BLASTX nr result

ID: Coptis25_contig00009324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009324
         (1434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282696.1| PREDICTED: IST1 homolog [Vitis vinifera] gi|...   367   5e-99
ref|XP_002533970.1| protein with unknown function [Ricinus commu...   346   8e-93
gb|ACU23342.1| unknown [Glycine max]                                  338   2e-90
ref|XP_003555907.1| PREDICTED: IST1 homolog [Glycine max]             338   3e-90
ref|XP_003536682.1| PREDICTED: IST1 homolog [Glycine max]             333   7e-89

>ref|XP_002282696.1| PREDICTED: IST1 homolog [Vitis vinifera] gi|297737811|emb|CBI27012.3|
            unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  367 bits (941), Expect = 5e-99
 Identities = 194/326 (59%), Positives = 240/326 (73%), Gaps = 3/326 (0%)
 Frame = +1

Query: 142  MSLLNQLFNRGLLGAKCKTCLTLVISRIKLLQNKRQIQLNQMRKEISQFLQTGQDPIARI 321
            MSLLNQLFNRG+LGAKCKTCL L ISRIKLLQNKR + L QMRKEI+QFLQTGQ+ IARI
Sbjct: 1    MSLLNQLFNRGILGAKCKTCLNLAISRIKLLQNKRSLHLKQMRKEIAQFLQTGQEAIARI 60

Query: 322  RVEHVIREMNMQAAYDILELFCEFVYARVPILESQRDCPQELQEAIASIIFAAPRCSDLP 501
            RVEHVIRE N+ AAY+ILELFCEFV ARVPILE+QR+CP EL+EA+ASIIFAAPRCSD+P
Sbjct: 61   RVEHVIREQNIWAAYEILELFCEFVLARVPILETQRECPTELREAVASIIFAAPRCSDVP 120

Query: 502  ELLQIRNLFTTKYGKEFISAASELRPDTSVNRDIIEKLSVKAPSVDAKLRLLKEIAKEYN 681
            +LLQI+NLF  KYGKEFI AASELRPDTSVNR IIEKLSV  P+ +AKL+ LKEIA+EYN
Sbjct: 121  DLLQIKNLFAAKYGKEFILAASELRPDTSVNRAIIEKLSVSTPTGEAKLKQLKEIAQEYN 180

Query: 682  LDWDASSTEAEFRKKHEDLLDGSIKICNGATDSRSPIERGSQNMSVPSNGQPIIPADQNR 861
            L+WD+S+TEAEF KKHEDLLDGS ++C+G   S++P  + S  +  P   +P + + +  
Sbjct: 181  LEWDSSNTEAEFSKKHEDLLDGSKQVCSGGAISQAPSIQSS--LQCPPTSEPNVISSRTI 238

Query: 862  SRNVE---SANEAIRNLSLVSPGKAELSVSNHNVGSVIDAKRSSSDSCDAMEXXXXXXXX 1032
             + ++   S N A +  SL SP + E S+ ++N G V D+K + S S D +E        
Sbjct: 239  QQGIQALHSPNTASKK-SLSSPDEVEHSIKSYNAGQVSDSKETRSQSSDILERARAAIAS 297

Query: 1033 XXXXXXXXXXXXELVNVNSGFPRIQE 1110
                        EL N+  G  +++E
Sbjct: 298  ADRASAAARAAAELANITFGPWKLEE 323


>ref|XP_002533970.1| protein with unknown function [Ricinus communis]
            gi|223526053|gb|EEF28417.1| protein with unknown function
            [Ricinus communis]
          Length = 327

 Score =  346 bits (888), Expect = 8e-93
 Identities = 191/328 (58%), Positives = 234/328 (71%), Gaps = 3/328 (0%)
 Frame = +1

Query: 142  MSLLNQLFNRGLLGAKCKTCLTLVISRIKLLQNKRQIQLNQMRKEISQFLQTGQDPIARI 321
            MSLLNQLFNRG+ GAKCKTCLTL ISRIKLLQNKR +QL  MRKEI+QFLQ GQ+ IARI
Sbjct: 1    MSLLNQLFNRGVFGAKCKTCLTLSISRIKLLQNKRDLQLKHMRKEIAQFLQAGQEAIARI 60

Query: 322  RVEHVIREMNMQAAYDILELFCEFVYARVPILESQRDCPQELQEAIASIIFAAPRCSDLP 501
            RVEHVIRE N+ AAY+ILELFCEFV ARVPILESQ++CP ELQEA+ASIIFAAPRCS++P
Sbjct: 61   RVEHVIREQNIWAAYEILELFCEFVLARVPILESQKECPFELQEAVASIIFAAPRCSEVP 120

Query: 502  ELLQIRNLFTTKYGKEFISAASELRPDTSVNRDIIEKLSVKAPSVDAKLRLLKEIAKEYN 681
            +LLQI+NLFTTKYGKEF+ AASELRPD+ VNR IIE+LSV AP  +A+L++LKEIA EYN
Sbjct: 121  DLLQIKNLFTTKYGKEFVMAASELRPDSGVNRAIIERLSVNAPPGEARLKVLKEIAHEYN 180

Query: 682  LDWDASSTEAEFRKKHEDLLDGSIKICNGATDSRSPIERGSQNMSVPSNGQPIIPADQNR 861
            L+WD+S+TEAE  KKHEDLL GS +I      S++P+++ S      +   PII  D  +
Sbjct: 181  LEWDSSNTEAELGKKHEDLLGGSKQIVAEGALSQAPMKQSSPKPPCLNGTSPIIDTDSKQ 240

Query: 862  ---SRNVESANEAIRNLSLVSPGKAELSVSNHNVGSVIDAKRSSSDSCDAMEXXXXXXXX 1032
               S+NV+ A   I +L+ V   + E S+ +    +  DAKR +  S D +E        
Sbjct: 241  GFVSQNVQ-APSTISHLTSVD-NEIEPSIRHQTTEAFTDAKRRTLASSDVLERARAAIAS 298

Query: 1033 XXXXXXXXXXXXELVNVNSGFPRIQESS 1116
                        ELVNV  G  ++Q  S
Sbjct: 299  AERATAAARAAAELVNVQFGSLKLQGKS 326


>gb|ACU23342.1| unknown [Glycine max]
          Length = 324

 Score =  338 bits (867), Expect = 2e-90
 Identities = 180/290 (62%), Positives = 217/290 (74%), Gaps = 1/290 (0%)
 Frame = +1

Query: 142  MSLLNQLFNRGLLGAKCKTCLTLVISRIKLLQNKRQIQLNQMRKEISQFLQTGQDPIARI 321
            MSLLNQLFNRG+ G +CKTCL L ISRIKLLQNKR +QL QM KEISQFLQ GQ+ IARI
Sbjct: 1    MSLLNQLFNRGVFGTRCKTCLNLAISRIKLLQNKRDMQLKQMCKEISQFLQAGQEAIARI 60

Query: 322  RVEHVIREMNMQAAYDILELFCEFVYARVPILESQRDCPQELQEAIASIIFAAPRCSDLP 501
            RVEH+IRE N  AAY+ILELFCEFV ARVPI+E+QR+CP EL+EAIASIIFAAPRCSD+P
Sbjct: 61   RVEHIIREQNTWAAYEILELFCEFVLARVPIIENQRECPTELREAIASIIFAAPRCSDVP 120

Query: 502  ELLQIRNLFTTKYGKEFISAASELRPDTSVNRDIIEKLSVKAPSVDAKLRLLKEIAKEYN 681
            +LL I+NLFTTKYGKEF+SA SELRPD+ VNR IIEKLSV APS + KL++L EIA+EYN
Sbjct: 121  DLLHIKNLFTTKYGKEFVSAVSELRPDSGVNRTIIEKLSVSAPSGEVKLKVLWEIAEEYN 180

Query: 682  LDWDASSTEAEFRKKHEDLLDGSIKICNGATDSRSPIERGSQNMSVPSNGQPIIPA-DQN 858
            + WD+S TEAEFRK HEDLL G+ ++  GAT S +P   GS N S       I PA D+ 
Sbjct: 181  IAWDSSKTEAEFRKNHEDLLGGAKQVSAGATLSHTPSRNGSNNPSPCITEPSIKPAQDKQ 240

Query: 859  RSRNVESANEAIRNLSLVSPGKAELSVSNHNVGSVIDAKRSSSDSCDAME 1008
              +++E+ + +  N SL    + E S  N+NV +      +   S D +E
Sbjct: 241  EYKHLEAPSPSNNNFSL-DTNEIEQSHKNNNVPAGDTKSETRFQSFDVLE 289


>ref|XP_003555907.1| PREDICTED: IST1 homolog [Glycine max]
          Length = 324

 Score =  338 bits (866), Expect = 3e-90
 Identities = 180/291 (61%), Positives = 219/291 (75%), Gaps = 2/291 (0%)
 Frame = +1

Query: 142  MSLLNQLFNRGLLGAKCKTCLTLVISRIKLLQNKRQIQLNQMRKEISQFLQTGQDPIARI 321
            MSLLNQLFNRG+ G +CKTCL L ISRIKLLQNKR +QL QM KEISQFLQ GQ+ IARI
Sbjct: 1    MSLLNQLFNRGVFGTRCKTCLNLAISRIKLLQNKRDMQLKQMCKEISQFLQAGQEAIARI 60

Query: 322  RVEHVIREMNMQAAYDILELFCEFVYARVPILESQRDCPQELQEAIASIIFAAPRCSDLP 501
            RVEH+IRE N  AAY+ILELFCEFV ARVPI+E+QR+CP EL+EAIASIIFAAPRCSD+P
Sbjct: 61   RVEHIIREQNTWAAYEILELFCEFVLARVPIIENQRECPTELREAIASIIFAAPRCSDVP 120

Query: 502  ELLQIRNLFTTKYGKEFISAASELRPDTSVNRDIIEKLSVKAPSVDAKLRLLKEIAKEYN 681
            +LL I+NLFTTKYGKEF+SA SELRPD+ VNR IIEKLSV APS + KL++L+EIA+EYN
Sbjct: 121  DLLHIKNLFTTKYGKEFVSAVSELRPDSGVNRTIIEKLSVSAPSGEVKLKVLREIAEEYN 180

Query: 682  LDWDASSTEAEFRKKHEDLLDGSIKICNGATDSRSPIERGSQNMSVPSNGQPIIP--ADQ 855
            + WD+S TEAEFRK HEDLL G+ ++  GAT S +P   GS N S P   +P I    D+
Sbjct: 181  IAWDSSKTEAEFRKNHEDLLGGAKQVSAGATLSHTPSRNGSNNPS-PCITEPSIKPVQDK 239

Query: 856  NRSRNVESANEAIRNLSLVSPGKAELSVSNHNVGSVIDAKRSSSDSCDAME 1008
               +++E+ + +  N SL    + E S  N+NV +      +   S D +E
Sbjct: 240  QEYKHLEAPSPSNNNSSL-DTNEIEQSHKNNNVPAGDAKSETRFQSSDVLE 289


>ref|XP_003536682.1| PREDICTED: IST1 homolog [Glycine max]
          Length = 324

 Score =  333 bits (854), Expect = 7e-89
 Identities = 176/289 (60%), Positives = 210/289 (72%)
 Frame = +1

Query: 142  MSLLNQLFNRGLLGAKCKTCLTLVISRIKLLQNKRQIQLNQMRKEISQFLQTGQDPIARI 321
            MSL+NQLFNRG+ G +CKTCL L ISRIKLLQNKR IQL QM KEISQFLQ GQ+ IARI
Sbjct: 1    MSLINQLFNRGVFGTRCKTCLNLAISRIKLLQNKRDIQLKQMCKEISQFLQAGQEAIARI 60

Query: 322  RVEHVIREMNMQAAYDILELFCEFVYARVPILESQRDCPQELQEAIASIIFAAPRCSDLP 501
            RVEH+IRE N  AAY+ILELFCEFV ARVPI+E+QR+CP EL+EAIASIIFAAPRCSD+P
Sbjct: 61   RVEHIIREQNTWAAYEILELFCEFVLARVPIIENQRECPTELREAIASIIFAAPRCSDVP 120

Query: 502  ELLQIRNLFTTKYGKEFISAASELRPDTSVNRDIIEKLSVKAPSVDAKLRLLKEIAKEYN 681
            +LL I+NLFTTKYGKEF+SA SELRPD+ VNR IIEKLSV APS + KL++L+EIA+EYN
Sbjct: 121  DLLHIKNLFTTKYGKEFVSAVSELRPDSGVNRTIIEKLSVSAPSGEVKLKVLREIAEEYN 180

Query: 682  LDWDASSTEAEFRKKHEDLLDGSIKICNGATDSRSPIERGSQNMSVPSNGQPIIPADQNR 861
            + WD+S TEAEFRK HEDLL G+ ++  GAT S +P   GS N S       I      +
Sbjct: 181  IAWDSSKTEAEFRKNHEDLLGGAKQVSAGATLSHTPNRNGSNNPSPRITEPSIKSVHAKQ 240

Query: 862  SRNVESANEAIRNLSLVSPGKAELSVSNHNVGSVIDAKRSSSDSCDAME 1008
                  A     N SL++  + E S  N++V +          S D +E
Sbjct: 241  EYKPLEAPSPSNNNSLLNTNEIEHSHENNDVPAGDAKSEIRFQSSDVLE 289


Top