BLASTX nr result

ID: Coptis25_contig00009322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009322
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi comple...   181   7e-44
emb|CBI38713.3| unnamed protein product [Vitis vinifera]              181   7e-44
ref|XP_004166514.1| PREDICTED: LOW QUALITY PROTEIN: conserved ol...   178   4e-43
ref|XP_004140637.1| PREDICTED: conserved oligomeric Golgi comple...   178   4e-43
ref|NP_192049.4| uncharacterized protein [Arabidopsis thaliana] ...   167   6e-40

>ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis
            vinifera]
          Length = 1105

 Score =  181 bits (458), Expect = 7e-44
 Identities = 93/109 (85%), Positives = 96/109 (88%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3    LLSNEYQEALQQKMMEPS---KLFLGGAGVQKTGTEITTALNNMDVSGEYVLKLRHEIEE 173
            LL NEYQEALQQKM EP+   KLFLGG GVQKTGTEI TALNNMDVS EYVLKLRHEIEE
Sbjct: 833  LLGNEYQEALQQKMREPNLGAKLFLGGVGVQKTGTEIATALNNMDVSSEYVLKLRHEIEE 892

Query: 174  QCVEVFPAPADREKVKSCLSELGEMNDSFKQVLNAGMEQLVNTVTPRIR 320
            QC EVFP PADREKVKSCLSELGEM++ FKQ LNAGMEQLV TVTPRIR
Sbjct: 893  QCAEVFPTPADREKVKSCLSELGEMSNIFKQTLNAGMEQLVATVTPRIR 941


>emb|CBI38713.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score =  181 bits (458), Expect = 7e-44
 Identities = 93/109 (85%), Positives = 96/109 (88%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   LLSNEYQEALQQKMMEPS---KLFLGGAGVQKTGTEITTALNNMDVSGEYVLKLRHEIEE 173
           LL NEYQEALQQKM EP+   KLFLGG GVQKTGTEI TALNNMDVS EYVLKLRHEIEE
Sbjct: 435 LLGNEYQEALQQKMREPNLGAKLFLGGVGVQKTGTEIATALNNMDVSSEYVLKLRHEIEE 494

Query: 174 QCVEVFPAPADREKVKSCLSELGEMNDSFKQVLNAGMEQLVNTVTPRIR 320
           QC EVFP PADREKVKSCLSELGEM++ FKQ LNAGMEQLV TVTPRIR
Sbjct: 495 QCAEVFPTPADREKVKSCLSELGEMSNIFKQTLNAGMEQLVATVTPRIR 543


>ref|XP_004166514.1| PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex
           subunit 4-like [Cucumis sativus]
          Length = 751

 Score =  178 bits (452), Expect = 4e-43
 Identities = 89/109 (81%), Positives = 98/109 (89%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   LLSNEYQEALQQKMMEPS---KLFLGGAGVQKTGTEITTALNNMDVSGEYVLKLRHEIEE 173
           LLSNEYQEALQQKM EP+   KLFLGG GVQKTGTEI TALNNMDVS EYVLKL+HEIEE
Sbjct: 479 LLSNEYQEALQQKMREPNLGAKLFLGGVGVQKTGTEIATALNNMDVSSEYVLKLKHEIEE 538

Query: 174 QCVEVFPAPADREKVKSCLSELGEMNDSFKQVLNAGMEQLVNTVTPRIR 320
           QC EVFPAPA+REKVKSCLSELG+M+++FKQ LNAG+EQLV T+ PRIR
Sbjct: 539 QCAEVFPAPAEREKVKSCLSELGDMSNTFKQALNAGLEQLVGTIAPRIR 587


>ref|XP_004140637.1| PREDICTED: conserved oligomeric Golgi complex subunit 4-like
           [Cucumis sativus]
          Length = 751

 Score =  178 bits (452), Expect = 4e-43
 Identities = 89/109 (81%), Positives = 98/109 (89%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   LLSNEYQEALQQKMMEPS---KLFLGGAGVQKTGTEITTALNNMDVSGEYVLKLRHEIEE 173
           LLSNEYQEALQQKM EP+   KLFLGG GVQKTGTEI TALNNMDVS EYVLKL+HEIEE
Sbjct: 479 LLSNEYQEALQQKMREPNLGAKLFLGGVGVQKTGTEIATALNNMDVSSEYVLKLKHEIEE 538

Query: 174 QCVEVFPAPADREKVKSCLSELGEMNDSFKQVLNAGMEQLVNTVTPRIR 320
           QC EVFPAPA+REKVKSCLSELG+M+++FKQ LNAG+EQLV T+ PRIR
Sbjct: 539 QCAEVFPAPAEREKVKSCLSELGDMSNTFKQALNAGLEQLVGTIAPRIR 587


>ref|NP_192049.4| uncharacterized protein [Arabidopsis thaliana]
            gi|332656619|gb|AEE82019.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 1110

 Score =  167 bits (424), Expect = 6e-40
 Identities = 82/109 (75%), Positives = 96/109 (88%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3    LLSNEYQEALQQKMMEPS---KLFLGGAGVQKTGTEITTALNNMDVSGEYVLKLRHEIEE 173
            LL N+Y EALQQK+ EP+   +LFLGG GV+ TGTEI TALNNMDVS EY+LKL+HEIEE
Sbjct: 838  LLGNDYHEALQQKIREPNLGARLFLGGIGVENTGTEIATALNNMDVSCEYILKLKHEIEE 897

Query: 174  QCVEVFPAPADREKVKSCLSELGEMNDSFKQVLNAGMEQLVNTVTPRIR 320
            QC EVFPAPADRE++KSCLSELGE++ +FKQ+LN+GMEQLV TVTPRIR
Sbjct: 898  QCTEVFPAPADRERIKSCLSELGELSSTFKQLLNSGMEQLVATVTPRIR 946


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