BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00009129
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520744.1| NAD dependent epimerase/dehydratase, putativ...    66   2e-16
ref|XP_002306773.1| predicted protein [Populus trichocarpa] gi|2...    65   2e-16
ref|NP_001234656.1| mRNA binding protein precursor [Solanum lyco...    63   4e-16
ref|XP_002302114.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-16
gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotian...    64   5e-16

>ref|XP_002520744.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
           gi|223540129|gb|EEF41706.1| NAD dependent
           epimerase/dehydratase, putative [Ricinus communis]
          Length = 398

 Score = 66.2 bits (160), Expect(3) = 2e-16
 Identities = 31/49 (63%), Positives = 35/49 (71%)
 Frame = -2

Query: 670 VDKYIADVFSRWAEFLP*HIIGSGNIKDCEEWFFHRIVHD*PVEFRDQG 524
           V+KYIA+VFS WA F P ++IGSGN KDCEEWFF RIV   PV     G
Sbjct: 217 VEKYIAEVFSSWAVFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG 265



 Score = 44.3 bits (103), Expect(3) = 2e-16
 Identities = 21/30 (70%), Positives = 24/30 (80%)
 Frame = -3

Query: 513 NISHVRDLSSMLTSAVEDPIVSSGKIFNYV 424
           NISHVRDLSSMLT +VE+P  + G IFN V
Sbjct: 270 NISHVRDLSSMLTKSVENPEAAGGNIFNCV 299



 Score = 20.4 bits (41), Expect(3) = 2e-16
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -1

Query: 539 IPGSGMQL 516
           IPGSGMQL
Sbjct: 261 IPGSGMQL 268


>ref|XP_002306773.1| predicted protein [Populus trichocarpa] gi|222856222|gb|EEE93769.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score = 65.5 bits (158), Expect(3) = 2e-16
 Identities = 30/49 (61%), Positives = 35/49 (71%)
 Frame = -2

Query: 670 VDKYIADVFSRWAEFLP*HIIGSGNIKDCEEWFFHRIVHD*PVEFRDQG 524
           V+KYIA++FS WA F P ++IGSGN KDCEEWFF RIV   PV     G
Sbjct: 190 VEKYIAEIFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG 238



 Score = 45.1 bits (105), Expect(3) = 2e-16
 Identities = 22/30 (73%), Positives = 25/30 (83%)
 Frame = -3

Query: 513 NISHVRDLSSMLTSAVEDPIVSSGKIFNYV 424
           NI+HVRDLSSMLT AVE+P  +SG IFN V
Sbjct: 243 NIAHVRDLSSMLTLAVENPEAASGNIFNCV 272



 Score = 20.4 bits (41), Expect(3) = 2e-16
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -1

Query: 539 IPGSGMQL 516
           IPGSGMQL
Sbjct: 234 IPGSGMQL 241


>ref|NP_001234656.1| mRNA binding protein precursor [Solanum lycopersicum]
           gi|26453355|gb|AAD21574.3| mRNA binding protein
           precursor [Solanum lycopersicum]
          Length = 407

 Score = 63.2 bits (152), Expect(3) = 4e-16
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = -2

Query: 670 VDKYIADVFSRWAEFLP*HIIGSGNIKDCEEWFFHRIVHD*PV 542
           V+KYI+++F  WA F P ++IGSGN KDCEEWFF RIV   PV
Sbjct: 220 VEKYISEIFGSWASFRPQYMIGSGNNKDCEEWFFDRIVRGRPV 262



 Score = 46.6 bits (109), Expect(3) = 4e-16
 Identities = 22/30 (73%), Positives = 26/30 (86%)
 Frame = -3

Query: 513 NISHVRDLSSMLTSAVEDPIVSSGKIFNYV 424
           NISHVRDLSSMLT AV++P  +SG+IFN V
Sbjct: 273 NISHVRDLSSMLTLAVQNPAAASGRIFNCV 302



 Score = 20.4 bits (41), Expect(3) = 4e-16
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -1

Query: 539 IPGSGMQL 516
           IPGSGMQL
Sbjct: 264 IPGSGMQL 271


>ref|XP_002302114.1| predicted protein [Populus trichocarpa] gi|222843840|gb|EEE81387.1|
           predicted protein [Populus trichocarpa]
          Length = 404

 Score = 65.5 bits (158), Expect(3) = 4e-16
 Identities = 30/49 (61%), Positives = 35/49 (71%)
 Frame = -2

Query: 670 VDKYIADVFSRWAEFLP*HIIGSGNIKDCEEWFFHRIVHD*PVEFRDQG 524
           V+KYIA++FS WA F P ++IGSGN KDCEEWFF RIV   PV     G
Sbjct: 217 VEKYIAEIFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRKRPVPIPGSG 265



 Score = 44.3 bits (103), Expect(3) = 4e-16
 Identities = 21/30 (70%), Positives = 25/30 (83%)
 Frame = -3

Query: 513 NISHVRDLSSMLTSAVEDPIVSSGKIFNYV 424
           NI+H RDLSSMLT AVE+P  +SG+IFN V
Sbjct: 270 NIAHARDLSSMLTLAVENPEAASGRIFNCV 299



 Score = 20.4 bits (41), Expect(3) = 4e-16
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -1

Query: 539 IPGSGMQL 516
           IPGSGMQL
Sbjct: 261 IPGSGMQL 268


>gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotiana tabacum]
          Length = 405

 Score = 63.9 bits (154), Expect(3) = 5e-16
 Identities = 28/49 (57%), Positives = 34/49 (69%)
 Frame = -2

Query: 670 VDKYIADVFSRWAEFLP*HIIGSGNIKDCEEWFFHRIVHD*PVEFRDQG 524
           V+KYI+++F  WA F P ++IGSGN KDCEEWFF RIV   PV     G
Sbjct: 218 VEKYISEIFDSWASFRPQYMIGSGNNKDCEEWFFDRIVRGRPVPIPGSG 266



 Score = 45.4 bits (106), Expect(3) = 5e-16
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = -3

Query: 513 NISHVRDLSSMLTSAVEDPIVSSGKIFNYV 424
           NI+HVRDLSSMLT+AV++P  +SG IFN V
Sbjct: 271 NIAHVRDLSSMLTAAVQNPAAASGHIFNCV 300



 Score = 20.4 bits (41), Expect(3) = 5e-16
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -1

Query: 539 IPGSGMQL 516
           IPGSGMQL
Sbjct: 262 IPGSGMQL 269