BLASTX nr result

ID: Coptis25_contig00009259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009259
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528055.1| conserved hypothetical protein [Ricinus comm...    81   1e-13
ref|XP_003553943.1| PREDICTED: uncharacterized protein LOC100797...    78   7e-13
ref|XP_002268349.1| PREDICTED: uncharacterized protein LOC100256...    76   2e-12
ref|XP_003549137.1| PREDICTED: uncharacterized protein LOC100527...    72   5e-11
gb|AFK42508.1| unknown [Lotus japonicus]                               69   3e-10

>ref|XP_002528055.1| conserved hypothetical protein [Ricinus communis]
           gi|223532516|gb|EEF34305.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 76

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 44/76 (57%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
 Frame = +1

Query: 91  MALTNFIITXXXXXXXXXXXRSDVKQSVGIFRRNVKHIRTWLXXXXXXXXXXXXNIKPKE 270
           M LTNFIIT           RSDVKQS  IFRRNVKHIR W               KPKE
Sbjct: 1   MGLTNFIITVAGVSAVVLLLRSDVKQSAAIFRRNVKHIRNWFEEETAASSKASEKAKPKE 60

Query: 271 LDSKIP-KDIPKEDKH 315
           L+SKIP KDIPKEDKH
Sbjct: 61  LESKIPQKDIPKEDKH 76


>ref|XP_003553943.1| PREDICTED: uncharacterized protein LOC100797786 [Glycine max]
          Length = 76

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 41/76 (53%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
 Frame = +1

Query: 91  MALTNFIITXXXXXXXXXXXRSDVKQSVGIFRRNVKHIRTWLXXXXXXXXXXXXNIKPKE 270
           M LTNF++T           RSDVKQS  IFRRNVKHIR WL               PKE
Sbjct: 1   MGLTNFVLTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRNWLEEESAASSKTMEKSTPKE 60

Query: 271 LDSKI-PKDIPKEDKH 315
           L+SK+ PKDIPKEDKH
Sbjct: 61  LESKVPPKDIPKEDKH 76


>ref|XP_002268349.1| PREDICTED: uncharacterized protein LOC100256861 [Vitis vinifera]
           gi|147843005|emb|CAN83318.1| hypothetical protein
           VITISV_023581 [Vitis vinifera]
           gi|297744362|emb|CBI37332.3| unnamed protein product
           [Vitis vinifera]
          Length = 76

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 41/75 (54%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = +1

Query: 91  MALTNFIITXXXXXXXXXXXRSDVKQSVGIFRRNVKHIRTWLXXXXXXXXXXXXNIKPKE 270
           MALTNFIIT           RSDVKQS  IFRRNV+HIR WL              KPKE
Sbjct: 1   MALTNFIITVAGVSAVILLLRSDVKQSASIFRRNVRHIRNWLEEESASASKATEKAKPKE 60

Query: 271 LDSKIP-KDIPKEDK 312
           L+S++P K+IPKEDK
Sbjct: 61  LESQVPQKEIPKEDK 75


>ref|XP_003549137.1| PREDICTED: uncharacterized protein LOC100527096 [Glycine max]
          Length = 77

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/75 (49%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
 Frame = +1

Query: 91  MALTNFIITXXXXXXXXXXXRSDVKQSVGIFRRNVKHIRTWLXXXXXXXXXXXXNIKPKE 270
           M LTNF++T           RSDV+QS  +FRRNVKHIR WL               PKE
Sbjct: 1   MGLTNFVLTVAGVSAVVLLLRSDVRQSASVFRRNVKHIRNWLEEETAATSKTMEKSTPKE 60

Query: 271 LDSKI-PKDIPKEDK 312
            +SK+ PKDIPKEDK
Sbjct: 61  FESKVPPKDIPKEDK 75


>gb|AFK42508.1| unknown [Lotus japonicus]
          Length = 75

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/76 (50%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = +1

Query: 91  MALTNFIITXXXXXXXXXXXRSDVKQSVGIFRRNVKHIRTWLXXXXXXXXXXXXNIKPKE 270
           M +TNF++T           RSDVKQS  IFRRNVKHIR WL                KE
Sbjct: 1   MGITNFVLTVAGVSAVVLLLRSDVKQSASIFRRNVKHIRKWLEEENISSSKTVEK-STKE 59

Query: 271 LDSKI-PKDIPKEDKH 315
           L++K+ PKDIPKEDKH
Sbjct: 60  LETKVPPKDIPKEDKH 75


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