BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009313
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144195.1| PREDICTED: putative ribosome biogenesis GTPa...   191   1e-46
emb|CBI27627.3| unnamed protein product [Vitis vinifera]              189   4e-46
ref|XP_002279434.1| PREDICTED: putative ribosome biogenesis GTPa...   189   4e-46
ref|XP_002514929.1| GTP binding protein, putative [Ricinus commu...   187   2e-45
ref|XP_003538555.1| PREDICTED: putative ribosome biogenesis GTPa...   185   1e-44

>ref|XP_004144195.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Cucumis
           sativus] gi|449489232|ref|XP_004158254.1| PREDICTED:
           putative ribosome biogenesis GTPase RsgA-like [Cucumis
           sativus]
          Length = 504

 Score =  191 bits (486), Expect = 1e-46
 Identities = 89/106 (83%), Positives = 98/106 (92%)
 Frame = +1

Query: 1   KKSLAQMFPEIRKMLSTNDPAKCSFSDCLHLGEPGCVVKGDWERYAYYLQLLDEIKIREE 180
           K+SLAQ FPEI+KML  ++PAKCSF+DCLHLGEPGCV+KGDWERY YY QLLDEI+IREE
Sbjct: 370 KQSLAQAFPEIQKMLHASEPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQLLDEIRIREE 429

Query: 181 FQLRTLGTKRESDVRYKVGDMGVKQAEPRLELKKHRRQSRKRINQS 318
           FQLRT GTKRE DVR KVG+MGVKQAEPRLELKKHRRQSRKR+NQS
Sbjct: 430 FQLRTFGTKREGDVRIKVGEMGVKQAEPRLELKKHRRQSRKRVNQS 475


>emb|CBI27627.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  189 bits (481), Expect = 4e-46
 Identities = 92/107 (85%), Positives = 97/107 (90%), Gaps = 2/107 (1%)
 Frame = +1

Query: 4   KSLAQMFPEIRKMLS--TNDPAKCSFSDCLHLGEPGCVVKGDWERYAYYLQLLDEIKIRE 177
           +SLAQ FPEIRK+LS   N+P KCSF+DCLHLGEPGCVVKGDWERY YY QLLDEIKIRE
Sbjct: 263 QSLAQTFPEIRKLLSGSANEPEKCSFNDCLHLGEPGCVVKGDWERYPYYFQLLDEIKIRE 322

Query: 178 EFQLRTLGTKRESDVRYKVGDMGVKQAEPRLELKKHRRQSRKRINQS 318
           EFQLRTLGTKRE DVRYK GDMGVKQAEPRLE KKHRRQSRKR+NQS
Sbjct: 323 EFQLRTLGTKREGDVRYKTGDMGVKQAEPRLEPKKHRRQSRKRMNQS 369


>ref|XP_002279434.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like isoform 3
           [Vitis vinifera]
          Length = 491

 Score =  189 bits (481), Expect = 4e-46
 Identities = 92/107 (85%), Positives = 97/107 (90%), Gaps = 2/107 (1%)
 Frame = +1

Query: 4   KSLAQMFPEIRKMLS--TNDPAKCSFSDCLHLGEPGCVVKGDWERYAYYLQLLDEIKIRE 177
           +SLAQ FPEIRK+LS   N+P KCSF+DCLHLGEPGCVVKGDWERY YY QLLDEIKIRE
Sbjct: 354 QSLAQTFPEIRKLLSGSANEPEKCSFNDCLHLGEPGCVVKGDWERYPYYFQLLDEIKIRE 413

Query: 178 EFQLRTLGTKRESDVRYKVGDMGVKQAEPRLELKKHRRQSRKRINQS 318
           EFQLRTLGTKRE DVRYK GDMGVKQAEPRLE KKHRRQSRKR+NQS
Sbjct: 414 EFQLRTLGTKREGDVRYKTGDMGVKQAEPRLEPKKHRRQSRKRMNQS 460


>ref|XP_002514929.1| GTP binding protein, putative [Ricinus communis]
           gi|223545980|gb|EEF47483.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 500

 Score =  187 bits (476), Expect = 2e-45
 Identities = 87/106 (82%), Positives = 98/106 (92%)
 Frame = +1

Query: 1   KKSLAQMFPEIRKMLSTNDPAKCSFSDCLHLGEPGCVVKGDWERYAYYLQLLDEIKIREE 180
           K+SLA+ FPEI+KMLS+  PAKCSF+DCLHLGEPGC+V GDWERY++Y QLLDEI+IREE
Sbjct: 364 KQSLAETFPEIQKMLSSGGPAKCSFNDCLHLGEPGCIVNGDWERYSFYFQLLDEIRIREE 423

Query: 181 FQLRTLGTKRESDVRYKVGDMGVKQAEPRLELKKHRRQSRKRINQS 318
           FQLRT GTK+E DVRYKVGDMGV+QAEPRLE KKHRRQSRKRINQS
Sbjct: 424 FQLRTYGTKKEGDVRYKVGDMGVQQAEPRLEPKKHRRQSRKRINQS 469


>ref|XP_003538555.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Glycine
           max]
          Length = 475

 Score =  185 bits (469), Expect = 1e-44
 Identities = 87/106 (82%), Positives = 96/106 (90%)
 Frame = +1

Query: 1   KKSLAQMFPEIRKMLSTNDPAKCSFSDCLHLGEPGCVVKGDWERYAYYLQLLDEIKIREE 180
           K+SLAQ FPEIRKMLS N+  KCSF++CLHLGEPGC+VKGDWERY+YY QLLDEI+IREE
Sbjct: 343 KQSLAQTFPEIRKMLSANETEKCSFNNCLHLGEPGCIVKGDWERYSYYFQLLDEIRIREE 402

Query: 181 FQLRTLGTKRESDVRYKVGDMGVKQAEPRLELKKHRRQSRKRINQS 318
           FQLRT GTKRE DVR K+GDMGV+QAEPRLE KKHRRQSRK INQS
Sbjct: 403 FQLRTFGTKREGDVRLKMGDMGVQQAEPRLEPKKHRRQSRKSINQS 448