 794
           QIRSHAQKYFLKVQKNGT AHVPPPRPKRKA HPYP+K+ K+  +  PA++      + +
Sbjct: 71  QIRSHAQKYFLKVQKNGTVAHVPPPRPKRKAAHPYPQKASKNVLVPLPASVGYASSRNTL 130

Query: 793 ASGFSIWDDSAVLMNTASSGSISSQDEYTHLHTFEGSVDIASEGLLSLGSNSFNGRESSC 614
           A GF+ WD++++LMN  +   ++ QDE  ++H      DI S+G+  + ++S +G  +S 
Sbjct: 131 APGFASWDETSLLMNAGADKPMTCQDELNNVH-HGNEADIGSKGITQITNSSLSGVGNST 189

Query: 613 TTLSNSSMPKPGS---LLDGMPDFAEVYNFIGSIFDPDTGGHFQKLEEMDPINLRTVLLL 443
            TL  S +PK G    +L G+PDFAEVY FIGS+FDP+T  H QKL+EMDPIN  TVLLL
Sbjct: 190 RTLLTSEIPKQGKQAPVLHGLPDFAEVYGFIGSVFDPETNDHVQKLKEMDPINFETVLLL 249

Query: 442 MRNLTINLSSPGYEPIEMVLSSHDTNGIISGKTGVIATRDRSC 314
           MRNLT+NLSSP +EPI+ VLS++D N +  G      T D SC
Sbjct: 250 MRNLTVNLSSPDFEPIKKVLSTYDVNPMAVGIDVKKQTNDLSC 292


>gb|ABL63122.1| MYB transcription factor [Catharanthus roseus]
          Length = 287

 Score =  225 bits (574), Expect = 1e-56
 Identities = 116/204 (56%), Positives = 151/204 (74%), Gaps = 10/204 (4%)
 Frame = -3

Query: 952 QIRSHAQKYFLKVQKNGTTAHVPPPRPKRKANHPYPRKSMKDASIR-------PATLSCI 794
           QIRSHAQKYFLKVQKNGT AHVPPPRPKRKA HPYP+K+ K+  +        P+ ++ +
Sbjct: 77  QIRSHAQKYFLKVQKNGTIAHVPPPRPKRKAAHPYPQKAPKNVLVPAQASIGYPSAVNSL 136

Query: 793 ASGFSIWDDSAVLMNTASSGSISSQDEYTHLHTFEGSVDIASEGLLSLGSNSFNGRESSC 614
           A G+  WDD+++L++   SG + SQDEY +LH  E   DI S+G   + +++ +G  SS 
Sbjct: 137 APGYPTWDDASLLVSVPPSGILPSQDEY-NLHGAEA--DIGSKGATRISNSNISGIGSSS 193

Query: 613 TTLSNSSMPKPG---SLLDGMPDFAEVYNFIGSIFDPDTGGHFQKLEEMDPINLRTVLLL 443
            TL  S +PK G   SL+ G+PDFAEVY+FIGS+FDP+T GH QKL+EMDPIN  TVLLL
Sbjct: 194 RTLPASEVPKQGKQGSLVHGIPDFAEVYSFIGSVFDPETKGHVQKLKEMDPINFETVLLL 253

Query: 442 MRNLTINLSSPGYEPIEMVLSSHD 371
           MRNLT+NL++P +EPI+ VLSS+D
Sbjct: 254 MRNLTVNLANPDFEPIKQVLSSYD 277


>ref|XP_002275037.1| PREDICTED: transcription factor ASG4-like [Vitis vinifera]
          Length = 293

 Score =  223 bits (569), Expect = 4e-56
 Identities = 121/227 (53%), Positives = 155/227 (68%), Gaps = 14/227 (6%)
 Frame = -3

Query: 952 QIRSHAQKYFLKVQKNGTTAHVPPPRPKRKANHPYPRKSMKDASIR-------PATLSCI 794
           QIRSHAQKYFLKVQKNGT AHVPPPRPKRKA HPYP+K+  +  +        P++L  +
Sbjct: 70  QIRSHAQKYFLKVQKNGTVAHVPPPRPKRKAIHPYPQKAPTNVLVPLQASVAYPSSLHSL 129

Query: 793 ASGFSIWDDSAVLMNTASSGSISSQDEYTHLHTFEGSVDIASEGLLSLGSNSFNGRESSC 614
              +S WD++++L+NTA+SG    QDEY+ LH  E   DI S+G+  + ++   G   S 
Sbjct: 130 VPVYSPWDETSMLINTATSGIAPPQDEYS-LHMVEA--DIGSKGVAKISNSDVCGIGRSS 186

Query: 613 TTLSNSSMPKP---GSLLDGMPDFAEVYNFIGSIFDPDTGGHFQKLEEMDPINLRTVLLL 443
            TL +S + K    GS L G+PDF+EVY FIGS+FDPD+ G  +KL+EMDPIN  TVLLL
Sbjct: 187 RTLPSSELQKQRKQGSALHGIPDFSEVYTFIGSVFDPDSEGQIEKLKEMDPINFETVLLL 246

Query: 442 MRNLTINLSSPGYEPIEMVLSSHDTN----GIISGKTGVIATRDRSC 314
           MRNLTINLSSP +EPI  VLSS+D N    G+ +G  G + + D SC
Sbjct: 247 MRNLTINLSSPDFEPIREVLSSYDANSKSVGVDAGSPGKVQSTDLSC 293


>emb|CBI32620.3| unnamed protein product [Vitis vinifera]
          Length = 283

 Score =  223 bits (569), Expect = 4e-56
 Identities = 121/227 (53%), Positives = 155/227 (68%), Gaps = 14/227 (6%)
 Frame = -3

Query: 952 QIRSHAQKYFLKVQKNGTTAHVPPPRPKRKANHPYPRKSMKDASIR-------PATLSCI 794
           QIRSHAQKYFLKVQKNGT AHVPPPRPKRKA HPYP+K+  +  +        P++L  +
Sbjct: 60  QIRSHAQKYFLKVQKNGTVAHVPPPRPKRKAIHPYPQKAPTNVLVPLQASVAYPSSLHSL 119

Query: 793 ASGFSIWDDSAVLMNTASSGSISSQDEYTHLHTFEGSVDIASEGLLSLGSNSFNGRESSC 614
              +S WD++++L+NTA+SG    QDEY+ LH  E   DI S+G+  + ++   G   S 
Sbjct: 120 VPVYSPWDETSMLINTATSGIAPPQDEYS-LHMVEA--DIGSKGVAKISNSDVCGIGRSS 176

Query: 613 TTLSNSSMPKP---GSLLDGMPDFAEVYNFIGSIFDPDTGGHFQKLEEMDPINLRTVLLL 443
            TL +S + K    GS L G+PDF+EVY FIGS+FDPD+ G  +KL+EMDPIN  TVLLL
Sbjct: 177 RTLPSSELQKQRKQGSALHGIPDFSEVYTFIGSVFDPDSEGQIEKLKEMDPINFETVLLL 236

Query: 442 MRNLTINLSSPGYEPIEMVLSSHDTN----GIISGKTGVIATRDRSC 314
           MRNLTINLSSP +EPI  VLSS+D N    G+ +G  G + + D SC
Sbjct: 237 MRNLTINLSSPDFEPIREVLSSYDANSKSVGVDAGSPGKVQSTDLSC 283


Top