BLASTX nr result
ID: Coptis25_contig00009294
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00009294 (303 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABR16132.1| unknown [Picea sitchensis] 49 1e-10 ref|XP_002978447.1| hypothetical protein SELMODRAFT_109026 [Sela... 49 2e-10 ref|XP_002970284.1| hypothetical protein SELMODRAFT_147068 [Sela... 49 2e-10 ref|XP_002978280.1| hypothetical protein SELMODRAFT_418040 [Sela... 49 4e-10 ref|XP_003569596.1| PREDICTED: DNA repair helicase XPB2-like [Br... 47 1e-09 >gb|ABR16132.1| unknown [Picea sitchensis] Length = 772 Score = 48.9 bits (115), Expect(2) = 1e-10 Identities = 21/23 (91%), Positives = 22/23 (95%) Frame = +2 Query: 2 ALYVMNPNKFRACEFLIQFHEPQ 70 ALYVMNPNKFRACEFLI+FHE Q Sbjct: 502 ALYVMNPNKFRACEFLIRFHEQQ 524 Score = 42.0 bits (97), Expect(2) = 1e-10 Identities = 21/27 (77%), Positives = 23/27 (85%) Frame = +1 Query: 76 TNHQERTRILLHTFKKSPDVNTVFLSK 156 T+H ERTRIL + FK SPDVNTVFLSK Sbjct: 555 TSHSERTRIL-YAFKHSPDVNTVFLSK 580 >ref|XP_002978447.1| hypothetical protein SELMODRAFT_109026 [Selaginella moellendorffii] gi|300153796|gb|EFJ20433.1| hypothetical protein SELMODRAFT_109026 [Selaginella moellendorffii] Length = 733 Score = 48.9 bits (115), Expect(2) = 2e-10 Identities = 21/23 (91%), Positives = 22/23 (95%) Frame = +2 Query: 2 ALYVMNPNKFRACEFLIQFHEPQ 70 ALYVMNPNKFRACEFLI+FHE Q Sbjct: 467 ALYVMNPNKFRACEFLIRFHEQQ 489 Score = 40.8 bits (94), Expect(2) = 2e-10 Identities = 20/27 (74%), Positives = 23/27 (85%) Frame = +1 Query: 76 TNHQERTRILLHTFKKSPDVNTVFLSK 156 T+H ERT+IL + FK SPDVNTVFLSK Sbjct: 520 TSHHERTKIL-YAFKHSPDVNTVFLSK 545 >ref|XP_002970284.1| hypothetical protein SELMODRAFT_147068 [Selaginella moellendorffii] gi|300161800|gb|EFJ28414.1| hypothetical protein SELMODRAFT_147068 [Selaginella moellendorffii] Length = 713 Score = 48.9 bits (115), Expect(2) = 2e-10 Identities = 21/23 (91%), Positives = 22/23 (95%) Frame = +2 Query: 2 ALYVMNPNKFRACEFLIQFHEPQ 70 ALYVMNPNKFRACEFLI+FHE Q Sbjct: 447 ALYVMNPNKFRACEFLIRFHEQQ 469 Score = 40.8 bits (94), Expect(2) = 2e-10 Identities = 20/27 (74%), Positives = 23/27 (85%) Frame = +1 Query: 76 TNHQERTRILLHTFKKSPDVNTVFLSK 156 T+H ERT+IL + FK SPDVNTVFLSK Sbjct: 500 TSHHERTKIL-YAFKHSPDVNTVFLSK 525 >ref|XP_002978280.1| hypothetical protein SELMODRAFT_418040 [Selaginella moellendorffii] gi|300154301|gb|EFJ20937.1| hypothetical protein SELMODRAFT_418040 [Selaginella moellendorffii] Length = 747 Score = 48.5 bits (114), Expect(2) = 4e-10 Identities = 20/23 (86%), Positives = 22/23 (95%) Frame = +2 Query: 2 ALYVMNPNKFRACEFLIQFHEPQ 70 ALYVMNPNKFRACEFL++FHE Q Sbjct: 480 ALYVMNPNKFRACEFLVRFHEQQ 502 Score = 40.4 bits (93), Expect(2) = 4e-10 Identities = 19/27 (70%), Positives = 23/27 (85%) Frame = +1 Query: 76 TNHQERTRILLHTFKKSPDVNTVFLSK 156 T+H ERT+IL + FK SPDVNT+FLSK Sbjct: 533 TSHHERTKIL-YAFKHSPDVNTIFLSK 558 >ref|XP_003569596.1| PREDICTED: DNA repair helicase XPB2-like [Brachypodium distachyon] Length = 766 Score = 47.4 bits (111), Expect(2) = 1e-09 Identities = 20/22 (90%), Positives = 21/22 (95%) Frame = +2 Query: 5 LYVMNPNKFRACEFLIQFHEPQ 70 LYVMNPNKFRACEFLI+FHE Q Sbjct: 503 LYVMNPNKFRACEFLIRFHEQQ 524 Score = 40.0 bits (92), Expect(2) = 1e-09 Identities = 20/27 (74%), Positives = 23/27 (85%) Frame = +1 Query: 76 TNHQERTRILLHTFKKSPDVNTVFLSK 156 T+H ERTRIL + FK SP+VNTVFLSK Sbjct: 555 TSHAERTRIL-YQFKNSPEVNTVFLSK 580