BLASTX nr result
ID: Coptis25_contig00009320
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00009320
(583 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi comple... 224 2e-73
emb|CBI38713.3| unnamed protein product [Vitis vinifera] 224 2e-73
ref|XP_004166514.1| PREDICTED: LOW QUALITY PROTEIN: conserved ol... 219 6e-72
ref|XP_004140637.1| PREDICTED: conserved oligomeric Golgi comple... 219 6e-72
ref|XP_003520884.1| PREDICTED: conserved oligomeric Golgi comple... 219 1e-71
>ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis
vinifera]
Length = 1105
Score = 224 bits (571), Expect(2) = 2e-73
Identities = 111/134 (82%), Positives = 122/134 (91%), Gaps = 1/134 (0%)
Frame = -1
Query: 418 GDMNNSFKQLLNAGME-LVTAVTPRIRPVLDRVGIISYELSEAEYAENEVNDPWVQKLLH 242
G+M+N FKQ LNAGME LV VTPRIRPVLD VG ISYELSEAEYA+NEVNDPWVQ+LLH
Sbjct: 915 GEMSNIFKQTLNAGMEQLVATVTPRIRPVLDSVGTISYELSEAEYADNEVNDPWVQRLLH 974
Query: 241 AVEANASWLQPIMTTNHFDSFVHVVIDFIIKRLEVIMMQKRFSQLGGLQLNRDVRALVSH 62
AVE NA+WLQP+MT N++DSFVH++IDFI KRLEVIMMQKRFSQLGGLQL+RD RALV H
Sbjct: 975 AVETNATWLQPVMTANNYDSFVHLIIDFIAKRLEVIMMQKRFSQLGGLQLDRDARALVHH 1034
Query: 61 FSSMTQRTVRDKFA 20
FSSMTQRTVRDKFA
Sbjct: 1035 FSSMTQRTVRDKFA 1048
Score = 77.4 bits (189), Expect(2) = 2e-73
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = -3
Query: 560 GPQLATSLNNMDVSGEYVLKLRHEIEEQCVEAFPAPAGGEMVKSCLS 420
G ++AT+LNNMDVS EYVLKLRHEIEEQC E FP PA E VKSCLS
Sbjct: 866 GTEIATALNNMDVSSEYVLKLRHEIEEQCAEVFPTPADREKVKSCLS 912
>emb|CBI38713.3| unnamed protein product [Vitis vinifera]
Length = 707
Score = 224 bits (571), Expect(2) = 2e-73
Identities = 111/134 (82%), Positives = 122/134 (91%), Gaps = 1/134 (0%)
Frame = -1
Query: 418 GDMNNSFKQLLNAGME-LVTAVTPRIRPVLDRVGIISYELSEAEYAENEVNDPWVQKLLH 242
G+M+N FKQ LNAGME LV VTPRIRPVLD VG ISYELSEAEYA+NEVNDPWVQ+LLH
Sbjct: 517 GEMSNIFKQTLNAGMEQLVATVTPRIRPVLDSVGTISYELSEAEYADNEVNDPWVQRLLH 576
Query: 241 AVEANASWLQPIMTTNHFDSFVHVVIDFIIKRLEVIMMQKRFSQLGGLQLNRDVRALVSH 62
AVE NA+WLQP+MT N++DSFVH++IDFI KRLEVIMMQKRFSQLGGLQL+RD RALV H
Sbjct: 577 AVETNATWLQPVMTANNYDSFVHLIIDFIAKRLEVIMMQKRFSQLGGLQLDRDARALVHH 636
Query: 61 FSSMTQRTVRDKFA 20
FSSMTQRTVRDKFA
Sbjct: 637 FSSMTQRTVRDKFA 650
Score = 77.4 bits (189), Expect(2) = 2e-73
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = -3
Query: 560 GPQLATSLNNMDVSGEYVLKLRHEIEEQCVEAFPAPAGGEMVKSCLS 420
G ++AT+LNNMDVS EYVLKLRHEIEEQC E FP PA E VKSCLS
Sbjct: 468 GTEIATALNNMDVSSEYVLKLRHEIEEQCAEVFPTPADREKVKSCLS 514
>ref|XP_004166514.1| PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex
subunit 4-like [Cucumis sativus]
Length = 751
Score = 219 bits (558), Expect(2) = 6e-72
Identities = 107/134 (79%), Positives = 121/134 (90%), Gaps = 1/134 (0%)
Frame = -1
Query: 418 GDMNNSFKQLLNAGME-LVTAVTPRIRPVLDRVGIISYELSEAEYAENEVNDPWVQKLLH 242
GDM+N+FKQ LNAG+E LV + PRIRPVLD V ISYELSE EYA+NEVNDPWVQ+LLH
Sbjct: 561 GDMSNTFKQALNAGLEQLVGTIAPRIRPVLDTVATISYELSETEYADNEVNDPWVQRLLH 620
Query: 241 AVEANASWLQPIMTTNHFDSFVHVVIDFIIKRLEVIMMQKRFSQLGGLQLNRDVRALVSH 62
AVE N +WLQP+MT N++DSFVH+VIDFI+KRLEVIM+QKRFSQLGGLQL+RD RALVSH
Sbjct: 621 AVETNVAWLQPLMTANNYDSFVHLVIDFIVKRLEVIMVQKRFSQLGGLQLDRDARALVSH 680
Query: 61 FSSMTQRTVRDKFA 20
FSSMTQRTVRDKFA
Sbjct: 681 FSSMTQRTVRDKFA 694
Score = 77.4 bits (189), Expect(2) = 6e-72
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = -3
Query: 560 GPQLATSLNNMDVSGEYVLKLRHEIEEQCVEAFPAPAGGEMVKSCLS 420
G ++AT+LNNMDVS EYVLKL+HEIEEQC E FPAPA E VKSCLS
Sbjct: 512 GTEIATALNNMDVSSEYVLKLKHEIEEQCAEVFPAPAEREKVKSCLS 558
>ref|XP_004140637.1| PREDICTED: conserved oligomeric Golgi complex subunit 4-like
[Cucumis sativus]
Length = 751
Score = 219 bits (558), Expect(2) = 6e-72
Identities = 107/134 (79%), Positives = 121/134 (90%), Gaps = 1/134 (0%)
Frame = -1
Query: 418 GDMNNSFKQLLNAGME-LVTAVTPRIRPVLDRVGIISYELSEAEYAENEVNDPWVQKLLH 242
GDM+N+FKQ LNAG+E LV + PRIRPVLD V ISYELSE EYA+NEVNDPWVQ+LLH
Sbjct: 561 GDMSNTFKQALNAGLEQLVGTIAPRIRPVLDTVATISYELSETEYADNEVNDPWVQRLLH 620
Query: 241 AVEANASWLQPIMTTNHFDSFVHVVIDFIIKRLEVIMMQKRFSQLGGLQLNRDVRALVSH 62
AVE N +WLQP+MT N++DSFVH+VIDFI+KRLEVIM+QKRFSQLGGLQL+RD RALVSH
Sbjct: 621 AVETNVAWLQPLMTANNYDSFVHLVIDFIVKRLEVIMVQKRFSQLGGLQLDRDARALVSH 680
Query: 61 FSSMTQRTVRDKFA 20
FSSMTQRTVRDKFA
Sbjct: 681 FSSMTQRTVRDKFA 694
Score = 77.4 bits (189), Expect(2) = 6e-72
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = -3
Query: 560 GPQLATSLNNMDVSGEYVLKLRHEIEEQCVEAFPAPAGGEMVKSCLS 420
G ++AT+LNNMDVS EYVLKL+HEIEEQC E FPAPA E VKSCLS
Sbjct: 512 GTEIATALNNMDVSSEYVLKLKHEIEEQCAEVFPAPAEREKVKSCLS 558
>ref|XP_003520884.1| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Glycine
max]
Length = 1114
Score = 219 bits (557), Expect(2) = 1e-71
Identities = 105/133 (78%), Positives = 123/133 (92%), Gaps = 1/133 (0%)
Frame = -1
Query: 415 DMNNSFKQLLNAGME-LVTAVTPRIRPVLDRVGIISYELSEAEYAENEVNDPWVQKLLHA 239
D +N+FKQ LNAG+E LV +TPRIRP+LD VG ISYELSEAEYA+NEVNDPWVQ+LLHA
Sbjct: 925 DSSNAFKQALNAGIEQLVATITPRIRPLLDSVGTISYELSEAEYADNEVNDPWVQRLLHA 984
Query: 238 VEANASWLQPIMTTNHFDSFVHVVIDFIIKRLEVIMMQKRFSQLGGLQLNRDVRALVSHF 59
VE+N +WLQP+MT N++D+FVH++IDFI+KRLEVIMMQKRFSQLGGLQL+RD RALVSHF
Sbjct: 985 VESNVAWLQPLMTANNYDTFVHLIIDFIVKRLEVIMMQKRFSQLGGLQLDRDARALVSHF 1044
Query: 58 SSMTQRTVRDKFA 20
S+MTQRTVRDKFA
Sbjct: 1045 SAMTQRTVRDKFA 1057
Score = 76.6 bits (187), Expect(2) = 1e-71
Identities = 35/47 (74%), Positives = 40/47 (85%)
Frame = -3
Query: 560 GPQLATSLNNMDVSGEYVLKLRHEIEEQCVEAFPAPAGGEMVKSCLS 420
G ++AT+LNNMDVS EYVLKL+HEIEEQC E FPAPA E VKSCL+
Sbjct: 875 GTEIATALNNMDVSSEYVLKLKHEIEEQCAEVFPAPADREKVKSCLT 921