BLASTX nr result

ID: Coptis25_contig00009173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009173
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600869.1| hypothetical protein MTR_3g070270 [Medicago ...    86   1e-14
ref|XP_002315164.1| predicted protein [Populus trichocarpa] gi|2...    64   4e-08

>ref|XP_003600869.1| hypothetical protein MTR_3g070270 [Medicago truncatula]
           gi|355489917|gb|AES71120.1| hypothetical protein
           MTR_3g070270 [Medicago truncatula]
          Length = 271

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 48/151 (31%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
 Frame = -3

Query: 537 KGITHNPHFTPLQSYSKRAREKLIVGWDEIFEETVDHIQSLTAETFSRHVNELWKT-SGV 361
           KGI  +PH+  L++YS+ AREKLI  WD+ FE+T + +  L A+ F  +  +LWKT   +
Sbjct: 115 KGIPQSPHYFQLRNYSELAREKLIAAWDQAFEDTAEKVHDLMAKDFWINARKLWKTMEDL 174

Query: 360 REPGVQCCSVEEAT*RTHRCYEQAQASQVEISELKVEAEDYRKARMKIEEEMADLQAQVK 181
           +  G     +              + S++EI ELK +AE++R  R ++E  +   Q + +
Sbjct: 175 QGMGYNVIPIRRRLVEKTEVMILFKNSKLEILELKNKAENHRLERSRLESIVMSFQMRAE 234

Query: 180 TAQVMVDELMDQVDKMDENLPILDALFENSA 88
              + +  L+ +VD+ ++ LP  D L E+ A
Sbjct: 235 REGMNMVRLLGEVDQKEKTLPNYDILMESLA 265


>ref|XP_002315164.1| predicted protein [Populus trichocarpa] gi|222864204|gb|EEF01335.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 1/153 (0%)
 Frame = -3

Query: 537 KGITHNPHFTPLQSYSKRAREKLIVGWDEIFEETVDHIQSLTAETFSRHVNELWKTSG-V 361
           KGI  +PHF  L + S   R+ LI  WD IFEETV+ + SL    F     ELWKT G +
Sbjct: 166 KGIPQSPHFYQLINLSGHTRKVLISSWDRIFEETVEQMHSLQVNDFWVRARELWKTMGEL 225

Query: 360 REPGVQCCSVEEAT*RTHRCYEQAQASQVEISELKVEAEDYRKARMKIEEEMADLQAQVK 181
           +  G     +            + + ++V +  L ++AE++R  + ++E  +  LQ  + 
Sbjct: 226 QSMGYNVIPLRRRLVELTDVMIELKLTKVGMKGLMIKAENHRMEKSRLEFVILRLQEMIM 285

Query: 180 TAQVMVDELMDQVDKMDENLPILDALFENSAKN 82
                +   + Q+ +M++   I      NS  N
Sbjct: 286 QEHYGMLGALAQMVEMEKEHGIQHIPSPNSLMN 318


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