BLASTX nr result

ID: Coptis25_contig00009166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009166
         (929 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516003.1| Auxin-responsive protein IAA27, putative [Ri...   260   3e-67
ref|XP_002303297.1| predicted protein [Populus trichocarpa] gi|2...   258   2e-66
emb|CBI36106.3| unnamed protein product [Vitis vinifera]              253   3e-65
ref|XP_002284282.1| PREDICTED: auxin-responsive protein IAA27-li...   253   3e-65
ref|XP_002331172.1| predicted protein [Populus trichocarpa] gi|2...   251   1e-64

>ref|XP_002516003.1| Auxin-responsive protein IAA27, putative [Ricinus communis]
           gi|223544908|gb|EEF46423.1| Auxin-responsive protein
           IAA27, putative [Ricinus communis]
          Length = 373

 Score =  260 bits (665), Expect = 3e-67
 Identities = 132/177 (74%), Positives = 142/177 (80%)
 Frame = +3

Query: 6   SKAQVVGWPPIRSFRKNTMAANPAKNSGDAEGKSGSGCLYVKVSMDGAPYLRKVDLKTYS 185
           +KAQVVGWPPIRSFRKNTMA+N AKN+ DAEGKSGSGCLYVKVSMDGAPYLRKVDLKTYS
Sbjct: 216 AKAQVVGWPPIRSFRKNTMASNVAKNNEDAEGKSGSGCLYVKVSMDGAPYLRKVDLKTYS 275

Query: 186 NYVELSAALEKMFSCFTIGQCGSHGVTGRDGLTESRLMDLLHGSECVLTYEDKXXXXXXX 365
           NYVELS+ LEKMFSCFTIGQCGSHG+ GRDGL+E+ L DLLHGSE VLTYEDK       
Sbjct: 276 NYVELSSGLEKMFSCFTIGQCGSHGLPGRDGLSETCLKDLLHGSEYVLTYEDK------- 328

Query: 366 XXXXXXXXXXXXXXXXXXXXXVPWDMFTDSCRRLRIMKGSEAIGLAPRAMEKCKSRN 536
                                VPW+MFT++CRRLRIMKGSEAIGLAPRAMEKCKSRN
Sbjct: 329 ------------DSDWMLVGDVPWEMFTETCRRLRIMKGSEAIGLAPRAMEKCKSRN 373


>ref|XP_002303297.1| predicted protein [Populus trichocarpa] gi|222840729|gb|EEE78276.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  258 bits (658), Expect = 2e-66
 Identities = 130/177 (73%), Positives = 141/177 (79%)
 Frame = +3

Query: 6   SKAQVVGWPPIRSFRKNTMAANPAKNSGDAEGKSGSGCLYVKVSMDGAPYLRKVDLKTYS 185
           +KAQVVGWPPIRSFRKNTMA++  KN+ D EGKSG GCLYVKVSMDGAPYLRKVDLKTYS
Sbjct: 192 AKAQVVGWPPIRSFRKNTMASSLVKNNEDVEGKSGYGCLYVKVSMDGAPYLRKVDLKTYS 251

Query: 186 NYVELSAALEKMFSCFTIGQCGSHGVTGRDGLTESRLMDLLHGSECVLTYEDKXXXXXXX 365
           NY+ELS+ALEKMFSCFTIGQCGSHG+ G+DGLTESRL D+LHGSE VLTYEDK       
Sbjct: 252 NYLELSSALEKMFSCFTIGQCGSHGLRGQDGLTESRLKDILHGSEYVLTYEDK------- 304

Query: 366 XXXXXXXXXXXXXXXXXXXXXVPWDMFTDSCRRLRIMKGSEAIGLAPRAMEKCKSRN 536
                                VPWDMFT+SCRRLRIMKGSEAIGLAPRAMEKCK+RN
Sbjct: 305 ------------DGDWMLVGDVPWDMFTNSCRRLRIMKGSEAIGLAPRAMEKCKNRN 349


>emb|CBI36106.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score =  253 bits (647), Expect = 3e-65
 Identities = 130/177 (73%), Positives = 141/177 (79%)
 Frame = +3

Query: 6   SKAQVVGWPPIRSFRKNTMAANPAKNSGDAEGKSGSGCLYVKVSMDGAPYLRKVDLKTYS 185
           +KAQVVGWPPIRSFRKNTMA++ AKN+ DAEGKSG GCLYVKVSMDGAPYLRKVDLK Y 
Sbjct: 136 AKAQVVGWPPIRSFRKNTMASS-AKNNEDAEGKSGLGCLYVKVSMDGAPYLRKVDLKIYC 194

Query: 186 NYVELSAALEKMFSCFTIGQCGSHGVTGRDGLTESRLMDLLHGSECVLTYEDKXXXXXXX 365
           NY+ELS+ALEKMFSCFTIGQCGSHG+ GRDGLTES LMDLLHGSE VLTYEDK       
Sbjct: 195 NYMELSSALEKMFSCFTIGQCGSHGLPGRDGLTESHLMDLLHGSEYVLTYEDK------- 247

Query: 366 XXXXXXXXXXXXXXXXXXXXXVPWDMFTDSCRRLRIMKGSEAIGLAPRAMEKCKSRN 536
                                VPW+MFT+SC+RLRIMKGSEAIGLAPRAMEKCK+RN
Sbjct: 248 ------------DGDWMLVGDVPWEMFTESCKRLRIMKGSEAIGLAPRAMEKCKNRN 292


>ref|XP_002284282.1| PREDICTED: auxin-responsive protein IAA27-like isoform 1 [Vitis
           vinifera]
          Length = 343

 Score =  253 bits (647), Expect = 3e-65
 Identities = 130/177 (73%), Positives = 141/177 (79%)
 Frame = +3

Query: 6   SKAQVVGWPPIRSFRKNTMAANPAKNSGDAEGKSGSGCLYVKVSMDGAPYLRKVDLKTYS 185
           +KAQVVGWPPIRSFRKNTMA++ AKN+ DAEGKSG GCLYVKVSMDGAPYLRKVDLK Y 
Sbjct: 187 AKAQVVGWPPIRSFRKNTMASS-AKNNEDAEGKSGLGCLYVKVSMDGAPYLRKVDLKIYC 245

Query: 186 NYVELSAALEKMFSCFTIGQCGSHGVTGRDGLTESRLMDLLHGSECVLTYEDKXXXXXXX 365
           NY+ELS+ALEKMFSCFTIGQCGSHG+ GRDGLTES LMDLLHGSE VLTYEDK       
Sbjct: 246 NYMELSSALEKMFSCFTIGQCGSHGLPGRDGLTESHLMDLLHGSEYVLTYEDK------- 298

Query: 366 XXXXXXXXXXXXXXXXXXXXXVPWDMFTDSCRRLRIMKGSEAIGLAPRAMEKCKSRN 536
                                VPW+MFT+SC+RLRIMKGSEAIGLAPRAMEKCK+RN
Sbjct: 299 ------------DGDWMLVGDVPWEMFTESCKRLRIMKGSEAIGLAPRAMEKCKNRN 343


>ref|XP_002331172.1| predicted protein [Populus trichocarpa] gi|222873255|gb|EEF10386.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  251 bits (642), Expect = 1e-64
 Identities = 130/177 (73%), Positives = 139/177 (78%)
 Frame = +3

Query: 6   SKAQVVGWPPIRSFRKNTMAANPAKNSGDAEGKSGSGCLYVKVSMDGAPYLRKVDLKTYS 185
           SKAQVVGWPPIRSFRKNTMA++ +KN   AE KSGSGCLYVKVSMDGAPYLRKVDLKT+ 
Sbjct: 150 SKAQVVGWPPIRSFRKNTMASHLSKNDDGAEVKSGSGCLYVKVSMDGAPYLRKVDLKTFG 209

Query: 186 NYVELSAALEKMFSCFTIGQCGSHGVTGRDGLTESRLMDLLHGSECVLTYEDKXXXXXXX 365
           +Y+ELS+ALEKMFSCFTIGQCGSH V G+DGL+ESRLMDLLHGSE VLTYEDK       
Sbjct: 210 SYMELSSALEKMFSCFTIGQCGSHVVPGQDGLSESRLMDLLHGSEYVLTYEDK------- 262

Query: 366 XXXXXXXXXXXXXXXXXXXXXVPWDMFTDSCRRLRIMKGSEAIGLAPRAMEKCKSRN 536
                                VPW MFTDSCRRLRIMKGSEAIGLAPRAMEKCKSRN
Sbjct: 263 ------------DNDWMLVGDVPWKMFTDSCRRLRIMKGSEAIGLAPRAMEKCKSRN 307


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