BLASTX nr result

ID: Coptis25_contig00009314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009314
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267126.1| PREDICTED: uncharacterized protein LOC100243...   234   1e-59
ref|XP_002317210.1| predicted protein [Populus trichocarpa] gi|2...   232   5e-59
ref|XP_002518526.1| Tumor suppressor candidate, putative [Ricinu...   224   1e-56
ref|XP_004134751.1| PREDICTED: polyubiquitin-like isoform 3 [Cuc...   220   2e-55
ref|XP_002888069.1| OST3/OST6 family protein [Arabidopsis lyrata...   219   3e-55

>ref|XP_002267126.1| PREDICTED: uncharacterized protein LOC100243455 [Vitis vinifera]
           gi|147770840|emb|CAN74174.1| hypothetical protein
           VITISV_019222 [Vitis vinifera]
          Length = 339

 Score =  234 bits (598), Expect = 1e-59
 Identities = 116/186 (62%), Positives = 152/186 (81%)
 Frame = -3

Query: 559 SDSDLVQELLHLKSQSKSGIIHLNDISLSRFLTSTQTKSRSYSLLIFFDATQLHDKTELH 380
           ++SD V ELL L+S+SKSG+IHL+D SLSRFLTST T  R YS+LIFFDATQLHDK EL+
Sbjct: 23  AESDRVAELLSLQSRSKSGVIHLDDHSLSRFLTSTTTP-RPYSILIFFDATQLHDKPELN 81

Query: 379 LKDLRFEYELVATAFSINNKNTPDETKLFFCDIEFKESQNSFALFGVNALPHIRHVGPRV 200
           L+ LR E+ L+A++F  NNK++P  +KLFFCDIEFKESQ+SFA FG+ +LPHIR VGP V
Sbjct: 82  LQGLRSEFGLLASSFISNNKDSPSASKLFFCDIEFKESQSSFAQFGITSLPHIRLVGPDV 141

Query: 199 RNLKDSEAMDQGDFARMAESMSEFVQSKTGLTVGPVQRPPFMSSKQIGVIVIGVLLSTPF 20
           ++LKDSE M+QGD +RMA+SMS+FV+S+T L+VGP++RPP  S KQ+G  V   L+  PF
Sbjct: 142 KSLKDSEQMEQGDISRMADSMSDFVESRTKLSVGPIKRPPMFSKKQLGFFVAAFLVWAPF 201

Query: 19  FIKRIM 2
            +K+++
Sbjct: 202 VVKKVL 207


>ref|XP_002317210.1| predicted protein [Populus trichocarpa] gi|222860275|gb|EEE97822.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score =  232 bits (592), Expect = 5e-59
 Identities = 117/183 (63%), Positives = 149/183 (81%)
 Frame = -3

Query: 550 DLVQELLHLKSQSKSGIIHLNDISLSRFLTSTQTKSRSYSLLIFFDATQLHDKTELHLKD 371
           DLV ELL+L+SQSKSG+IHLND  +SRFLTST+T  R Y+LLIFFDA  LH KTELHL+D
Sbjct: 1   DLVTELLYLRSQSKSGVIHLNDHIVSRFLTSTKTP-RPYTLLIFFDAKHLHSKTELHLQD 59

Query: 370 LRFEYELVATAFSINNKNTPDETKLFFCDIEFKESQNSFALFGVNALPHIRHVGPRVRNL 191
           L  E+ L++++F I+N +    + LFFCD+EFKESQNSFALFGVN+LPHIR VGP V+N 
Sbjct: 60  LHTEFSLLSSSF-ISNNDASSASSLFFCDVEFKESQNSFALFGVNSLPHIRLVGPNVKNP 118

Query: 190 KDSEAMDQGDFARMAESMSEFVQSKTGLTVGPVQRPPFMSSKQIGVIVIGVLLSTPFFIK 11
           KDSE MDQGDF+RMAESM+EFV+S+T LTVGP+ RPP +S+ QI  + + +L+   FFIK
Sbjct: 119 KDSEQMDQGDFSRMAESMAEFVESRTKLTVGPINRPPMLSTNQIAFLGVILLIWAFFFIK 178

Query: 10  RIM 2
           +++
Sbjct: 179 KLL 181


>ref|XP_002518526.1| Tumor suppressor candidate, putative [Ricinus communis]
           gi|223542371|gb|EEF43913.1| Tumor suppressor candidate,
           putative [Ricinus communis]
          Length = 349

 Score =  224 bits (571), Expect = 1e-56
 Identities = 114/185 (61%), Positives = 148/185 (80%), Gaps = 2/185 (1%)
 Frame = -3

Query: 550 DLVQELLHLKSQSKSGIIHLNDISLSRFLTSTQTKSRSYSLLIFFDATQLHDKTELHLKD 371
           DLV ELL L+SQS +G+IHLND S+SRFLTST+T  R YSLLIFFDA QLH+K ELHL+D
Sbjct: 34  DLVTELLSLQSQSSTGVIHLNDHSISRFLTSTKTP-RPYSLLIFFDAKQLHEKAELHLQD 92

Query: 370 LRFEYELVATAFSINNKNTPDET--KLFFCDIEFKESQNSFALFGVNALPHIRHVGPRVR 197
           L  E+ LVA++F  NN +    +  KLFFCDIEFKESQ++F+LFGVN+LPHIR V P V+
Sbjct: 93  LHHEFSLVASSFINNNADQSSASYGKLFFCDIEFKESQSTFSLFGVNSLPHIRLVNPNVK 152

Query: 196 NLKDSEAMDQGDFARMAESMSEFVQSKTGLTVGPVQRPPFMSSKQIGVIVIGVLLSTPFF 17
           N KDS+AMDQGDF+RMAESMS+F++S+T L+VGP+ RPP +S  Q+   ++ +L+  PF 
Sbjct: 153 NPKDSDAMDQGDFSRMAESMSDFIESRTKLSVGPIHRPPPISRNQMISAIVCLLIWMPFM 212

Query: 16  IKRIM 2
           IK+++
Sbjct: 213 IKKLL 217


>ref|XP_004134751.1| PREDICTED: polyubiquitin-like isoform 3 [Cucumis sativus]
          Length = 344

 Score =  220 bits (560), Expect = 2e-55
 Identities = 112/190 (58%), Positives = 148/190 (77%), Gaps = 2/190 (1%)
 Frame = -3

Query: 565 TESDSDLVQELLHLKSQSKSGIIHLNDISLSRFLTSTQTKSRSYSLLIFFDATQLHDKTE 386
           + SDSD V ELL L+S+S SG+IHL+D S+SRFLT T    R YSLLIFFDA QLHDK+E
Sbjct: 25  SSSDSDRVAELLDLQSRSPSGVIHLDDQSVSRFLT-TPKSPRPYSLLIFFDALQLHDKSE 83

Query: 385 LHLKDLRFEYELVATAFSINNKN--TPDETKLFFCDIEFKESQNSFALFGVNALPHIRHV 212
           LHLK+LR E+ LV+++F  NN +  +P  +KLFFC+IEFK+SQ SF+LFGVNALPH+R +
Sbjct: 84  LHLKELRHEFGLVSSSFIANNPDPSSPSRSKLFFCEIEFKQSQPSFSLFGVNALPHVRLI 143

Query: 211 GPRVRNLKDSEAMDQGDFARMAESMSEFVQSKTGLTVGPVQRPPFMSSKQIGVIVIGVLL 32
           GP  +  K S+ MDQ D++R+AESM+EFV+SKT L VGP+QRPP  S  Q+ V+ I +L+
Sbjct: 144 GPN-QTPKKSDQMDQSDYSRLAESMAEFVESKTSLVVGPIQRPPMFSKNQLVVLFIAMLI 202

Query: 31  STPFFIKRIM 2
           S PF +K+++
Sbjct: 203 SAPFALKKVI 212


>ref|XP_002888069.1| OST3/OST6 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333910|gb|EFH64328.1| OST3/OST6 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 346

 Score =  219 bits (559), Expect = 3e-55
 Identities = 111/189 (58%), Positives = 148/189 (78%), Gaps = 1/189 (0%)
 Frame = -3

Query: 565 TESDSDLVQELLHLKSQSKSGIIHLNDISLSRFLTSTQTKSRSYSLLIFFDATQLHDKTE 386
           ++SDSDL+ EL+ L+S S+SG+IHL+D  +S+FLTS  T  R YSLL+FFDATQLH K E
Sbjct: 28  SDSDSDLLNELVSLRSTSESGVIHLDDHGISKFLTSASTP-RPYSLLVFFDATQLHSKNE 86

Query: 385 LHLKDLRFEYELVATAFSINNKNTPDETKLFFCDIEFKESQNSFALFGVNALPHIRHVGP 206
           L L++LR E+ +V+ +F  NN N  + TKLFFC+IEF +SQ+SF LFGVNALPHIR V P
Sbjct: 87  LRLQELRREFGIVSASFLANN-NGSEGTKLFFCEIEFSQSQSSFQLFGVNALPHIRLVSP 145

Query: 205 RVRNLKD-SEAMDQGDFARMAESMSEFVQSKTGLTVGPVQRPPFMSSKQIGVIVIGVLLS 29
            + NL+D S  MDQ D++R+AESM+EFV+ +T L VGP+QRPP +S  QIGVIV  ++++
Sbjct: 146 SISNLRDESGQMDQSDYSRLAESMAEFVEQRTKLKVGPIQRPPLLSKPQIGVIVALIVIA 205

Query: 28  TPFFIKRIM 2
           TPF IKR++
Sbjct: 206 TPFIIKRVL 214


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