BLASTX nr result

ID: Coptis25_contig00009201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009201
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN35027.1| unknown [Zea mays]                                     120   2e-25
ref|NP_001147109.1| LOC100280717 [Zea mays] gi|195607294|gb|ACG2...   120   2e-25
ref|NP_001130723.1| uncharacterized protein LOC100191827 [Zea ma...   120   2e-25
ref|XP_002453144.1| hypothetical protein SORBIDRAFT_04g000780 [S...   116   3e-24
ref|XP_003571751.1| PREDICTED: nephrocystin-3-like [Brachypodium...   115   4e-24

>gb|ACN35027.1| unknown [Zea mays]
          Length = 546

 Score =  120 bits (300), Expect = 2e-25
 Identities = 64/111 (57%), Positives = 76/111 (68%)
 Frame = -2

Query: 592 YDAMGRVEDAIEILEYILKVREEKLGTANPDVEDERKRLAELLKEXXXXXXXXXXXXXXX 413
           YDAMGRVEDAIEILE++LKVREEKLGTANPDV+DE+KRLAELLKE               
Sbjct: 464 YDAMGRVEDAIEILEHVLKVREEKLGTANPDVDDEKKRLAELLKE--------------- 508

Query: 412 XXXXXXXXXXXXXXGKSRNKKTKSLQNLLGSKSQRGKKEAKKKWTSLGFKS 260
                         G+SRN+K KSLQNL G+ SQR KKEA ++W++ GF+S
Sbjct: 509 -------------AGRSRNRKQKSLQNLFGTNSQRAKKEAGRRWSNFGFRS 546


>ref|NP_001147109.1| LOC100280717 [Zea mays] gi|195607294|gb|ACG25477.1| kinesin light
           chain [Zea mays]
          Length = 587

 Score =  120 bits (300), Expect = 2e-25
 Identities = 64/111 (57%), Positives = 76/111 (68%)
 Frame = -2

Query: 592 YDAMGRVEDAIEILEYILKVREEKLGTANPDVEDERKRLAELLKEXXXXXXXXXXXXXXX 413
           YDAMGRVEDAIEILE++LKVREEKLGTANPDVEDE+KRLAELLKE               
Sbjct: 505 YDAMGRVEDAIEILEHVLKVREEKLGTANPDVEDEKKRLAELLKE--------------- 549

Query: 412 XXXXXXXXXXXXXXGKSRNKKTKSLQNLLGSKSQRGKKEAKKKWTSLGFKS 260
                         G+SRN+K KSL+NL G+ SQR KKEA ++W++ GF+S
Sbjct: 550 -------------AGRSRNRKQKSLENLFGTNSQRAKKEAGRRWSNFGFRS 587


>ref|NP_001130723.1| uncharacterized protein LOC100191827 [Zea mays]
           gi|194689950|gb|ACF79059.1| unknown [Zea mays]
           gi|223949777|gb|ACN28972.1| unknown [Zea mays]
           gi|413935201|gb|AFW69752.1| hypothetical protein
           ZEAMMB73_983154 [Zea mays]
          Length = 612

 Score =  120 bits (300), Expect = 2e-25
 Identities = 64/111 (57%), Positives = 76/111 (68%)
 Frame = -2

Query: 592 YDAMGRVEDAIEILEYILKVREEKLGTANPDVEDERKRLAELLKEXXXXXXXXXXXXXXX 413
           YDAMGRVEDAIEILE++LKVREEKLGTANPDV+DE+KRLAELLKE               
Sbjct: 530 YDAMGRVEDAIEILEHVLKVREEKLGTANPDVDDEKKRLAELLKE--------------- 574

Query: 412 XXXXXXXXXXXXXXGKSRNKKTKSLQNLLGSKSQRGKKEAKKKWTSLGFKS 260
                         G+SRN+K KSLQNL G+ SQR KKEA ++W++ GF+S
Sbjct: 575 -------------AGRSRNRKQKSLQNLFGTNSQRAKKEAGRRWSNFGFRS 612


>ref|XP_002453144.1| hypothetical protein SORBIDRAFT_04g000780 [Sorghum bicolor]
           gi|241932975|gb|EES06120.1| hypothetical protein
           SORBIDRAFT_04g000780 [Sorghum bicolor]
          Length = 612

 Score =  116 bits (291), Expect = 3e-24
 Identities = 63/111 (56%), Positives = 75/111 (67%)
 Frame = -2

Query: 592 YDAMGRVEDAIEILEYILKVREEKLGTANPDVEDERKRLAELLKEXXXXXXXXXXXXXXX 413
           YDAMGRVEDAIEILE++LKVREEKLGTANPDVEDE+KRLAELLKE               
Sbjct: 530 YDAMGRVEDAIEILEHVLKVREEKLGTANPDVEDEKKRLAELLKE--------------- 574

Query: 412 XXXXXXXXXXXXXXGKSRNKKTKSLQNLLGSKSQRGKKEAKKKWTSLGFKS 260
                         G+SRN+K KSL+NL  + SQR KKEA ++W++ GF+S
Sbjct: 575 -------------AGRSRNRKQKSLENLFVTNSQRAKKEAGRRWSNFGFRS 612


>ref|XP_003571751.1| PREDICTED: nephrocystin-3-like [Brachypodium distachyon]
          Length = 618

 Score =  115 bits (289), Expect = 4e-24
 Identities = 64/112 (57%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
 Frame = -2

Query: 592 YDAMGRVEDAIEILEYILKVREEKLGTANPDVEDERKRLAELLKEXXXXXXXXXXXXXXX 413
           YDAMGRVEDAIEILE++LKVREEKLGTANPDVEDE+KRLAELLKE               
Sbjct: 535 YDAMGRVEDAIEILEHVLKVREEKLGTANPDVEDEKKRLAELLKE--------------- 579

Query: 412 XXXXXXXXXXXXXXGKSRNKKTKSLQNLLGSKSQRGKKEA-KKKWTSLGFKS 260
                         G+SRN+K KSL+NL GS +QR KK+A  ++WT+ GF+S
Sbjct: 580 -------------AGRSRNRKQKSLENLFGSNAQRAKKDAGGRRWTNFGFRS 618


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