BLASTX nr result

ID: Coptis25_contig00009360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009360
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234088.1| uncharacterized protein LOC543815 [Solanum l...   137   9e-31
gb|ADB11358.1| tau class glutathione transferase GSTU26 [Populus...   129   2e-28
ref|XP_002264117.1| PREDICTED: probable glutathione S-transferas...   128   4e-28
emb|CAN72240.1| hypothetical protein VITISV_010777 [Vitis vinifera]   128   4e-28
gb|AFK37185.1| unknown [Medicago truncatula]                          127   1e-27

>ref|NP_001234088.1| uncharacterized protein LOC543815 [Solanum lycopersicum]
           gi|10567808|gb|AAG16758.1| putative glutathione
           S-transferase T3 [Solanum lycopersicum]
          Length = 225

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/113 (58%), Positives = 79/113 (69%), Gaps = 1/113 (0%)
 Frame = -3

Query: 340 PMLLQYNPVHKKVPVLVHNGKPVAESLVIVEYIDETWKQYPLLPEDPYDRAVARFWAKYM 161
           P+LLQYNPVHKK+PVLVHNGKP+AESLVI+EYI+ETWK  PLLPEDPY+RA ARFWAK++
Sbjct: 43  PLLLQYNPVHKKIPVLVHNGKPIAESLVILEYIEETWKHNPLLPEDPYERAKARFWAKFV 102

Query: 160 QDTCKTAAFSVFSTVGEAQENATKEARE-IQXXXXXXXXXXXXXXXTIGFVDV 5
            D C    F  F+ VG  Q+   KEARE ++                IGF+DV
Sbjct: 103 DDKCVPGIFGTFAKVGVEQQKIAKEARENLKILEDELGKKHFFGDAKIGFMDV 155


>gb|ADB11358.1| tau class glutathione transferase GSTU26 [Populus trichocarpa]
          Length = 225

 Score =  129 bits (325), Expect = 2e-28
 Identities = 58/88 (65%), Positives = 72/88 (81%)
 Frame = -3

Query: 340 PMLLQYNPVHKKVPVLVHNGKPVAESLVIVEYIDETWKQYPLLPEDPYDRAVARFWAKYM 161
           P+LL++NPVHKKVPVLVH+ KP+AESLVI+EYIDETWK YPLLPEDPY+RA+ARFWAK+ 
Sbjct: 41  PLLLKHNPVHKKVPVLVHDDKPIAESLVILEYIDETWKDYPLLPEDPYERAMARFWAKFA 100

Query: 160 QDTCKTAAFSVFSTVGEAQENATKEARE 77
           ++ C   AF+ F   GE +E A + A E
Sbjct: 101 EEKCLMGAFAAFWKEGEEKEKAIESALE 128


>ref|XP_002264117.1| PREDICTED: probable glutathione S-transferase [Vitis vinifera]
          Length = 225

 Score =  128 bits (322), Expect = 4e-28
 Identities = 67/114 (58%), Positives = 79/114 (69%), Gaps = 2/114 (1%)
 Frame = -3

Query: 340 PMLLQYNPVHKKVPVLVHNGKPVAESLVIVEYIDETWKQYPLLPEDPYDRAVARFWAKYM 161
           P LLQYNPVHKKVPVLVHNGKP+AESLVI+EYIDETW++ PLLPEDPY+RA+ARFWAK+ 
Sbjct: 42  PSLLQYNPVHKKVPVLVHNGKPIAESLVILEYIDETWRETPLLPEDPYERAMARFWAKFG 101

Query: 160 QDTCKTA-AFSVFSTVGEAQENATKEARE-IQXXXXXXXXXXXXXXXTIGFVDV 5
            D   T+  + VF   G+ QE A  EA E +Q                IGFVD+
Sbjct: 102 DDKVLTSIVWGVFFKEGKEQEEAMLEAMEHLQFLEDELKGKRFFGGERIGFVDL 155


>emb|CAN72240.1| hypothetical protein VITISV_010777 [Vitis vinifera]
          Length = 225

 Score =  128 bits (322), Expect = 4e-28
 Identities = 67/114 (58%), Positives = 79/114 (69%), Gaps = 2/114 (1%)
 Frame = -3

Query: 340 PMLLQYNPVHKKVPVLVHNGKPVAESLVIVEYIDETWKQYPLLPEDPYDRAVARFWAKYM 161
           P LLQYNPVHKKVPVLVHNGKP+AESLVI+EYIDETW++ PLLPEDPY+RA+ARFWAK+ 
Sbjct: 42  PSLLQYNPVHKKVPVLVHNGKPIAESLVILEYIDETWRETPLLPEDPYERAMARFWAKFG 101

Query: 160 QDTCKTA-AFSVFSTVGEAQENATKEARE-IQXXXXXXXXXXXXXXXTIGFVDV 5
            D   T+  + VF   G+ QE A  EA E +Q                IGFVD+
Sbjct: 102 DDKVLTSIVWGVFFKEGKEQEEAMLEAMEHLQFLEDELKGKRFFGGERIGFVDL 155


>gb|AFK37185.1| unknown [Medicago truncatula]
          Length = 223

 Score =  127 bits (318), Expect = 1e-27
 Identities = 58/87 (66%), Positives = 70/87 (80%)
 Frame = -3

Query: 337 MLLQYNPVHKKVPVLVHNGKPVAESLVIVEYIDETWKQYPLLPEDPYDRAVARFWAKYMQ 158
           MLLQYNPV+KKVPVLVH+GK ++ESLVI+EYIDE WKQ PLLP DPY+RA ARFWAK+  
Sbjct: 44  MLLQYNPVYKKVPVLVHDGKSISESLVILEYIDEIWKQNPLLPHDPYERAKARFWAKFAD 103

Query: 157 DTCKTAAFSVFSTVGEAQENATKEARE 77
           + C  A  + FS +GE Q+ A +EARE
Sbjct: 104 EKCVPAFIATFSKIGEEQQEAAQEARE 130


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