BLASTX nr result

ID: Coptis25_contig00009136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009136
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633080.1| PREDICTED: topless-related protein 4-like [V...   103   3e-20
ref|XP_003633079.1| PREDICTED: topless-related protein 4-like [V...   103   3e-20
ref|XP_002285341.2| PREDICTED: topless-related protein 4-like is...   103   3e-20
ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|2...   101   1e-19
ref|XP_002308068.1| predicted protein [Populus trichocarpa] gi|2...   101   2e-19

>ref|XP_003633080.1| PREDICTED: topless-related protein 4-like [Vitis vinifera]
          Length = 1123

 Score =  103 bits (258), Expect = 3e-20
 Identities = 53/82 (64%), Positives = 59/82 (71%)
 Frame = -3

Query: 744  CRIHPTAYIPSNISSNNSRVYPLVIAAHPTEPNQFALGLTDGAVHVLEPLESEGKWGSLP 565
            CRI+PTAY+P N S    RVYPLV+AAHP+EPNQFALGLTDG V VLEPLESEGKWG+ P
Sbjct: 1045 CRINPTAYLPPNPSL---RVYPLVVAAHPSEPNQFALGLTDGGVCVLEPLESEGKWGTSP 1101

Query: 564  PSDNXXXXXXXXXXXXSDQPTR 499
            P +N            SDQP R
Sbjct: 1102 PLENGAGPSSTSGAAGSDQPQR 1123


>ref|XP_003633079.1| PREDICTED: topless-related protein 4-like [Vitis vinifera]
          Length = 1123

 Score =  103 bits (258), Expect = 3e-20
 Identities = 53/82 (64%), Positives = 59/82 (71%)
 Frame = -3

Query: 744  CRIHPTAYIPSNISSNNSRVYPLVIAAHPTEPNQFALGLTDGAVHVLEPLESEGKWGSLP 565
            CRI+PTAY+P N S    RVYPLV+AAHP+EPNQFALGLTDG V VLEPLESEGKWG+ P
Sbjct: 1045 CRINPTAYLPPNPSL---RVYPLVVAAHPSEPNQFALGLTDGGVCVLEPLESEGKWGTSP 1101

Query: 564  PSDNXXXXXXXXXXXXSDQPTR 499
            P +N            SDQP R
Sbjct: 1102 PLENGAGPSSTSGAAGSDQPQR 1123


>ref|XP_002285341.2| PREDICTED: topless-related protein 4-like isoform 1 [Vitis vinifera]
            gi|297738983|emb|CBI28228.3| unnamed protein product
            [Vitis vinifera]
          Length = 1133

 Score =  103 bits (258), Expect = 3e-20
 Identities = 53/82 (64%), Positives = 59/82 (71%)
 Frame = -3

Query: 744  CRIHPTAYIPSNISSNNSRVYPLVIAAHPTEPNQFALGLTDGAVHVLEPLESEGKWGSLP 565
            CRI+PTAY+P N S    RVYPLV+AAHP+EPNQFALGLTDG V VLEPLESEGKWG+ P
Sbjct: 1055 CRINPTAYLPPNPSL---RVYPLVVAAHPSEPNQFALGLTDGGVCVLEPLESEGKWGTSP 1111

Query: 564  PSDNXXXXXXXXXXXXSDQPTR 499
            P +N            SDQP R
Sbjct: 1112 PLENGAGPSSTSGAAGSDQPQR 1133


>ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|222866075|gb|EEF03206.1|
            predicted protein [Populus trichocarpa]
          Length = 1126

 Score =  101 bits (252), Expect = 1e-19
 Identities = 48/64 (75%), Positives = 55/64 (85%)
 Frame = -3

Query: 744  CRIHPTAYIPSNISSNNSRVYPLVIAAHPTEPNQFALGLTDGAVHVLEPLESEGKWGSLP 565
            CRI+ TAY+P N SS   RVYPLVIAAHP+EP+QFALGLTDG +HVLEPLESEGKWG+ P
Sbjct: 1047 CRINSTAYLPPNPSS--LRVYPLVIAAHPSEPDQFALGLTDGGIHVLEPLESEGKWGTSP 1104

Query: 564  PSDN 553
            P +N
Sbjct: 1105 PVEN 1108


>ref|XP_002308068.1| predicted protein [Populus trichocarpa] gi|222854044|gb|EEE91591.1|
            predicted protein [Populus trichocarpa]
          Length = 1132

 Score =  101 bits (251), Expect = 2e-19
 Identities = 49/64 (76%), Positives = 54/64 (84%)
 Frame = -3

Query: 744  CRIHPTAYIPSNISSNNSRVYPLVIAAHPTEPNQFALGLTDGAVHVLEPLESEGKWGSLP 565
            CRI  TAY+P N SS   RVYPLVIAAHP+EP+QFALGLTDG VHVLEPLESEGKWG+ P
Sbjct: 1053 CRISSTAYLPPNPSS--LRVYPLVIAAHPSEPDQFALGLTDGGVHVLEPLESEGKWGTSP 1110

Query: 564  PSDN 553
            P +N
Sbjct: 1111 PVEN 1114


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