BLASTX nr result

ID: Coptis25_contig00009177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009177
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277384.2| PREDICTED: uncharacterized protein LOC100262...    89   4e-16
emb|CAN83741.1| hypothetical protein VITISV_031206 [Vitis vinifera]    89   4e-16
ref|XP_003616693.1| CCP [Medicago truncatula] gi|355518028|gb|AE...    88   8e-16
gb|AAO42282.1| unknown protein [Arabidopsis thaliana]                  87   1e-15
ref|NP_181563.2| protein trichome birefringence-like 33 [Arabido...    87   1e-15

>ref|XP_002277384.2| PREDICTED: uncharacterized protein LOC100262072 [Vitis vinifera]
           gi|297736550|emb|CBI25421.3| unnamed protein product
           [Vitis vinifera]
          Length = 419

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 50/97 (51%), Positives = 57/97 (58%)
 Frame = -3

Query: 293 VRKTPFSPVXXXXXXXXXXXXXLYSNDLNCFLGQPFQYFKAYQPISTPEKDIHKVPFAIG 114
           +RK  FSP              LY  D +C +    +     +PI   EK   K+PFAIG
Sbjct: 14  LRKARFSPYLFTLLAFIVFVAVLYGEDFSCIVELGSE--SDGRPI---EKRREKLPFAIG 68

Query: 113 KIEGEECDVFSGKWVRDASTRPLYEESECPYIQPQLT 3
           +IEG  CDVFSG WVRD S RPLYEESECPYIQPQLT
Sbjct: 69  EIEGGRCDVFSGMWVRDESNRPLYEESECPYIQPQLT 105


>emb|CAN83741.1| hypothetical protein VITISV_031206 [Vitis vinifera]
          Length = 409

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 50/97 (51%), Positives = 57/97 (58%)
 Frame = -3

Query: 293 VRKTPFSPVXXXXXXXXXXXXXLYSNDLNCFLGQPFQYFKAYQPISTPEKDIHKVPFAIG 114
           +RK  FSP              LY  D +C +    +     +PI   EK   K+PFAIG
Sbjct: 14  LRKARFSPYLFTLLAFIVFVAVLYGEDFSCIVELGSE--SDGRPI---EKRREKLPFAIG 68

Query: 113 KIEGEECDVFSGKWVRDASTRPLYEESECPYIQPQLT 3
           +IEG  CDVFSG WVRD S RPLYEESECPYIQPQLT
Sbjct: 69  EIEGGRCDVFSGMWVRDESNRPLYEESECPYIQPQLT 105


>ref|XP_003616693.1| CCP [Medicago truncatula] gi|355518028|gb|AES99651.1| CCP [Medicago
           truncatula]
          Length = 488

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 53/103 (51%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
 Frame = -3

Query: 302 SISVRKTPFSPVXXXXXXXXXXXXXLYSNDLNCFLG-QPFQYFKAYQPISTPE--KDIHK 132
           SI   K  FSP              LY  D  C  G Q + Y    +  STPE  K   K
Sbjct: 73  SILRSKGRFSPYLFTLLAFILFVTILYGEDFMCIFGEQLYNYSNQDKFFSTPERVKKQIK 132

Query: 131 VPFAIGKIEGEECDVFSGKWVRDASTRPLYEESECPYIQPQLT 3
           VPFA+GK E E CD+FSG+WV D  TRPLYEESECPYIQPQLT
Sbjct: 133 VPFAVGKTE-EGCDIFSGRWVWDEDTRPLYEESECPYIQPQLT 174


>gb|AAO42282.1| unknown protein [Arabidopsis thaliana]
          Length = 425

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 52/98 (53%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
 Frame = -3

Query: 290 RKTPFSPVXXXXXXXXXXXXXLYSNDLNCFLGQPFQYFKAYQPISTPEKD--IHKVPFAI 117
           RK  FSP              LY  D  C  GQ    F    P  TPEK+    K+ FAI
Sbjct: 16  RKARFSPYLFTLLAFILFVSVLYGEDFMCIFGQLEPNF-VLPPSRTPEKNKKSEKLAFAI 74

Query: 116 GKIEGEECDVFSGKWVRDASTRPLYEESECPYIQPQLT 3
           GK E E CDVFSGKWVRD  +RPLYEE ECPYIQPQLT
Sbjct: 75  GKTE-ESCDVFSGKWVRDEVSRPLYEEWECPYIQPQLT 111


>ref|NP_181563.2| protein trichome birefringence-like 33 [Arabidopsis thaliana]
           gi|330254720|gb|AEC09814.1| protein trichome
           birefringence-like 33 [Arabidopsis thaliana]
          Length = 425

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 52/98 (53%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
 Frame = -3

Query: 290 RKTPFSPVXXXXXXXXXXXXXLYSNDLNCFLGQPFQYFKAYQPISTPEKD--IHKVPFAI 117
           RK  FSP              LY  D  C  GQ    F    P  TPEK+    K+ FAI
Sbjct: 16  RKARFSPYLFTLLAFILFVSVLYGEDFMCIFGQLEPNF-VLPPSRTPEKNKKSEKLAFAI 74

Query: 116 GKIEGEECDVFSGKWVRDASTRPLYEESECPYIQPQLT 3
           GK E E CDVFSGKWVRD  +RPLYEE ECPYIQPQLT
Sbjct: 75  GKTE-ESCDVFSGKWVRDEVSRPLYEEWECPYIQPQLT 111


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