BLASTX nr result

ID: Coptis25_contig00009292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009292
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312547.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002517079.1| calmodulin binding protein, putative [Ricinu...    87   2e-15
emb|CBI26300.3| unnamed protein product [Vitis vinifera]               84   9e-15
ref|XP_002265460.1| PREDICTED: protein IQ-DOMAIN 14-like [Vitis ...    84   9e-15
emb|CAN66770.1| hypothetical protein VITISV_013810 [Vitis vinifera]    84   9e-15

>ref|XP_002312547.1| predicted protein [Populus trichocarpa] gi|222852367|gb|EEE89914.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 59/123 (47%), Positives = 69/123 (56%)
 Frame = -1

Query: 373 VSSCNDAVMAAGQPAPAVTQLXXXXXXXXXXXXXXXXXXXXXXXRGYLARKALCALKGLV 194
           +++  DA MAA Q A AV +L                       R YLARKALCALKGLV
Sbjct: 74  MAAAADAAMAAAQAAAAVIRLTTATSRRNSTIEEDAAVKIQSVFRSYLARKALCALKGLV 133

Query: 193 KLQALVRGYLVRKQAARTLRCMQSLVIVXXXXXXXXXQMAEETHLLAQRSSNYRNLLQAN 14
           KLQALVRG+LVRKQA  TLRCMQ+LV V          MAE+    +QR+S +R   Q N
Sbjct: 134 KLQALVRGHLVRKQATATLRCMQALVNVQTRARAQRIWMAEDVK-PSQRNSIHRKSTQEN 192

Query: 13  HIR 5
            IR
Sbjct: 193 RIR 195


>ref|XP_002517079.1| calmodulin binding protein, putative [Ricinus communis]
           gi|223543714|gb|EEF45242.1| calmodulin binding protein,
           putative [Ricinus communis]
          Length = 455

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 56/131 (42%), Positives = 72/131 (54%)
 Frame = -1

Query: 397 SVSISVAFVSSCNDAVMAAGQPAPAVTQLXXXXXXXXXXXXXXXXXXXXXXXRGYLARKA 218
           +++++ A V++  DA +AA Q A  V +L                       R YLARKA
Sbjct: 93  AMAMAAATVAAA-DAAVAAAQAAAVVIRLTAAAKKRNSAIEEVAAIKIQAFFRSYLARKA 151

Query: 217 LCALKGLVKLQALVRGYLVRKQAARTLRCMQSLVIVXXXXXXXXXQMAEETHLLAQRSSN 38
           LCALKGLVKLQALVRG+LVRKQA  TLRCMQ+LV           +MAE+ +   Q+ S 
Sbjct: 152 LCALKGLVKLQALVRGHLVRKQATTTLRCMQALVTAQARARAQRIRMAEDGNPATQKQSI 211

Query: 37  YRNLLQANHIR 5
           +R   Q N  R
Sbjct: 212 HRRSTQDNRFR 222


>emb|CBI26300.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 56/125 (44%), Positives = 64/125 (51%)
 Frame = -1

Query: 379 AFVSSCNDAVMAAGQPAPAVTQLXXXXXXXXXXXXXXXXXXXXXXXRGYLARKALCALKG 200
           A  ++   A +AA Q A AV +L                       R +LARKALCALKG
Sbjct: 101 AATAAAAGAAVAAAQAAAAVIRLTAAATGRAGAIEEAAAVKIQAAFRAHLARKALCALKG 160

Query: 199 LVKLQALVRGYLVRKQAARTLRCMQSLVIVXXXXXXXXXQMAEETHLLAQRSSNYRNLLQ 20
           LVKLQALVRG LVRKQA  TLRCMQ+LV V         +M EET  + QR    R   Q
Sbjct: 161 LVKLQALVRGNLVRKQATATLRCMQALVTVQARARVQRIRMTEETKPVNQRQLTQRKSTQ 220

Query: 19  ANHIR 5
            N  R
Sbjct: 221 DNRFR 225


>ref|XP_002265460.1| PREDICTED: protein IQ-DOMAIN 14-like [Vitis vinifera]
          Length = 464

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 56/125 (44%), Positives = 64/125 (51%)
 Frame = -1

Query: 379 AFVSSCNDAVMAAGQPAPAVTQLXXXXXXXXXXXXXXXXXXXXXXXRGYLARKALCALKG 200
           A  ++   A +AA Q A AV +L                       R +LARKALCALKG
Sbjct: 101 AATAAAAGAAVAAAQAAAAVIRLTAAATGRAGAIEEAAAVKIQAAFRAHLARKALCALKG 160

Query: 199 LVKLQALVRGYLVRKQAARTLRCMQSLVIVXXXXXXXXXQMAEETHLLAQRSSNYRNLLQ 20
           LVKLQALVRG LVRKQA  TLRCMQ+LV V         +M EET  + QR    R   Q
Sbjct: 161 LVKLQALVRGNLVRKQATATLRCMQALVTVQARARVQRIRMTEETKPVNQRQLTQRKSTQ 220

Query: 19  ANHIR 5
            N  R
Sbjct: 221 DNRFR 225


>emb|CAN66770.1| hypothetical protein VITISV_013810 [Vitis vinifera]
          Length = 570

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 56/125 (44%), Positives = 64/125 (51%)
 Frame = -1

Query: 379 AFVSSCNDAVMAAGQPAPAVTQLXXXXXXXXXXXXXXXXXXXXXXXRGYLARKALCALKG 200
           A  ++   A +AA Q A AV +L                       R +LARKALCALKG
Sbjct: 101 AATAAAAGAAVAAAQAAAAVIRLTAAATGRAGAIEEAAAVKIQAAFRAHLARKALCALKG 160

Query: 199 LVKLQALVRGYLVRKQAARTLRCMQSLVIVXXXXXXXXXQMAEETHLLAQRSSNYRNLLQ 20
           LVKLQALVRG LVRKQA  TLRCMQ+LV V         +M EET  + QR    R   Q
Sbjct: 161 LVKLQALVRGNLVRKQATATLRCMQALVTVQARARVQRIRMTEETKPVNQRQLTQRKSTQ 220

Query: 19  ANHIR 5
            N  R
Sbjct: 221 DNRFR 225


Top