BLASTX nr result

ID: Coptis25_contig00009317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009317
         (1170 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285873.1| PREDICTED: N-glycosylase/DNA lyase [Vitis vi...   335   1e-89
ref|XP_004171524.1| PREDICTED: N-glycosylase/DNA lyase-like, par...   330   4e-88
ref|XP_004149809.1| PREDICTED: N-glycosylase/DNA lyase-like [Cuc...   330   4e-88
ref|XP_002520336.1| 8-oxoguanine DNA glycosylase, putative [Rici...   324   2e-86
ref|XP_002890455.1| 8-oxoguanine-DNA glycosylase 1 [Arabidopsis ...   317   5e-84

>ref|XP_002285873.1| PREDICTED: N-glycosylase/DNA lyase [Vitis vinifera]
          Length = 399

 Score =  335 bits (859), Expect = 1e-89
 Identities = 166/224 (74%), Positives = 187/224 (83%)
 Frame = -2

Query: 1160 VRCLVQFLCSSNNNIGRITGMVDFISSLGVYLGSVEGFDFHEFPSLERLSLVSENEFRAA 981
            + CL+QFLCSSNNNIGRIT MVDF+SSLG YLGSV GFDF+EFPSL+RLS+VSE +FR A
Sbjct: 176  LECLIQFLCSSNNNIGRITKMVDFVSSLGNYLGSVGGFDFYEFPSLDRLSMVSEEDFREA 235

Query: 980  GFGYRAKYIVGTVKSLQSKPGGGAEWLASLRNLDLNEVVEALCTLPGVGPKVAACIALFS 801
            GFGYRAKYI+GTVK+LQSK GGG EWLASLR +DL EVV+AL TLPGVGPKVAACIALFS
Sbjct: 236  GFGYRAKYIIGTVKALQSKSGGGIEWLASLREMDLQEVVDALSTLPGVGPKVAACIALFS 295

Query: 800  LDQHHAIPVDTHVWQIATRYLIPELANARLTPKLCIRVAEAFVSKFGKYAGWAQTVLFIA 621
            LDQHHAIPVDTHVWQIATRYLIPELA ARLTPKLC RVA+AFVSK+GKYAGWAQT+LFIA
Sbjct: 296  LDQHHAIPVDTHVWQIATRYLIPELAGARLTPKLCSRVADAFVSKYGKYAGWAQTLLFIA 355

Query: 620  ELPLQKALLQPTFESQKKKKSIRNKGESGFDERSGGRECQTHNC 489
            ELP QK +L P F + ++ K    K  +  +   G     T +C
Sbjct: 356  ELPSQKTILPPKFWAIEENKDTNIKASTTGNGPCGSSLSITKSC 399


>ref|XP_004171524.1| PREDICTED: N-glycosylase/DNA lyase-like, partial [Cucumis sativus]
          Length = 359

 Score =  330 bits (846), Expect = 4e-88
 Identities = 161/205 (78%), Positives = 181/205 (88%)
 Frame = -2

Query: 1160 VRCLVQFLCSSNNNIGRITGMVDFISSLGVYLGSVEGFDFHEFPSLERLSLVSENEFRAA 981
            + CL+QFLCSSNNNIGRIT MVD+ISSLG YLG+V GFDF+EFPSLERLSLVSE E R A
Sbjct: 142  LECLIQFLCSSNNNIGRITKMVDYISSLGNYLGNVGGFDFYEFPSLERLSLVSEAELREA 201

Query: 980  GFGYRAKYIVGTVKSLQSKPGGGAEWLASLRNLDLNEVVEALCTLPGVGPKVAACIALFS 801
            GFGYRAKYI+G V +L++KP GGAEWL SLR+ DL EV+EAL TLPGVGPKVAAC+ALFS
Sbjct: 202  GFGYRAKYIIGAVNALKAKPVGGAEWLLSLRDSDLEEVIEALSTLPGVGPKVAACVALFS 261

Query: 800  LDQHHAIPVDTHVWQIATRYLIPELANARLTPKLCIRVAEAFVSKFGKYAGWAQTVLFIA 621
            LDQHHAIPVDTHVWQIATRYL+PELA ARLTPKLC RVAEAFVSK+GKYAGWAQT+LFIA
Sbjct: 262  LDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGWAQTLLFIA 321

Query: 620  ELPLQKALLQPTFESQKKKKSIRNK 546
            ELP QKALL    E+ K+K+S + +
Sbjct: 322  ELPQQKALLPANLENTKRKRSTKQQ 346


>ref|XP_004149809.1| PREDICTED: N-glycosylase/DNA lyase-like [Cucumis sativus]
          Length = 393

 Score =  330 bits (846), Expect = 4e-88
 Identities = 161/205 (78%), Positives = 181/205 (88%)
 Frame = -2

Query: 1160 VRCLVQFLCSSNNNIGRITGMVDFISSLGVYLGSVEGFDFHEFPSLERLSLVSENEFRAA 981
            + CL+QFLCSSNNNIGRIT MVD+ISSLG YLG+V GFDF+EFPSLERLSLVSE E R A
Sbjct: 176  LECLIQFLCSSNNNIGRITKMVDYISSLGNYLGNVGGFDFYEFPSLERLSLVSEAELREA 235

Query: 980  GFGYRAKYIVGTVKSLQSKPGGGAEWLASLRNLDLNEVVEALCTLPGVGPKVAACIALFS 801
            GFGYRAKYI+G V +L++KP GGAEWL SLR+ DL EV+EAL TLPGVGPKVAAC+ALFS
Sbjct: 236  GFGYRAKYIIGAVNALKAKPVGGAEWLLSLRDSDLEEVIEALSTLPGVGPKVAACVALFS 295

Query: 800  LDQHHAIPVDTHVWQIATRYLIPELANARLTPKLCIRVAEAFVSKFGKYAGWAQTVLFIA 621
            LDQHHAIPVDTHVWQIATRYL+PELA ARLTPKLC RVAEAFVSK+GKYAGWAQT+LFIA
Sbjct: 296  LDQHHAIPVDTHVWQIATRYLVPELAGARLTPKLCNRVAEAFVSKYGKYAGWAQTLLFIA 355

Query: 620  ELPLQKALLQPTFESQKKKKSIRNK 546
            ELP QKALL    E+ K+K+S + +
Sbjct: 356  ELPQQKALLPANLENTKRKRSTKQQ 380


>ref|XP_002520336.1| 8-oxoguanine DNA glycosylase, putative [Ricinus communis]
            gi|223540555|gb|EEF42122.1| 8-oxoguanine DNA glycosylase,
            putative [Ricinus communis]
          Length = 412

 Score =  324 bits (831), Expect = 2e-86
 Identities = 156/213 (73%), Positives = 180/213 (84%)
 Frame = -2

Query: 1160 VRCLVQFLCSSNNNIGRITGMVDFISSLGVYLGSVEGFDFHEFPSLERLSLVSENEFRAA 981
            + CL+QFLCSSNNNI RIT MVD++SSLG YLG+VEGF+F+EFP LERL LV+E + RAA
Sbjct: 160  LECLIQFLCSSNNNIARITKMVDYVSSLGQYLGNVEGFEFYEFPDLERLGLVTEEQLRAA 219

Query: 980  GFGYRAKYIVGTVKSLQSKPGGGAEWLASLRNLDLNEVVEALCTLPGVGPKVAACIALFS 801
            GFGYRAKYI GT+ +LQ KPGGG EWL +LR LDL  V++ALCTLPGVGPKVAACIALFS
Sbjct: 220  GFGYRAKYITGTIDALQLKPGGGVEWLTALRKLDLQVVIDALCTLPGVGPKVAACIALFS 279

Query: 800  LDQHHAIPVDTHVWQIATRYLIPELANARLTPKLCIRVAEAFVSKFGKYAGWAQTVLFIA 621
            LDQHHAIPVDTHVWQIATR+L+PELA ARLTPKLC RVA+AFVSK+GKYAGWAQT+LFIA
Sbjct: 280  LDQHHAIPVDTHVWQIATRHLLPELAGARLTPKLCSRVADAFVSKYGKYAGWAQTLLFIA 339

Query: 620  ELPLQKALLQPTFESQKKKKSIRNKGESGFDER 522
            ELP QK+LL  +F + K+ KS   K      E+
Sbjct: 340  ELPPQKSLLPSSFWTVKEIKSANKKDSEADSEK 372


>ref|XP_002890455.1| 8-oxoguanine-DNA glycosylase 1 [Arabidopsis lyrata subsp. lyrata]
            gi|297336297|gb|EFH66714.1| 8-oxoguanine-DNA glycosylase
            1 [Arabidopsis lyrata subsp. lyrata]
          Length = 366

 Score =  317 bits (811), Expect = 5e-84
 Identities = 155/211 (73%), Positives = 175/211 (82%)
 Frame = -2

Query: 1160 VRCLVQFLCSSNNNIGRITGMVDFISSLGVYLGSVEGFDFHEFPSLERLSLVSENEFRAA 981
            + CL+QFLCSSNNNIGRIT MVDF+SSLG++LG ++GF+FH+FPSL+RLS VSE EFR A
Sbjct: 152  LECLIQFLCSSNNNIGRITKMVDFVSSLGLHLGDIDGFEFHQFPSLDRLSRVSEAEFRKA 211

Query: 980  GFGYRAKYIVGTVKSLQSKPGGGAEWLASLRNLDLNEVVEALCTLPGVGPKVAACIALFS 801
            GFGYRAKYI GTV +LQSKPGGG EWL SLR LDL E V ALCTLPGVGPKVAACIALFS
Sbjct: 212  GFGYRAKYITGTVNALQSKPGGGDEWLLSLRKLDLQEAVSALCTLPGVGPKVAACIALFS 271

Query: 800  LDQHHAIPVDTHVWQIATRYLIPELANARLTPKLCIRVAEAFVSKFGKYAGWAQTVLFIA 621
            LDQH AIPVDTHVWQIAT YL+P+LA A+LTPKL  RVAEAFVSK+G+YAGWAQT+LFIA
Sbjct: 272  LDQHSAIPVDTHVWQIATNYLLPDLAGAKLTPKLHCRVAEAFVSKYGEYAGWAQTLLFIA 331

Query: 620  ELPLQKALLQPTFESQKKKKSIRNKGESGFD 528
            ELP QK LLQ   +   K  +     E+  D
Sbjct: 332  ELPAQKTLLQSFSQPISKLDNSTEDNETSCD 362


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