BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009308
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28799.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002268685.1| PREDICTED: uncharacterized protein LOC100261...   110   2e-22
emb|CAN79186.1| hypothetical protein VITISV_035853 [Vitis vinifera]   110   2e-22
ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communi...   100   1e-19
ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago t...    98   6e-19

>emb|CBI28799.3| unnamed protein product [Vitis vinifera]
          Length = 935

 Score =  110 bits (274), Expect = 2e-22
 Identities = 59/103 (57%), Positives = 67/103 (65%)
 Frame = -3

Query: 310 LCMWRDLMARVHDESLRYVLSDQAIVAVASKVPTTAIEIYDTISEADLDVEFLXXXXXXX 131
           LC WRDLMARVHDESLRYVLSDQAI+A+A KVPTT  EI   IS+ADL+V+ L       
Sbjct: 356 LCTWRDLMARVHDESLRYVLSDQAIIALADKVPTTQKEICTLISQADLNVDSLSSSSILP 415

Query: 130 XXXXXXXSHLEDICDLLAGKISNLGNVFQTLPQKHLGPSGCCP 2
                  SHLED   L   K+  L +VF  + QKHLGP G CP
Sbjct: 416 SPSPVVCSHLEDFNYLFQDKMGKLDDVFLEILQKHLGPDGSCP 458


>ref|XP_002268685.1| PREDICTED: uncharacterized protein LOC100261955 [Vitis vinifera]
          Length = 936

 Score =  110 bits (274), Expect = 2e-22
 Identities = 59/103 (57%), Positives = 67/103 (65%)
 Frame = -3

Query: 310 LCMWRDLMARVHDESLRYVLSDQAIVAVASKVPTTAIEIYDTISEADLDVEFLXXXXXXX 131
           LC WRDLMARVHDESLRYVLSDQAI+A+A KVPTT  EI   IS+ADL+V+ L       
Sbjct: 354 LCTWRDLMARVHDESLRYVLSDQAIIALADKVPTTQKEICTLISQADLNVDSLSSSSILP 413

Query: 130 XXXXXXXSHLEDICDLLAGKISNLGNVFQTLPQKHLGPSGCCP 2
                  SHLED   L   K+  L +VF  + QKHLGP G CP
Sbjct: 414 SPSPVVCSHLEDFNYLFQDKMGKLDDVFLEILQKHLGPDGSCP 456


>emb|CAN79186.1| hypothetical protein VITISV_035853 [Vitis vinifera]
          Length = 951

 Score =  110 bits (274), Expect = 2e-22
 Identities = 59/103 (57%), Positives = 67/103 (65%)
 Frame = -3

Query: 310 LCMWRDLMARVHDESLRYVLSDQAIVAVASKVPTTAIEIYDTISEADLDVEFLXXXXXXX 131
           LC WRDLMARVHDESLRYVLSDQAI+A+A KVPTT  EI   IS+ADL+V+ L       
Sbjct: 327 LCTWRDLMARVHDESLRYVLSDQAIIALADKVPTTQKEICTLISQADLNVDSLSSSSILP 386

Query: 130 XXXXXXXSHLEDICDLLAGKISNLGNVFQTLPQKHLGPSGCCP 2
                  SHLED   L   K+  L +VF  + QKHLGP G CP
Sbjct: 387 SPSPVVCSHLEDFNYLFQDKMGKLDDVFLEILQKHLGPDGSCP 429


>ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communis]
           gi|223536557|gb|EEF38203.1| 3'-5' exonuclease, putative
           [Ricinus communis]
          Length = 977

 Score =  100 bits (249), Expect = 1e-19
 Identities = 53/103 (51%), Positives = 69/103 (66%)
 Frame = -3

Query: 310 LCMWRDLMARVHDESLRYVLSDQAIVAVASKVPTTAIEIYDTISEADLDVEFLXXXXXXX 131
           LC WR+LMARVHDE LR+VLSDQAIV++A+KV T A+EIYDTI++AD +++ +       
Sbjct: 364 LCTWRELMARVHDEGLRFVLSDQAIVSLANKVSTNAMEIYDTIAQAD-NMDPMNCISSQP 422

Query: 130 XXXXXXXSHLEDICDLLAGKISNLGNVFQTLPQKHLGPSGCCP 2
                  SH  D C L+    SNL ++F  L QK LGP+G CP
Sbjct: 423 SPSPVVCSHFYDFCCLIQENKSNLDDIFSLLLQKCLGPNGSCP 465


>ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
           gi|355506989|gb|AES88131.1| Exosome complex exonuclease
           RRP6 [Medicago truncatula]
          Length = 974

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/102 (50%), Positives = 68/102 (66%)
 Frame = -3

Query: 310 LCMWRDLMARVHDESLRYVLSDQAIVAVASKVPTTAIEIYDTISEADLDVEFLXXXXXXX 131
           LC WRDLMAR+HDESL+YVLSDQAIVA+AS++P +  EIY++I + D++ E         
Sbjct: 399 LCTWRDLMARIHDESLKYVLSDQAIVALASRLPASNSEIYNSIVQTDVNAE-TGLSSSIP 457

Query: 130 XXXXXXXSHLEDICDLLAGKISNLGNVFQTLPQKHLGPSGCC 5
                  SHL DIC LLA K+ N G+++  + QK LG +G C
Sbjct: 458 SPSPVVCSHLTDICHLLANKLVNHGDIYSVILQKCLGQNGNC 499