BLASTX nr result

ID: Coptis25_contig00009316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009316
         (1511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169661.1| PREDICTED: protein MOS2-like [Cucumis sativus]    213   1e-52
ref|XP_004144463.1| PREDICTED: protein MOS2-like [Cucumis sativus]    213   1e-52
ref|XP_003589709.1| Pre-mRNA-splicing factor spp2 [Medicago trun...   212   2e-52
ref|XP_002304388.1| predicted protein [Populus trichocarpa] gi|2...   212   2e-52
ref|XP_002326591.1| predicted protein [Populus trichocarpa] gi|2...   209   2e-51

>ref|XP_004169661.1| PREDICTED: protein MOS2-like [Cucumis sativus]
          Length = 478

 Score =  213 bits (541), Expect = 1e-52
 Identities = 113/219 (51%), Positives = 152/219 (69%), Gaps = 3/219 (1%)
 Frame = -2

Query: 1510 VVLKLSSNEE---VTVGVQEVAELGTVDDELCVKGLQEEKMRRGGSRDDRRKNERSSYXX 1340
            +VLKLS  +E   + V   ++AELG+ ++E  +K L+E K++   +   RR+        
Sbjct: 283  LVLKLSKRDEHVKLKVRATDIAELGSKEEEKFLKKLEELKVKNENTGQKRRREVEQVVEK 342

Query: 1339 XXXXXXXXXXXXXXXXXXSVNGAGYGPSSKEQERSVAVSWLTSHIRVRIISKDYRRGKLY 1160
                                NG     S  +++R+  +SWLTSHIRVRIISK+++ GK Y
Sbjct: 343  RE------------------NG-----SRDKEKRTGRLSWLTSHIRVRIISKEFKGGKFY 379

Query: 1159 LKKGEVLDVVGPNTCDISLDESKEIIQSVHQDLLETAVPKRGGPVLVLYGKHKGVFGYLV 980
            LKKGE++DVVGP+ CDIS+D S+E++Q V Q+LLETA+P+RGGPVLVLYGKHKGV+G LV
Sbjct: 380  LKKGEIVDVVGPSICDISIDGSRELVQGVSQELLETALPRRGGPVLVLYGKHKGVYGSLV 439

Query: 979  ERNMEKETGVVQDADSHELLNVHLEQIAEYLGDPDCIGY 863
            ER+++KETGVV+DADSHELLNV LEQIAEY+GDP  +GY
Sbjct: 440  ERDLDKETGVVRDADSHELLNVRLEQIAEYIGDPSYLGY 478


>ref|XP_004144463.1| PREDICTED: protein MOS2-like [Cucumis sativus]
          Length = 500

 Score =  213 bits (541), Expect = 1e-52
 Identities = 113/219 (51%), Positives = 152/219 (69%), Gaps = 3/219 (1%)
 Frame = -2

Query: 1510 VVLKLSSNEE---VTVGVQEVAELGTVDDELCVKGLQEEKMRRGGSRDDRRKNERSSYXX 1340
            +VLKLS  +E   + V   ++AELG+ ++E  +K L+E K++   +   RR+        
Sbjct: 305  LVLKLSKRDEHVKLKVRATDIAELGSKEEEKFLKKLEELKVKNENTGQKRRREVEQVVEK 364

Query: 1339 XXXXXXXXXXXXXXXXXXSVNGAGYGPSSKEQERSVAVSWLTSHIRVRIISKDYRRGKLY 1160
                                NG     S  +++R+  +SWLTSHIRVRIISK+++ GK Y
Sbjct: 365  RE------------------NG-----SRDKEKRTGRLSWLTSHIRVRIISKEFKGGKFY 401

Query: 1159 LKKGEVLDVVGPNTCDISLDESKEIIQSVHQDLLETAVPKRGGPVLVLYGKHKGVFGYLV 980
            LKKGE++DVVGP+ CDIS+D S+E++Q V Q+LLETA+P+RGGPVLVLYGKHKGV+G LV
Sbjct: 402  LKKGEIVDVVGPSICDISIDGSRELVQGVSQELLETALPRRGGPVLVLYGKHKGVYGSLV 461

Query: 979  ERNMEKETGVVQDADSHELLNVHLEQIAEYLGDPDCIGY 863
            ER+++KETGVV+DADSHELLNV LEQIAEY+GDP  +GY
Sbjct: 462  ERDLDKETGVVRDADSHELLNVRLEQIAEYIGDPSYLGY 500


>ref|XP_003589709.1| Pre-mRNA-splicing factor spp2 [Medicago truncatula]
            gi|355478757|gb|AES59960.1| Pre-mRNA-splicing factor spp2
            [Medicago truncatula]
          Length = 385

 Score =  212 bits (540), Expect = 2e-52
 Identities = 114/217 (52%), Positives = 150/217 (69%), Gaps = 1/217 (0%)
 Frame = -2

Query: 1510 VVLK-LSSNEEVTVGVQEVAELGTVDDELCVKGLQEEKMRRGGSRDDRRKNERSSYXXXX 1334
            VVL+ L S EEV V V++VAELG+V++E C++ L++ K+R G   +   K++R       
Sbjct: 186  VVLRVLGSGEEVKVKVEDVAELGSVEEERCLRKLKDLKIR-GRDEEKGSKSKRGR----- 239

Query: 1333 XXXXXXXXXXXXXXXXSVNGAGYGPSSKEQERSVAVSWLTSHIRVRIISKDYRRGKLYLK 1154
                             VNG G G   KE++    VSWLTSHIRVR+IS+  + G+LYLK
Sbjct: 240  ----------DGVDERRVNGNG-GVGGKEEKGRKQVSWLTSHIRVRVISRSLKGGRLYLK 288

Query: 1153 KGEVLDVVGPNTCDISLDESKEIIQSVHQDLLETAVPKRGGPVLVLYGKHKGVFGYLVER 974
            KGEVLDV+GP TCDIS+DES+EIIQ V QD+LETA+P+RGGPVLVL G+HKG FG L+ER
Sbjct: 289  KGEVLDVIGPTTCDISMDESREIIQGVSQDMLETAIPRRGGPVLVLSGRHKGAFGSLIER 348

Query: 973  NMEKETGVVQDADSHELLNVHLEQIAEYLGDPDCIGY 863
            + +K  G V+DAD+HE LNV  E +AEY+GDP  +G+
Sbjct: 349  DSDKGIGTVKDADTHERLNVEFEHMAEYIGDPSLLGH 385


>ref|XP_002304388.1| predicted protein [Populus trichocarpa] gi|222841820|gb|EEE79367.1|
            predicted protein [Populus trichocarpa]
          Length = 436

 Score =  212 bits (539), Expect = 2e-52
 Identities = 117/212 (55%), Positives = 144/212 (67%), Gaps = 2/212 (0%)
 Frame = -2

Query: 1492 SNEEVTVGVQEVAELGTVDDELCVKGLQ--EEKMRRGGSRDDRRKNERSSYXXXXXXXXX 1319
            S E V V V +VAELG+ ++E C+K L+  EEK    G R+ RR N+R+           
Sbjct: 247  SGERVKVRVSDVAELGSREEERCLKELKSIEEKKPSDGDREQRRVNKRNVESRDSLKM-- 304

Query: 1318 XXXXXXXXXXXSVNGAGYGPSSKEQERSVAVSWLTSHIRVRIISKDYRRGKLYLKKGEVL 1139
                            G G   KE+     V WL SHIRVRIISKD + GKLYLKKGEV+
Sbjct: 305  ----------------GNGNVGKER----GVQWLRSHIRVRIISKDLKGGKLYLKKGEVV 344

Query: 1138 DVVGPNTCDISLDESKEIIQSVHQDLLETAVPKRGGPVLVLYGKHKGVFGYLVERNMEKE 959
            DVVGP  CDIS+DES+E++QSV QD LETA+P+RGGPVLVLYGKHKG +G LV+R++++E
Sbjct: 345  DVVGPYKCDISMDESRELVQSVDQDALETALPRRGGPVLVLYGKHKGAYGNLVQRDIDRE 404

Query: 958  TGVVQDADSHELLNVHLEQIAEYLGDPDCIGY 863
             GVVQD+ SHELL+V LEQIAEY+GDP  IGY
Sbjct: 405  VGVVQDSGSHELLDVKLEQIAEYVGDPGYIGY 436


>ref|XP_002326591.1| predicted protein [Populus trichocarpa] gi|222833913|gb|EEE72390.1|
            predicted protein [Populus trichocarpa]
          Length = 455

 Score =  209 bits (532), Expect = 2e-51
 Identities = 117/222 (52%), Positives = 147/222 (66%), Gaps = 6/222 (2%)
 Frame = -2

Query: 1510 VVLKLS-SNEEVTVGVQEVAELGTVDDELCVKGLQ-----EEKMRRGGSRDDRRKNERSS 1349
            ++L++  S E V V V +VAELG+ ++E C+K L+     EEK    G R+ R  N+RS 
Sbjct: 256  IILRVEKSGESVKVRVSDVAELGSGEEERCLKELKDLKIKEEKKSSDGDREQRPVNKRSV 315

Query: 1348 YXXXXXXXXXXXXXXXXXXXXSVNGAGYGPSSKEQERSVAVSWLTSHIRVRIISKDYRRG 1169
                                      G G   KE+     V WL SHIRVRIISKD + G
Sbjct: 316  ESRESLII------------------GNGGIVKER----GVQWLRSHIRVRIISKDLKGG 353

Query: 1168 KLYLKKGEVLDVVGPNTCDISLDESKEIIQSVHQDLLETAVPKRGGPVLVLYGKHKGVFG 989
            KLYLKKGEV+DVVGP  CD+S+DES+E++QSV QDLLE A+P+RGGPVLVLYGKH+G +G
Sbjct: 354  KLYLKKGEVVDVVGPYKCDVSMDESRELVQSVDQDLLENALPRRGGPVLVLYGKHRGAYG 413

Query: 988  YLVERNMEKETGVVQDADSHELLNVHLEQIAEYLGDPDCIGY 863
             LV+R++++E GVVQD  SHELLNV LEQIAEY+GDP  IGY
Sbjct: 414  NLVQRDLDREVGVVQDYGSHELLNVKLEQIAEYVGDPSYIGY 455


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