BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009139
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81324.1| hypothetical protein VITISV_041843 [Vitis vinifera]   107   2e-46
ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containi...   105   4e-46
emb|CBI20759.3| unnamed protein product [Vitis vinifera]              105   4e-46
dbj|BAD33810.1| pentatricopeptide (PPR) repeat-containing protei...    91   2e-37
gb|EEC84620.1| hypothetical protein OsI_31472 [Oryza sativa Indi...    91   2e-37

>emb|CAN81324.1| hypothetical protein VITISV_041843 [Vitis vinifera]
          Length = 1120

 Score =  107 bits (266), Expect(2) = 2e-46
 Identities = 54/76 (71%), Positives = 60/76 (78%)
 Frame = -3

Query: 230 KIEAQKVTFHYLLPDAVTYTTLLKGFSDANDFISVQKLVIEMKSSENLIIDRIAYTAIVD 51
           K  AQK     L PDA+TYTTLLKGF  A D +SVQK+V+EMKSS NL +DR AYTAIVD
Sbjct: 262 KENAQKTIDVDLFPDAITYTTLLKGFGHAKDLLSVQKIVMEMKSSNNLFVDRTAYTAIVD 321

Query: 50  ALLICGSTKGALCIFG 3
           ALL CGS+KGALCIFG
Sbjct: 322 ALLNCGSSKGALCIFG 337



 Score =  104 bits (259), Expect(2) = 2e-46
 Identities = 51/71 (71%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
 Frame = -1

Query: 457 LHEDG-PSILMYNLLIKGYIKDGSPQDAFAVRDEILRQGLKPDRLTYNTLVFACVKSRQM 281
           LHEDG PSILMYNLL+KGYI  G P  A +V DEIL+QGLKPDRLTYNTL+FACVK+ ++
Sbjct: 192 LHEDGSPSILMYNLLMKGYITAGFPMAALSVHDEILQQGLKPDRLTYNTLIFACVKTEKL 251

Query: 280 DAAMQLFAEMK 248
           D AM+ F EMK
Sbjct: 252 DTAMRYFEEMK 262


>ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g10690-like [Vitis vinifera]
          Length = 609

 Score =  105 bits (263), Expect(2) = 4e-46
 Identities = 53/76 (69%), Positives = 60/76 (78%)
 Frame = -3

Query: 230 KIEAQKVTFHYLLPDAVTYTTLLKGFSDANDFISVQKLVIEMKSSENLIIDRIAYTAIVD 51
           K  AQK     L PDA+TYTTLLKGF  A D +SVQK+V+EMKSS NL +DR AYTAIVD
Sbjct: 262 KENAQKTIDVDLFPDAITYTTLLKGFGHAKDLLSVQKIVMEMKSSNNLFVDRTAYTAIVD 321

Query: 50  ALLICGSTKGALCIFG 3
           ALL CGS+KGALC+FG
Sbjct: 322 ALLNCGSSKGALCMFG 337



 Score =  104 bits (259), Expect(2) = 4e-46
 Identities = 51/71 (71%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
 Frame = -1

Query: 457 LHEDG-PSILMYNLLIKGYIKDGSPQDAFAVRDEILRQGLKPDRLTYNTLVFACVKSRQM 281
           LHEDG PSILMYNLL+KGYI  G P  A +V DEIL+QGLKPDRLTYNTL+FACVK+ ++
Sbjct: 192 LHEDGSPSILMYNLLMKGYITAGFPMAALSVHDEILQQGLKPDRLTYNTLIFACVKTEKL 251

Query: 280 DAAMQLFAEMK 248
           D AM+ F EMK
Sbjct: 252 DTAMRYFEEMK 262


>emb|CBI20759.3| unnamed protein product [Vitis vinifera]
          Length = 570

 Score =  105 bits (263), Expect(2) = 4e-46
 Identities = 53/76 (69%), Positives = 60/76 (78%)
 Frame = -3

Query: 230 KIEAQKVTFHYLLPDAVTYTTLLKGFSDANDFISVQKLVIEMKSSENLIIDRIAYTAIVD 51
           K  AQK     L PDA+TYTTLLKGF  A D +SVQK+V+EMKSS NL +DR AYTAIVD
Sbjct: 279 KENAQKTIDVDLFPDAITYTTLLKGFGHAKDLLSVQKIVMEMKSSNNLFVDRTAYTAIVD 338

Query: 50  ALLICGSTKGALCIFG 3
           ALL CGS+KGALC+FG
Sbjct: 339 ALLNCGSSKGALCMFG 354



 Score =  104 bits (259), Expect(2) = 4e-46
 Identities = 51/71 (71%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
 Frame = -1

Query: 457 LHEDG-PSILMYNLLIKGYIKDGSPQDAFAVRDEILRQGLKPDRLTYNTLVFACVKSRQM 281
           LHEDG PSILMYNLL+KGYI  G P  A +V DEIL+QGLKPDRLTYNTL+FACVK+ ++
Sbjct: 209 LHEDGSPSILMYNLLMKGYITAGFPMAALSVHDEILQQGLKPDRLTYNTLIFACVKTEKL 268

Query: 280 DAAMQLFAEMK 248
           D AM+ F EMK
Sbjct: 269 DTAMRYFEEMK 279


>dbj|BAD33810.1| pentatricopeptide (PPR) repeat-containing protein / CBS
           domain-containing protein-like [Oryza sativa Japonica
           Group] gi|50726328|dbj|BAD33918.1| pentatricopeptide
           (PPR) repeat-containing protein / CBS domain-containing
           protein-like [Oryza sativa Japonica Group]
          Length = 564

 Score = 91.3 bits (225), Expect(2) = 2e-37
 Identities = 42/73 (57%), Positives = 55/73 (75%)
 Frame = -1

Query: 448 DGPSILMYNLLIKGYIKDGSPQDAFAVRDEILRQGLKPDRLTYNTLVFACVKSRQMDAAM 269
           +G S+L+YNLL+KGYIK   P  A  V+DEILRQGLKPDRLTYNT++ ACVKS ++D A+
Sbjct: 208 EGHSVLLYNLLMKGYIKSNFPLGALTVKDEILRQGLKPDRLTYNTIISACVKSAEIDMAI 267

Query: 268 QLFAEMKVSRKSE 230
           +   +MK   K +
Sbjct: 268 RFLEDMKEEAKRD 280



 Score = 89.7 bits (221), Expect(2) = 2e-37
 Identities = 48/76 (63%), Positives = 57/76 (75%)
 Frame = -3

Query: 230 KIEAQKVTFHYLLPDAVTYTTLLKGFSDANDFISVQKLVIEMKSSENLIIDRIAYTAIVD 51
           K EA++     LLPDAVTYTTLLKG  ++ D  SV K+V+EMKS+  + IDR AYTA+VD
Sbjct: 274 KEEAKRDNNPELLPDAVTYTTLLKGLGNSQDLYSVLKIVVEMKSAP-ISIDRTAYTAMVD 332

Query: 50  ALLICGSTKGALCIFG 3
           ALL CGS  GALCIFG
Sbjct: 333 ALLACGSINGALCIFG 348


>gb|EEC84620.1| hypothetical protein OsI_31472 [Oryza sativa Indica Group]
          Length = 544

 Score = 91.3 bits (225), Expect(2) = 2e-37
 Identities = 42/73 (57%), Positives = 55/73 (75%)
 Frame = -1

Query: 448 DGPSILMYNLLIKGYIKDGSPQDAFAVRDEILRQGLKPDRLTYNTLVFACVKSRQMDAAM 269
           +G S+L+YNLL+KGYIK   P  A  V+DEILRQGLKPDRLTYNT++ ACVKS ++D A+
Sbjct: 131 EGHSVLLYNLLMKGYIKSNFPLGALTVKDEILRQGLKPDRLTYNTIISACVKSAEIDMAI 190

Query: 268 QLFAEMKVSRKSE 230
           +   +MK   K +
Sbjct: 191 RFLEDMKEEAKRD 203



 Score = 89.7 bits (221), Expect(2) = 2e-37
 Identities = 48/76 (63%), Positives = 57/76 (75%)
 Frame = -3

Query: 230 KIEAQKVTFHYLLPDAVTYTTLLKGFSDANDFISVQKLVIEMKSSENLIIDRIAYTAIVD 51
           K EA++     LLPDAVTYTTLLKG  ++ D  SV K+V+EMKS+  + IDR AYTA+VD
Sbjct: 197 KEEAKRDNNPELLPDAVTYTTLLKGLGNSQDLYSVLKIVVEMKSAP-ISIDRTAYTAMVD 255

Query: 50  ALLICGSTKGALCIFG 3
           ALL CGS  GALCIFG
Sbjct: 256 ALLACGSINGALCIFG 271