BLASTX nr result

ID: Coptis25_contig00009219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009219
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ84452.1| unknown [Medicago truncatula]                          100   9e-20
ref|XP_003519043.1| PREDICTED: LOW QUALITY PROTEIN: protein kina...   100   1e-19
ref|XP_003517946.1| PREDICTED: LOW QUALITY PROTEIN: protein kina...   100   1e-19
ref|XP_002315799.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002311169.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19

>gb|ACJ84452.1| unknown [Medicago truncatula]
          Length = 272

 Score =  100 bits (250), Expect = 9e-20
 Identities = 49/79 (62%), Positives = 56/79 (70%)
 Frame = -3

Query: 238 GWIDQHNLTPTKPGTGVTVAVKMHKPGSCQLGLGKLLTEKRSLGHLYHPNLVSLVGYCLE 59
           GWID+H L PTKPGTG  +AVK     S Q G  + LTE   LG L+HPNLV L+GYCLE
Sbjct: 93  GWIDEHTLAPTKPGTGFVIAVKRLNQESSQ-GHSEWLTEINYLGQLHHPNLVKLIGYCLE 151

Query: 58  DGNSVLVYEFVPRGSLDNH 2
           D   +LVYEFV +GSLDNH
Sbjct: 152 DDYRILVYEFVTKGSLDNH 170


>ref|XP_003519043.1| PREDICTED: LOW QUALITY PROTEIN: protein kinase 2B,
           chloroplastic-like [Glycine max]
          Length = 414

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/79 (60%), Positives = 58/79 (73%)
 Frame = -3

Query: 238 GWIDQHNLTPTKPGTGVTVAVKMHKPGSCQLGLGKLLTEKRSLGHLYHPNLVSLVGYCLE 59
           GWID+H  T +KPG+G+ VAVK  KP   Q G  + LTE   LG LYHPNLV L+GYCLE
Sbjct: 94  GWIDEHTFTASKPGSGMVVAVKRLKPEGFQ-GHKEWLTEVNYLGQLYHPNLVKLIGYCLE 152

Query: 58  DGNSVLVYEFVPRGSLDNH 2
             N +LVYEF+P+GSL+NH
Sbjct: 153 GENRLLVYEFMPKGSLENH 171


>ref|XP_003517946.1| PREDICTED: LOW QUALITY PROTEIN: protein kinase 2B,
           chloroplastic-like [Glycine max]
          Length = 422

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/79 (60%), Positives = 58/79 (73%)
 Frame = -3

Query: 238 GWIDQHNLTPTKPGTGVTVAVKMHKPGSCQLGLGKLLTEKRSLGHLYHPNLVSLVGYCLE 59
           GWID+H  T +KPG+G+ VAVK  KP   Q G  + LTE   LG LYHPNLV L+GYCLE
Sbjct: 94  GWIDEHTFTASKPGSGMVVAVKRLKPEGFQ-GHKEWLTEVNYLGQLYHPNLVKLIGYCLE 152

Query: 58  DGNSVLVYEFVPRGSLDNH 2
             N +LVYEF+P+GSL+NH
Sbjct: 153 GENRLLVYEFMPKGSLENH 171


>ref|XP_002315799.1| predicted protein [Populus trichocarpa] gi|222864839|gb|EEF01970.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/79 (60%), Positives = 58/79 (73%)
 Frame = -3

Query: 238 GWIDQHNLTPTKPGTGVTVAVKMHKPGSCQLGLGKLLTEKRSLGHLYHPNLVSLVGYCLE 59
           GWID+H LT  KPG+G+ VAVK  KP   Q G  + LTE   LG L+HPNLV L+GYCLE
Sbjct: 99  GWIDEHTLTAAKPGSGMVVAVKKLKPEGFQ-GHKEWLTEVNYLGQLHHPNLVKLIGYCLE 157

Query: 58  DGNSVLVYEFVPRGSLDNH 2
             N +LVYEF+P+GSL+NH
Sbjct: 158 GENRLLVYEFMPKGSLENH 176


>ref|XP_002311169.1| predicted protein [Populus trichocarpa] gi|222850989|gb|EEE88536.1|
           predicted protein [Populus trichocarpa]
          Length = 368

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/79 (59%), Positives = 58/79 (73%)
 Frame = -3

Query: 238 GWIDQHNLTPTKPGTGVTVAVKMHKPGSCQLGLGKLLTEKRSLGHLYHPNLVSLVGYCLE 59
           GWID+H+LT  KPGTG+ +AVK     S Q G  + L E   LG LYHPNLV L+GYCLE
Sbjct: 74  GWIDEHSLTAAKPGTGIVIAVKRLSQESFQ-GHQEWLAEINYLGQLYHPNLVKLIGYCLE 132

Query: 58  DGNSVLVYEFVPRGSLDNH 2
           D + +LVYEF+P+GSL+NH
Sbjct: 133 DDHRLLVYEFMPKGSLENH 151


Top